RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 SGIP1Q9BQI5 828 aa26.15■■□□□ 1.78
TMEM41A-202ENST00000382227 TIMELESSQ9UNS1 1208 aa26.14■■□□□ 1.78
TMEM41A-202ENST00000382227 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
TMEM41A-202ENST00000382227 SHANK3Q9BYB0 1731 aa26.12■■□□□ 1.77
TMEM41A-202ENST00000382227 USHBP1Q8N6Y0 703 aa26.12■■□□□ 1.77
TMEM41A-202ENST00000382227 FHDC1Q9C0D6 1143 aaPredicted RBP26.12■■□□□ 1.77
TMEM41A-202ENST00000382227 CGNL1Q0VF96 1302 aa26.12■■□□□ 1.77
TMEM41A-202ENST00000382227 DOT1LQ8TEK3 1739 aa26.11■■□□□ 1.77
TMEM41A-202ENST00000382227 INSRP06213 1382 aa26.11■■□□□ 1.77
TMEM41A-202ENST00000382227 AKT1S1Q96B36 256 aa26.11■■□□□ 1.77
TMEM41A-202ENST00000382227 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
TMEM41A-202ENST00000382227 NSD2O96028 1365 aa26.1■■□□□ 1.77
TMEM41A-202ENST00000382227 HSP90AB2PQ58FF8 381 aa26.1■■□□□ 1.77
TMEM41A-202ENST00000382227 RAPGEF4Q8WZA2 1011 aa26.1■■□□□ 1.77
TMEM41A-202ENST00000382227 SYT17Q9BSW7 474 aa26.1■■□□□ 1.77
TMEM41A-202ENST00000382227 CARD14Q9BXL6 1004 aa26.1■■□□□ 1.77
TMEM41A-202ENST00000382227 FLT4P35916 1363 aa26.09■■□□□ 1.77
TMEM41A-202ENST00000382227 KIF24Q5T7B8 1368 aa26.09■■□□□ 1.77
TMEM41A-202ENST00000382227 KCNQ4P56696 695 aa26.07■■□□□ 1.76
TMEM41A-202ENST00000382227 ARXQ96QS3 562 aa26.07■■□□□ 1.76
TMEM41A-202ENST00000382227 NSD3Q9BZ95 1437 aa26.06■■□□□ 1.76
TMEM41A-202ENST00000382227 TATP17735 454 aaPredicted RBP26.06■■□□□ 1.76
TMEM41A-202ENST00000382227 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
TMEM41A-202ENST00000382227 SLC16A10Q8TF71 515 aa26.05■■□□□ 1.76
TMEM41A-202ENST00000382227 TFCP2L1Q9NZI6 479 aa26.04■■□□□ 1.76
TMEM41A-202ENST00000382227 LY75O60449 1722 aa26.04■■□□□ 1.76
TMEM41A-202ENST00000382227 QSER1Q2KHR3 1735 aa26.03■■□□□ 1.76
TMEM41A-202ENST00000382227 EMILIN1Q9Y6C2 1016 aa26.03■■□□□ 1.76
TMEM41A-202ENST00000382227 PNPLA7Q6ZV29 1317 aa26.03■■□□□ 1.76
TMEM41A-202ENST00000382227 CCNL1Q9UK58 526 aaPredicted RBP26.02■■□□□ 1.76
TMEM41A-202ENST00000382227 PCDH11XQ9BZA7 1347 aa26.02■■□□□ 1.76
TMEM41A-202ENST00000382227 PCDH11YQ9BZA8 1340 aa26.02■■□□□ 1.76
TMEM41A-202ENST00000382227 MAP3K5Q99683 1374 aa26.02■■□□□ 1.76
TMEM41A-202ENST00000382227 PCGF6Q9BYE7 350 aa26.01■■□□□ 1.75
TMEM41A-202ENST00000382227 PPM1GO15355 546 aaPredicted RBP25.97■■□□□ 1.75
TMEM41A-202ENST00000382227 POLD1P28340 1107 aa25.97■■□□□ 1.75
TMEM41A-202ENST00000382227 TUBGCP6Q96RT7 1819 aa25.96■■□□□ 1.75
TMEM41A-202ENST00000382227 CYP27B1O15528 508 aa25.96■■□□□ 1.75
TMEM41A-202ENST00000382227 NCAPD2Q15021 1401 aa25.95■■□□□ 1.74
TMEM41A-202ENST00000382227 WASHC2AQ641Q2 1341 aa25.94■■□□□ 1.74
TMEM41A-202ENST00000382227 COL24A1Q17RW2 1714 aa25.94■■□□□ 1.74
TMEM41A-202ENST00000382227 ANKRD26Q9UPS8 1709 aa25.94■■□□□ 1.74
TMEM41A-202ENST00000382227 MPRIPQ6WCQ1 1025 aa25.92■■□□□ 1.74
TMEM41A-202ENST00000382227 POLR3GLQ9BT43 218 aa25.92■■□□□ 1.74
TMEM41A-202ENST00000382227 PALLDQ8WX93 1383 aa25.92■■□□□ 1.74
TMEM41A-202ENST00000382227 KLHL34Q8N239 644 aa25.91■■□□□ 1.74
TMEM41A-202ENST00000382227 PKD1L3Q7Z443 1732 aa25.91■■□□□ 1.74
TMEM41A-202ENST00000382227 HMGB2P26583 209 aaKnown RBP25.9■■□□□ 1.74
TMEM41A-202ENST00000382227 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
TMEM41A-202ENST00000382227 POLKQ9UBT6 870 aa25.9■■□□□ 1.74
TMEM41A-202ENST00000382227 MSH5O43196 834 aa25.89■■□□□ 1.74
TMEM41A-202ENST00000382227 EYA1Q99502 592 aa25.89■■□□□ 1.74
TMEM41A-202ENST00000382227 SPG7Q9UQ90 795 aa25.89■■□□□ 1.74
TMEM41A-202ENST00000382227 NKX1-1Q15270 411 aaPredicted RBP25.88■■□□□ 1.73
TMEM41A-202ENST00000382227 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
TMEM41A-202ENST00000382227 C5P01031 1676 aa25.87■■□□□ 1.73
TMEM41A-202ENST00000382227 EIF4G2P78344 907 aaKnown RBP eCLIP25.87■■□□□ 1.73
TMEM41A-202ENST00000382227 SMARCC1Q92922 1105 aaPredicted RBP25.87■■□□□ 1.73
TMEM41A-202ENST00000382227 MAP2P11137 1827 aaKnown RBP25.86■■□□□ 1.73
TMEM41A-202ENST00000382227 GPR162Q16538 588 aa25.86■■□□□ 1.73
TMEM41A-202ENST00000382227 ZNF784Q8NCA9 323 aaPredicted RBP25.86■■□□□ 1.73
TMEM41A-202ENST00000382227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.86■■□□□ 1.73
TMEM41A-202ENST00000382227 PIGBQ92521 554 aa25.85■■□□□ 1.73
TMEM41A-202ENST00000382227 TNNT2P45379 298 aaPredicted RBP25.84■■□□□ 1.73
TMEM41A-202ENST00000382227 ITGB4P16144 1822 aa25.84■■□□□ 1.73
TMEM41A-202ENST00000382227 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
TMEM41A-202ENST00000382227 FLAD1Q8NFF5 587 aa25.83■■□□□ 1.73
TMEM41A-202ENST00000382227 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
TMEM41A-202ENST00000382227 NLGN2Q8NFZ4 835 aa25.82■■□□□ 1.72
TMEM41A-202ENST00000382227 TAF1LQ8IZX4 1826 aa25.81■■□□□ 1.72
TMEM41A-202ENST00000382227 CHD4Q14839 1912 aa25.81■■□□□ 1.72
TMEM41A-202ENST00000382227 MSL1Q68DK7 614 aa25.81■■□□□ 1.72
TMEM41A-202ENST00000382227 PANK3Q9H999 370 aa25.8■■□□□ 1.72
TMEM41A-202ENST00000382227 IFNL2Q8IZJ0 200 aa25.79■■□□□ 1.72
TMEM41A-202ENST00000382227 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
TMEM41A-202ENST00000382227 AK7Q96M32 723 aa25.79■■□□□ 1.72
TMEM41A-202ENST00000382227 C4BP0C0L5 1744 aa25.79■■□□□ 1.72
TMEM41A-202ENST00000382227 PHKG2P15735 406 aa25.78■■□□□ 1.72
TMEM41A-202ENST00000382227 TMOD3Q9NYL9 352 aa25.78■■□□□ 1.72
TMEM41A-202ENST00000382227 PLEKHG2Q9H7P9 1386 aa25.77■■□□□ 1.72
TMEM41A-202ENST00000382227 UTRNP46939 3433 aa25.76■■□□□ 1.71
TMEM41A-202ENST00000382227 LOC102724428A0A0B4J2F2 783 aa25.76■■□□□ 1.71
TMEM41A-202ENST00000382227 SIK1P57059 783 aa25.76■■□□□ 1.71
TMEM41A-202ENST00000382227 CCER1Q8TC90 406 aaPredicted RBP25.76■■□□□ 1.71
TMEM41A-202ENST00000382227 IGSF1Q8N6C5 1336 aa25.74■■□□□ 1.71
TMEM41A-202ENST00000382227 AMIGO3Q86WK7 504 aa25.74■■□□□ 1.71
TMEM41A-202ENST00000382227 ASAP1Q9ULH1 1129 aa25.74■■□□□ 1.71
TMEM41A-202ENST00000382227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.72■■□□□ 1.71
TMEM41A-202ENST00000382227 PHF14O94880 888 aa25.72■■□□□ 1.71
TMEM41A-202ENST00000382227 LINC00116Q8NCU8 138 aa25.72■■□□□ 1.71
TMEM41A-202ENST00000382227 CD2APQ9Y5K6 639 aa25.72■■□□□ 1.71
TMEM41A-202ENST00000382227 UBR3Q6ZT12 1888 aa25.7■■□□□ 1.71
TMEM41A-202ENST00000382227 YBX3P16989 372 aaKnown RBP eCLIP25.7■■□□□ 1.74e-6■□□□□ 8.3
TMEM41A-202ENST00000382227 SSFA2P28290 1259 aa25.7■■□□□ 1.7
TMEM41A-202ENST00000382227 SMIM5Q71RC9 77 aa25.7■■□□□ 1.7
TMEM41A-202ENST00000382227 GRIN3BO60391 1043 aa25.69■■□□□ 1.7
TMEM41A-202ENST00000382227 ATP6V1AP38606 617 aa25.69■■□□□ 1.7
TMEM41A-202ENST00000382227 ITPK1Q13572 414 aa25.69■■□□□ 1.7
TMEM41A-202ENST00000382227 MORC1Q86VD1 984 aa25.69■■□□□ 1.7
TMEM41A-202ENST00000382227 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms