RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 PLEKHO1Q53GL0 409 aaPredicted RBP12.83□□□□□ -0.36
TRBV20-1-201ENST00000390394 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
TRBV20-1-201ENST00000390394 DDB1Q16531 1140 aa12.82□□□□□ -0.36
TRBV20-1-201ENST00000390394 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
TRBV20-1-201ENST00000390394 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
TRBV20-1-201ENST00000390394 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
TRBV20-1-201ENST00000390394 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
TRBV20-1-201ENST00000390394 HMOX1P09601 288 aa12.81□□□□□ -0.36
TRBV20-1-201ENST00000390394 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
TRBV20-1-201ENST00000390394 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
TRBV20-1-201ENST00000390394 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
TRBV20-1-201ENST00000390394 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
TRBV20-1-201ENST00000390394 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
TRBV20-1-201ENST00000390394 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
TRBV20-1-201ENST00000390394 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
TRBV20-1-201ENST00000390394 BRWD3Q6RI45 1802 aa12.8□□□□□ -0.36
TRBV20-1-201ENST00000390394 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 GLI3P10071 1580 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
TRBV20-1-201ENST00000390394 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
TRBV20-1-201ENST00000390394 RGPD2P0DJD1 1756 aa12.78□□□□□ -0.36
TRBV20-1-201ENST00000390394 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
TRBV20-1-201ENST00000390394 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.37
TRBV20-1-201ENST00000390394 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
TRBV20-1-201ENST00000390394 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
TRBV20-1-201ENST00000390394 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
TRBV20-1-201ENST00000390394 KRT27Q7Z3Y8 459 aa12.76□□□□□ -0.37
TRBV20-1-201ENST00000390394 MEGF6O75095 1541 aa12.76□□□□□ -0.37
TRBV20-1-201ENST00000390394 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 AKAP4Q5JQC9 854 aa12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 THSD7AQ9UPZ6 1657 aa12.75□□□□□ -0.37
TRBV20-1-201ENST00000390394 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
TRBV20-1-201ENST00000390394 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
TRBV20-1-201ENST00000390394 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
TRBV20-1-201ENST00000390394 NFE2L2Q16236 605 aa12.73□□□□□ -0.37
TRBV20-1-201ENST00000390394 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
TRBV20-1-201ENST00000390394 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
TRBV20-1-201ENST00000390394 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
TRBV20-1-201ENST00000390394 PHKG2P15735 406 aa12.72□□□□□ -0.37
TRBV20-1-201ENST00000390394 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
TRBV20-1-201ENST00000390394 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
TRBV20-1-201ENST00000390394 MAP3K5Q99683 1374 aa12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 LRRC37A3O60309 1634 aa12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 RIPK4P57078 832 aa12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
TRBV20-1-201ENST00000390394 BCL9O00512 1426 aa12.71□□□□□ -0.38
TRBV20-1-201ENST00000390394 CYP27B1O15528 508 aa12.7□□□□□ -0.38
TRBV20-1-201ENST00000390394 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
TRBV20-1-201ENST00000390394 APAF1O14727 1248 aa12.69□□□□□ -0.38
TRBV20-1-201ENST00000390394 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
TRBV20-1-201ENST00000390394 TEFQ10587 303 aa12.68□□□□□ -0.38
TRBV20-1-201ENST00000390394 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
TRBV20-1-201ENST00000390394 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
TRBV20-1-201ENST00000390394 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
TRBV20-1-201ENST00000390394 RNMTO43148 476 aaKnown RBP12.66□□□□□ -0.38
TRBV20-1-201ENST00000390394 CABP4P57796 275 aa12.66□□□□□ -0.38
TRBV20-1-201ENST00000390394 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
TRBV20-1-201ENST00000390394 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
TRBV20-1-201ENST00000390394 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
TRBV20-1-201ENST00000390394 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
TRBV20-1-201ENST00000390394 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
TRBV20-1-201ENST00000390394 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
TRBV20-1-201ENST00000390394 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
TRBV20-1-201ENST00000390394 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
TRBV20-1-201ENST00000390394 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
TRBV20-1-201ENST00000390394 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
TRBV20-1-201ENST00000390394 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
TRBV20-1-201ENST00000390394 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
TRBV20-1-201ENST00000390394 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
TRBV20-1-201ENST00000390394 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
TRBV20-1-201ENST00000390394 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 MCM10Q7L590 875 aa12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 KDM6AO15550 1401 aaPredicted RBP12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 IL16Q14005 1332 aa12.62□□□□□ -0.39
TRBV20-1-201ENST00000390394 GNAI1P63096 354 aa12.61□□□□□ -0.39
TRBV20-1-201ENST00000390394 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
TRBV20-1-201ENST00000390394 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
TRBV20-1-201ENST00000390394 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
TRBV20-1-201ENST00000390394 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
TRBV20-1-201ENST00000390394 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms