RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
RFC1-202ENST00000381897 ZHX1Q9UKY1 873 aaPredicted RBP6.82□□□□□ -1.32
RFC1-202ENST00000381897 EIF2AK4Q9P2K8 1649 aaKnown RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 IBTKQ9P2D0 1353 aaPredicted RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 AP1G2O75843 785 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 NBPF7P0C2Y1 421 aaPredicted RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 ATP2B1P20020 1258 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 SHQ1Q6PI26 577 aaKnown RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 DNMT1P26358 1616 aaKnown RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 ZNF608Q9ULD9 1512 aaPredicted RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 ATP6V1E1P36543 226 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 NBPF1Q3BBV0 1214 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 ANKRD45Q5TZF3 282 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 RNF216Q9NWF9 866 aaPredicted RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 TRIM29Q14134 588 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 KCNV2Q8TDN2 545 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 SMAD5Q99717 465 aaKnown RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 PIK3C2GO75747 1445 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 PES1O00541 588 aaKnown RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 UVSSAQ2YD98 709 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 DPF3Q92784 378 aa6.81□□□□□ -1.32
RFC1-202ENST00000381897 TSPYL2Q9H2G4 693 aaPredicted RBP6.81□□□□□ -1.32
RFC1-202ENST00000381897 GOLGA6L4A6NEF3 574 aa6.8□□□□□ -1.32
RFC1-202ENST00000381897 STK10O94804 968 aaKnown RBP6.8□□□□□ -1.32
RFC1-202ENST00000381897 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
RFC1-202ENST00000381897 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
RFC1-202ENST00000381897 NUP160Q12769 1436 aa6.8□□□□□ -1.32
RFC1-202ENST00000381897 PRG4Q92954 1404 aaPredicted RBP6.8□□□□□ -1.32
RFC1-202ENST00000381897 PRPF40AO75400 957 aaKnown RBP6.8□□□□□ -1.32
RFC1-202ENST00000381897 DMTNQ08495 405 aa6.8□□□□□ -1.32
RFC1-202ENST00000381897 PNMA1Q8ND90 353 aa6.8□□□□□ -1.32
RFC1-202ENST00000381897 MICAL1Q8TDZ2 1067 aa6.8□□□□□ -1.32
RFC1-202ENST00000381897 COL17A1Q9UMD9 1497 aaPredicted RBP6.8□□□□□ -1.32
RFC1-202ENST00000381897 BAG4O95429 457 aaKnown RBP6.8□□□□□ -1.32
RFC1-202ENST00000381897 ZNF445P59923 1031 aa6.8□□□□□ -1.32
RFC1-202ENST00000381897 ZRSR1Q15695 479 aaKnown RBP6.79□□□□□ -1.32
RFC1-202ENST00000381897 ZSCAN23Q3MJ62 389 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 MBD5Q9P267 1494 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 RARSP54136 660 aaKnown RBP6.79□□□□□ -1.32
RFC1-202ENST00000381897 HDAC1Q13547 482 aaPredicted RBP6.79□□□□□ -1.32
RFC1-202ENST00000381897 HS6ST3Q8IZP7 471 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 CALCOCO1Q9P1Z2 691 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 C9orf84Q5VXU9 1444 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 ITSN2Q9NZM3 1697 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 PYGBP11216 843 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 GPS2Q13227 327 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 POLA2Q14181 598 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 TROQ12816 1431 aaPredicted RBP6.79□□□□□ -1.32
RFC1-202ENST00000381897 CBX1P83916 185 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 SLMAPQ14BN4 828 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 PPP4R3BQ5MIZ7 849 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 SCLT1Q96NL6 688 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 TRIM55Q9BYV6 548 aa6.79□□□□□ -1.32
RFC1-202ENST00000381897 CGNQ9P2M7 1197 aaKnown RBP6.79□□□□□ -1.32
RFC1-202ENST00000381897 RNF40O75150 1001 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 HMMRO75330 724 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 FEZ1Q99689 392 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 SPOCK3Q9BQ16 436 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 PLEKHH1Q9ULM0 1364 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 PZPP20742 1482 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 SEC24BO95487 1268 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 RNF20Q5VTR2 975 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 DDX12PQ92771 950 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 LNPKQ9C0E8 428 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 VTI1BQ9UEU0 232 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 SAMD9Q5K651 1589 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 ASXL1Q8IXJ9 1541 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 FGD1P98174 961 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 CHD1LQ86WJ1 897 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 MYRIPQ8NFW9 859 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 CWC15Q9P013 229 aaKnown RBP6.78□□□□□ -1.32
RFC1-202ENST00000381897 SSFA2P28290 1259 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 PDE4DQ08499 809 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 BMP2KLQ5H9B9 411 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 LCA5Q86VQ0 697 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 NUTM1Q86Y26 1132 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 PPP1R14AQ96A00 147 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 ARHGEF11O15085 1522 aa6.78□□□□□ -1.32
RFC1-202ENST00000381897 BMS1Q14692 1282 aaKnown RBP6.77□□□□□ -1.33
RFC1-202ENST00000381897 NOM1Q5C9Z4 860 aaKnown RBP6.77□□□□□ -1.33
RFC1-202ENST00000381897 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 HDAC9Q9UKV0 1011 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 KSR2Q6VAB6 950 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 RNF214Q8ND24 703 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 VPS37AQ8NEZ2 397 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 ZNF622Q969S3 477 aaKnown RBP eCLIP6.77□□□□□ -1.331e-7■■□□□ 14.5
RFC1-202ENST00000381897 ARGLU1Q9NWB6 273 aaPredicted RBP6.77□□□□□ -1.33
RFC1-202ENST00000381897 RRP7AQ9Y3A4 280 aaKnown RBP6.77□□□□□ -1.33
RFC1-202ENST00000381897 SLC4A7Q9Y6M7 1214 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 CCDC141Q6ZP82 1450 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 ABCC2Q92887 1545 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 ADGBQ8N7X0 1667 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 ERICH4A6NGS2 130 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 CHGBP05060 677 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 CCND1P24385 295 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 MAPK8P45983 427 aa6.77□□□□□ -1.33
RFC1-202ENST00000381897 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
RFC1-202ENST00000381897 PRAG1Q86YV5 1406 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms