RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
TRBV3-1-201ENST00000390387 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
TRBV3-1-201ENST00000390387 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
TRBV3-1-201ENST00000390387 MEGF6O75095 1541 aa13.18□□□□□ -0.3
TRBV3-1-201ENST00000390387 PNPLA7Q6ZV29 1317 aa13.18□□□□□ -0.3
TRBV3-1-201ENST00000390387 SLC16A10Q8TF71 515 aa13.18□□□□□ -0.3
TRBV3-1-201ENST00000390387 COG3Q96JB2 828 aa13.18□□□□□ -0.3
TRBV3-1-201ENST00000390387 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
TRBV3-1-201ENST00000390387 COL24A1Q17RW2 1714 aa13.18□□□□□ -0.3
TRBV3-1-201ENST00000390387 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
TRBV3-1-201ENST00000390387 ST20-MTHFSA0A0A6YYL1 179 aa13.17□□□□□ -0.3
TRBV3-1-201ENST00000390387 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
TRBV3-1-201ENST00000390387 KCNQ4P56696 695 aa13.17□□□□□ -0.3
TRBV3-1-201ENST00000390387 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
TRBV3-1-201ENST00000390387 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
TRBV3-1-201ENST00000390387 LY75O60449 1722 aa13.16□□□□□ -0.3
TRBV3-1-201ENST00000390387 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
TRBV3-1-201ENST00000390387 CHD4Q14839 1912 aa13.16□□□□□ -0.3
TRBV3-1-201ENST00000390387 AMPHP49418 695 aa13.16□□□□□ -0.3
TRBV3-1-201ENST00000390387 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
TRBV3-1-201ENST00000390387 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
TRBV3-1-201ENST00000390387 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
TRBV3-1-201ENST00000390387 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
TRBV3-1-201ENST00000390387 POLD1P28340 1107 aa13.14□□□□□ -0.31
TRBV3-1-201ENST00000390387 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
TRBV3-1-201ENST00000390387 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
TRBV3-1-201ENST00000390387 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
TRBV3-1-201ENST00000390387 GPR162Q16538 588 aa13.13□□□□□ -0.31
TRBV3-1-201ENST00000390387 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
TRBV3-1-201ENST00000390387 FYB1O15117 783 aa13.12□□□□□ -0.31
TRBV3-1-201ENST00000390387 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
TRBV3-1-201ENST00000390387 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
TRBV3-1-201ENST00000390387 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
TRBV3-1-201ENST00000390387 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
TRBV3-1-201ENST00000390387 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
TRBV3-1-201ENST00000390387 USP47Q96K76 1375 aa13.11□□□□□ -0.31
TRBV3-1-201ENST00000390387 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
TRBV3-1-201ENST00000390387 C1QTNF8P60827 252 aa13.1□□□□□ -0.31
TRBV3-1-201ENST00000390387 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
TRBV3-1-201ENST00000390387 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
TRBV3-1-201ENST00000390387 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
TRBV3-1-201ENST00000390387 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
TRBV3-1-201ENST00000390387 INSRP06213 1382 aa13.08□□□□□ -0.31
TRBV3-1-201ENST00000390387 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
TRBV3-1-201ENST00000390387 TMF1P82094 1093 aa13.08□□□□□ -0.32
TRBV3-1-201ENST00000390387 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
TRBV3-1-201ENST00000390387 C5P01031 1676 aa13.08□□□□□ -0.32
TRBV3-1-201ENST00000390387 FLT4P35916 1363 aa13.07□□□□□ -0.32
TRBV3-1-201ENST00000390387 CEP350Q5VT06 3117 aa13.07□□□□□ -0.32
TRBV3-1-201ENST00000390387 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
TRBV3-1-201ENST00000390387 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
TRBV3-1-201ENST00000390387 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
TRBV3-1-201ENST00000390387 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
TRBV3-1-201ENST00000390387 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
TRBV3-1-201ENST00000390387 TOGARAM1Q9Y4F4 1720 aa13.06□□□□□ -0.32
TRBV3-1-201ENST00000390387 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRBV3-1-201ENST00000390387 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
TRBV3-1-201ENST00000390387 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
TRBV3-1-201ENST00000390387 CYP27B1O15528 508 aa13.05□□□□□ -0.32
TRBV3-1-201ENST00000390387 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
TRBV3-1-201ENST00000390387 EMILIN1Q9Y6C2 1016 aa13.04□□□□□ -0.32
TRBV3-1-201ENST00000390387 PKD1L3Q7Z443 1732 aa13.04□□□□□ -0.32
TRBV3-1-201ENST00000390387 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
TRBV3-1-201ENST00000390387 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
TRBV3-1-201ENST00000390387 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
TRBV3-1-201ENST00000390387 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
TRBV3-1-201ENST00000390387 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
TRBV3-1-201ENST00000390387 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
TRBV3-1-201ENST00000390387 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
TRBV3-1-201ENST00000390387 CDCA8Q53HL2 280 aa13.02□□□□□ -0.33
TRBV3-1-201ENST00000390387 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
TRBV3-1-201ENST00000390387 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
TRBV3-1-201ENST00000390387 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.33
TRBV3-1-201ENST00000390387 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
TRBV3-1-201ENST00000390387 ANKRD26Q9UPS8 1709 aa13.01□□□□□ -0.33
TRBV3-1-201ENST00000390387 ITGB4P16144 1822 aa13.01□□□□□ -0.33
TRBV3-1-201ENST00000390387 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
TRBV3-1-201ENST00000390387 PIGBQ92521 554 aa13□□□□□ -0.33
TRBV3-1-201ENST00000390387 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
TRBV3-1-201ENST00000390387 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
TRBV3-1-201ENST00000390387 SMIM5Q71RC9 77 aa12.99□□□□□ -0.33
TRBV3-1-201ENST00000390387 AK7Q96M32 723 aa12.99□□□□□ -0.33
TRBV3-1-201ENST00000390387 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
TRBV3-1-201ENST00000390387 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
TRBV3-1-201ENST00000390387 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
TRBV3-1-201ENST00000390387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
TRBV3-1-201ENST00000390387 ADCY9O60503 1353 aa12.97□□□□□ -0.33
TRBV3-1-201ENST00000390387 PPM1GO15355 546 aaPredicted RBP12.97□□□□□ -0.33
TRBV3-1-201ENST00000390387 PHF14O94880 888 aa12.97□□□□□ -0.33
TRBV3-1-201ENST00000390387 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
TRBV3-1-201ENST00000390387 EYA1Q99502 592 aa12.97□□□□□ -0.33
TRBV3-1-201ENST00000390387 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
TRBV3-1-201ENST00000390387 LOC102724428A0A0B4J2F2 783 aa12.96□□□□□ -0.33
TRBV3-1-201ENST00000390387 SSFA2P28290 1259 aa12.96□□□□□ -0.33
TRBV3-1-201ENST00000390387 SIK1P57059 783 aa12.96□□□□□ -0.33
TRBV3-1-201ENST00000390387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRBV3-1-201ENST00000390387 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
TRBV3-1-201ENST00000390387 PHKG2P15735 406 aa12.95□□□□□ -0.34
TRBV3-1-201ENST00000390387 ITPK1Q13572 414 aa12.95□□□□□ -0.34
TRBV3-1-201ENST00000390387 TMOD3Q9NYL9 352 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms