RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 WAPLQ7Z5K2 1190 aa9.94□□□□□ -0.82
TTC39B-203ENST00000380853 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
TTC39B-203ENST00000380853 ABCC11Q96J66 1382 aa9.94□□□□□ -0.82
TTC39B-203ENST00000380853 PLEKHH1Q9ULM0 1364 aa9.94□□□□□ -0.82
TTC39B-203ENST00000380853 PXDNQ92626 1479 aa9.93□□□□□ -0.82
TTC39B-203ENST00000380853 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
TTC39B-203ENST00000380853 DPYSL4O14531 572 aa9.93□□□□□ -0.82
TTC39B-203ENST00000380853 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
TTC39B-203ENST00000380853 RBM6P78332 1123 aaKnown RBP9.93□□□□□ -0.82
TTC39B-203ENST00000380853 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
TTC39B-203ENST00000380853 MARF1Q9Y4F3 1742 aaKnown RBP9.93□□□□□ -0.82
TTC39B-203ENST00000380853 FOXO3O43524 673 aa9.92□□□□□ -0.82
TTC39B-203ENST00000380853 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
TTC39B-203ENST00000380853 EPAS1Q99814 870 aa9.92□□□□□ -0.82
TTC39B-203ENST00000380853 USP21Q9UK80 565 aa9.92□□□□□ -0.82
TTC39B-203ENST00000380853 NRXN1Q9ULB1 1477 aa9.91□□□□□ -0.82
TTC39B-203ENST00000380853 SAFB2Q14151 953 aaKnown RBP eCLIP9.91□□□□□ -0.82
TTC39B-203ENST00000380853 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
TTC39B-203ENST00000380853 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
TTC39B-203ENST00000380853 POGKQ9P215 609 aa9.91□□□□□ -0.82
TTC39B-203ENST00000380853 TRPC5Q9UL62 973 aaPredicted RBP9.91□□□□□ -0.82
TTC39B-203ENST00000380853 HPS5Q9UPZ3 1129 aa9.91□□□□□ -0.82
TTC39B-203ENST00000380853 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
TTC39B-203ENST00000380853 DDX12PQ92771 950 aa9.9□□□□□ -0.82
TTC39B-203ENST00000380853 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.9□□□□□ -0.82
TTC39B-203ENST00000380853 RGPD8O14715 1765 aaPredicted RBP9.9□□□□□ -0.82
TTC39B-203ENST00000380853 DLC1Q96QB1 1528 aa9.9□□□□□ -0.83
TTC39B-203ENST00000380853 ATAD2Q6PL18 1390 aa9.9□□□□□ -0.83
TTC39B-203ENST00000380853 TNS3Q68CZ2 1445 aa9.89□□□□□ -0.83
TTC39B-203ENST00000380853 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
TTC39B-203ENST00000380853 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
TTC39B-203ENST00000380853 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
TTC39B-203ENST00000380853 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
TTC39B-203ENST00000380853 EIF3AQ14152 1382 aaKnown RBP9.89□□□□□ -0.83
TTC39B-203ENST00000380853 ADGRB2O60241 1585 aa9.89□□□□□ -0.83
TTC39B-203ENST00000380853 ATRNO75882 1429 aa9.88□□□□□ -0.83
TTC39B-203ENST00000380853 LMOD2Q6P5Q4 547 aa9.88□□□□□ -0.83
TTC39B-203ENST00000380853 LRCH3Q96II8 777 aa9.88□□□□□ -0.83
TTC39B-203ENST00000380853 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
TTC39B-203ENST00000380853 PSME1Q06323 249 aa9.87□□□□□ -0.83
TTC39B-203ENST00000380853 KRT28Q7Z3Y7 464 aa9.87□□□□□ -0.83
TTC39B-203ENST00000380853 SIRT1Q96EB6 747 aa9.87□□□□□ -0.83
TTC39B-203ENST00000380853 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.87□□□□□ -0.83
TTC39B-203ENST00000380853 SPATA31A3Q5VYP0 1347 aa9.87□□□□□ -0.83
TTC39B-203ENST00000380853 ANKARQ7Z5J8 1434 aa9.87□□□□□ -0.83
TTC39B-203ENST00000380853 ABCA3Q99758 1704 aa9.86□□□□□ -0.83
TTC39B-203ENST00000380853 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
TTC39B-203ENST00000380853 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
TTC39B-203ENST00000380853 ADGRB1O14514 1584 aa9.86□□□□□ -0.83
TTC39B-203ENST00000380853 ARHGEF10O15013 1369 aa9.86□□□□□ -0.83
TTC39B-203ENST00000380853 TSR1Q2NL82 804 aaKnown RBP9.85□□□□□ -0.83
TTC39B-203ENST00000380853 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
TTC39B-203ENST00000380853 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
TTC39B-203ENST00000380853 MINK1Q8N4C8 1332 aaPredicted RBP9.85□□□□□ -0.83
TTC39B-203ENST00000380853 PLCH1Q4KWH8 1693 aa9.85□□□□□ -0.83
TTC39B-203ENST00000380853 ITSN1Q15811 1721 aa9.85□□□□□ -0.83
TTC39B-203ENST00000380853 TULP4Q9NRJ4 1543 aa9.85□□□□□ -0.83
TTC39B-203ENST00000380853 LCE2BO14633 110 aa9.84□□□□□ -0.83
TTC39B-203ENST00000380853 HIRIP3Q9BW71 556 aaPredicted RBP9.84□□□□□ -0.83
TTC39B-203ENST00000380853 CCDC9Q9Y3X0 531 aaKnown RBP9.84□□□□□ -0.83
TTC39B-203ENST00000380853 ARHGEF28Q8N1W1 1705 aaKnown RBP9.84□□□□□ -0.83
TTC39B-203ENST00000380853 SBNO1A3KN83 1393 aa9.84□□□□□ -0.83
TTC39B-203ENST00000380853 GPRASP1Q5JY77 1395 aa9.84□□□□□ -0.83
TTC39B-203ENST00000380853 NBR1Q14596 966 aa9.83□□□□□ -0.84
TTC39B-203ENST00000380853 PMFBP1Q8TBY8 1022 aa9.83□□□□□ -0.84
TTC39B-203ENST00000380853 BCL9LQ86UU0 1499 aa9.83□□□□□ -0.84
TTC39B-203ENST00000380853 NWD2Q9ULI1 1742 aa9.83□□□□□ -0.84
TTC39B-203ENST00000380853 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
TTC39B-203ENST00000380853 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 RALGAPBQ86X10 1494 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 SLIT2O94813 1529 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 MAP3K7O43318 606 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 GLI3P10071 1580 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 MYT1Q01538 1121 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
TTC39B-203ENST00000380853 GJD4Q96KN9 370 aaPredicted RBP9.82□□□□□ -0.84
TTC39B-203ENST00000380853 TRPM3Q9HCF6 1732 aaPredicted RBP9.82□□□□□ -0.84
TTC39B-203ENST00000380853 HRCP23327 699 aa9.81□□□□□ -0.84
TTC39B-203ENST00000380853 NGDNQ8NEJ9 315 aaKnown RBP9.81□□□□□ -0.84
TTC39B-203ENST00000380853 KIAA1210Q9ULL0 1709 aa9.8□□□□□ -0.84
TTC39B-203ENST00000380853 ALS2Q96Q42 1657 aa9.8□□□□□ -0.84
TTC39B-203ENST00000380853 SMAPO00193 183 aa9.8□□□□□ -0.84
TTC39B-203ENST00000380853 WASLO00401 505 aaPredicted RBP9.8□□□□□ -0.84
TTC39B-203ENST00000380853 PPP4CP60510 307 aa9.8□□□□□ -0.84
TTC39B-203ENST00000380853 PACS2Q86VP3 889 aa9.8□□□□□ -0.84
TTC39B-203ENST00000380853 COL14A1Q05707 1796 aaKnown RBP9.79□□□□□ -0.84
TTC39B-203ENST00000380853 NRAPQ86VF7 1730 aa9.79□□□□□ -0.84
TTC39B-203ENST00000380853 GFRA3O60609 400 aa9.79□□□□□ -0.84
TTC39B-203ENST00000380853 SF3B2Q13435 895 aaKnown RBP9.79□□□□□ -0.84
TTC39B-203ENST00000380853 SAMD7Q7Z3H4 446 aa9.79□□□□□ -0.84
TTC39B-203ENST00000380853 ATP7BP35670 1465 aa9.78□□□□□ -0.84
TTC39B-203ENST00000380853 BRWD3Q6RI45 1802 aa9.78□□□□□ -0.84
TTC39B-203ENST00000380853 PRR36Q9H6K5 1346 aa9.78□□□□□ -0.84
TTC39B-203ENST00000380853 C3orf80F5H4A9 247 aa9.78□□□□□ -0.84
TTC39B-203ENST00000380853 LAPTM4AQ15012 233 aa9.78□□□□□ -0.84
TTC39B-203ENST00000380853 TJAP1Q5JTD0 557 aa9.78□□□□□ -0.84
TTC39B-203ENST00000380853 VPS72Q15906 364 aa9.77□□□□□ -0.85
TTC39B-203ENST00000380853 FAM198AQ9UFP1 575 aa9.77□□□□□ -0.85
TTC39B-203ENST00000380853 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
TTC39B-203ENST00000380853 BLMP54132 1417 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms