RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 PCDH11YQ9BZA8 1340 aa11.55□□□□□ -0.56
TRBV6-1-201ENST00000390353 FLT4P35916 1363 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 CASZ1Q86V15 1759 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 RRS1Q15050 365 aaKnown RBP11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 LRRC4BQ9NT99 713 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 CLSPNQ9HAW4 1339 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 LTN1O94822 1766 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 INSRP06213 1382 aa11.54□□□□□ -0.56
TRBV6-1-201ENST00000390353 ZNF827Q17R98 1081 aa11.53□□□□□ -0.56
TRBV6-1-201ENST00000390353 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
TRBV6-1-201ENST00000390353 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
TRBV6-1-201ENST00000390353 CCNL1Q9UK58 526 aaPredicted RBP11.53□□□□□ -0.56
TRBV6-1-201ENST00000390353 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
TRBV6-1-201ENST00000390353 FLAD1Q8NFF5 587 aa11.52□□□□□ -0.57
TRBV6-1-201ENST00000390353 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
TRBV6-1-201ENST00000390353 MEGF6O75095 1541 aa11.5□□□□□ -0.57
TRBV6-1-201ENST00000390353 FBLN1P23142 703 aa11.5□□□□□ -0.57
TRBV6-1-201ENST00000390353 GPR162Q16538 588 aa11.5□□□□□ -0.57
TRBV6-1-201ENST00000390353 HSP90AB2PQ58FF8 381 aa11.5□□□□□ -0.57
TRBV6-1-201ENST00000390353 SPG7Q9UQ90 795 aa11.5□□□□□ -0.57
TRBV6-1-201ENST00000390353 PNPLA7Q6ZV29 1317 aa11.5□□□□□ -0.57
TRBV6-1-201ENST00000390353 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
TRBV6-1-201ENST00000390353 MSH5O43196 834 aa11.49□□□□□ -0.57
TRBV6-1-201ENST00000390353 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
TRBV6-1-201ENST00000390353 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
TRBV6-1-201ENST00000390353 NSD2O96028 1365 aa11.49□□□□□ -0.57
TRBV6-1-201ENST00000390353 MYOM1P52179 1685 aa11.49□□□□□ -0.57
TRBV6-1-201ENST00000390353 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
TRBV6-1-201ENST00000390353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRBV6-1-201ENST00000390353 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
TRBV6-1-201ENST00000390353 BTAF1O14981 1849 aa11.48□□□□□ -0.57
TRBV6-1-201ENST00000390353 PLEKHG2Q9H7P9 1386 aa11.47□□□□□ -0.57
TRBV6-1-201ENST00000390353 WASHC2AQ641Q2 1341 aa11.47□□□□□ -0.57
TRBV6-1-201ENST00000390353 GRIN3BO60391 1043 aa11.47□□□□□ -0.57
TRBV6-1-201ENST00000390353 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
TRBV6-1-201ENST00000390353 PALLDQ8WX93 1383 aa11.46□□□□□ -0.57
TRBV6-1-201ENST00000390353 MPRIPQ6WCQ1 1025 aa11.46□□□□□ -0.57
TRBV6-1-201ENST00000390353 CARD14Q9BXL6 1004 aa11.46□□□□□ -0.57
TRBV6-1-201ENST00000390353 KCNQ4P56696 695 aa11.45□□□□□ -0.58
TRBV6-1-201ENST00000390353 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
TRBV6-1-201ENST00000390353 AK7Q96M32 723 aa11.45□□□□□ -0.58
TRBV6-1-201ENST00000390353 EMILIN1Q9Y6C2 1016 aa11.45□□□□□ -0.58
TRBV6-1-201ENST00000390353 CYP27B1O15528 508 aa11.44□□□□□ -0.58
TRBV6-1-201ENST00000390353 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
TRBV6-1-201ENST00000390353 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
TRBV6-1-201ENST00000390353 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRBV6-1-201ENST00000390353 COL23A1Q86Y22 540 aaPredicted RBP11.43□□□□□ -0.58
TRBV6-1-201ENST00000390353 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
TRBV6-1-201ENST00000390353 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
TRBV6-1-201ENST00000390353 HSP90AB1P08238 724 aaKnown RBP11.42□□□□□ -0.58
TRBV6-1-201ENST00000390353 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
TRBV6-1-201ENST00000390353 PCGF6Q9BYE7 350 aa11.42□□□□□ -0.58
TRBV6-1-201ENST00000390353 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 KAT6BQ8WYB5 2073 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 SSFA2P28290 1259 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 PIGBQ92521 554 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 EYA1Q99502 592 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 POLKQ9UBT6 870 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 NCAPD2Q15021 1401 aa11.41□□□□□ -0.58
TRBV6-1-201ENST00000390353 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
TRBV6-1-201ENST00000390353 SIK1P57059 783 aa11.4□□□□□ -0.58
TRBV6-1-201ENST00000390353 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
TRBV6-1-201ENST00000390353 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
TRBV6-1-201ENST00000390353 PHKG2P15735 406 aa11.39□□□□□ -0.59
TRBV6-1-201ENST00000390353 AMOTQ4VCS5 1084 aa11.39□□□□□ -0.59
TRBV6-1-201ENST00000390353 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
TRBV6-1-201ENST00000390353 NLGN2Q8NFZ4 835 aa11.39□□□□□ -0.59
TRBV6-1-201ENST00000390353 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
TRBV6-1-201ENST00000390353 LY75O60449 1722 aa11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 UTRNP46939 3433 aa11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 ERVV-2B6SEH9 535 aa11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 ATP6V1AP38606 617 aa11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 DCAF5Q96JK2 942 aa11.38□□□□□ -0.59
TRBV6-1-201ENST00000390353 PHF14O94880 888 aa11.37□□□□□ -0.59
TRBV6-1-201ENST00000390353 C1QTNF8P60827 252 aa11.37□□□□□ -0.59
TRBV6-1-201ENST00000390353 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
TRBV6-1-201ENST00000390353 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
TRBV6-1-201ENST00000390353 IGSF1Q8N6C5 1336 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 GNPATO15228 680 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 ADRA2BP18089 450 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 MORC1Q86VD1 984 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 CCER1Q8TC90 406 aaPredicted RBP11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 PANK3Q9H999 370 aa11.36□□□□□ -0.59
TRBV6-1-201ENST00000390353 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
TRBV6-1-201ENST00000390353 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
TRBV6-1-201ENST00000390353 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRBV6-1-201ENST00000390353 CABP4P57796 275 aa11.35□□□□□ -0.59
TRBV6-1-201ENST00000390353 ASAP1Q9ULH1 1129 aa11.35□□□□□ -0.59
TRBV6-1-201ENST00000390353 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
TRBV6-1-201ENST00000390353 C5P01031 1676 aa11.34□□□□□ -0.59
TRBV6-1-201ENST00000390353 TRAPPC3LQ5T215 181 aa11.34□□□□□ -0.59
TRBV6-1-201ENST00000390353 NLGN1Q8N2Q7 840 aa11.34□□□□□ -0.59
TRBV6-1-201ENST00000390353 LINC00116Q8NCU8 138 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms