RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 H0YHG0 523 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 STX6O43752 255 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 IGSF3O75054 1194 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 SDSP20132 328 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 RALYLQ86SE5 291 aaKnown RBP13.57□□□□□ -0.24
THUMPD1-201ENST00000381337 ZNF445P59923 1031 aa13.56□□□□□ -0.24
THUMPD1-201ENST00000381337 UGGT2Q9NYU1 1516 aa13.56□□□□□ -0.24
THUMPD1-201ENST00000381337 SRGAP3O43295 1099 aa13.56□□□□□ -0.24
THUMPD1-201ENST00000381337 SFPQP23246 707 aaKnown RBP eCLIP13.56□□□□□ -0.24
THUMPD1-201ENST00000381337 IL16Q14005 1332 aa13.56□□□□□ -0.24
THUMPD1-201ENST00000381337 ZGPATQ8N5A5 531 aaKnown RBP13.56□□□□□ -0.24
THUMPD1-201ENST00000381337 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 SKIDA1Q1XH10 827 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 KRT222Q8N1A0 295 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 PAXBP1Q9Y5B6 917 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 APPP05067 770 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 NEMFO60524 1076 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 ZNF165P49910 485 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 USP48Q86UV5 1035 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 ERC1Q8IUD2 1116 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 CDK19Q9BWU1 502 aa13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
THUMPD1-201ENST00000381337 ERLIN1O75477 346 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 GAS2L3Q86XJ1 694 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 DDX19AQ9NUU7 478 aaKnown RBP13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 CCDC186Q7Z3E2 898 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 ASXL1Q8IXJ9 1541 aa13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 URI1O94763 535 aaPredicted RBP13.54□□□□□ -0.24
THUMPD1-201ENST00000381337 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 PPP1R9BQ96SB3 815 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 DNMBPQ6XZF7 1577 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 NESP48681 1621 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 FAM177BA6PVY3 158 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 TFIP11Q9UBB9 837 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 INSRP06213 1382 aa13.53□□□□□ -0.24
THUMPD1-201ENST00000381337 PIK3C2GO75747 1445 aa13.52□□□□□ -0.24
THUMPD1-201ENST00000381337 KIF20AO95235 890 aa13.52□□□□□ -0.24
THUMPD1-201ENST00000381337 AXDND1Q5T1B0 1012 aaPredicted RBP13.52□□□□□ -0.24
THUMPD1-201ENST00000381337 CEP135Q66GS9 1140 aa13.52□□□□□ -0.24
THUMPD1-201ENST00000381337 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.24
THUMPD1-201ENST00000381337 CBFA2T2O43439 604 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 ADGRF5Q8IZF2 1346 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 POLR3AO14802 1390 aaPredicted RBP13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 JMYQ8N9B5 988 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 ARHGEF11O15085 1522 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 ZMYM4Q5VZL5 1548 aa13.52□□□□□ -0.25
THUMPD1-201ENST00000381337 KIF1BPQ96EK5 621 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 GLRX3O76003 335 aaKnown RBP13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 MYRIPQ8NFW9 859 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 SMTNL1A8MU46 457 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 FEZ1Q99689 392 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
THUMPD1-201ENST00000381337 F6X3S4 739 aa13.5□□□□□ -0.25
THUMPD1-201ENST00000381337 GJB2P29033 226 aa13.5□□□□□ -0.25
THUMPD1-201ENST00000381337 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
THUMPD1-201ENST00000381337 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
THUMPD1-201ENST00000381337 CUL7Q14999 1698 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms