RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 DOT1LQ8TEK3 1739 aa28.29■■■□□ 2.12
CDKN2A-202ENST00000380150 NSD2O96028 1365 aa28.28■■■□□ 2.12
CDKN2A-202ENST00000380150 SYT17Q9BSW7 474 aa28.28■■■□□ 2.12
CDKN2A-202ENST00000380150 DCAF8L1A6NGE4 600 aa28.27■■■□□ 2.12
CDKN2A-202ENST00000380150 SLC24A1O60721 1099 aa28.27■■■□□ 2.12
CDKN2A-202ENST00000380150 AKT1S1Q96B36 256 aa28.27■■■□□ 2.12
CDKN2A-202ENST00000380150 ZCRB1Q8TBF4 217 aaKnown RBP28.26■■■□□ 2.11
CDKN2A-202ENST00000380150 RTL1A6NKG5 1358 aa28.25■■■□□ 2.11
CDKN2A-202ENST00000380150 HSP90AB2PQ58FF8 381 aa28.22■■■□□ 2.11
CDKN2A-202ENST00000380150 ARXQ96QS3 562 aa28.22■■■□□ 2.11
CDKN2A-202ENST00000380150 SLC27A3Q5K4L6 730 aa28.21■■■□□ 2.11
CDKN2A-202ENST00000380150 CARD14Q9BXL6 1004 aa28.21■■■□□ 2.11
CDKN2A-202ENST00000380150 PNPLA7Q6ZV29 1317 aa28.2■■■□□ 2.11
CDKN2A-202ENST00000380150 KIF20BQ96Q89 1820 aa28.2■■■□□ 2.11
CDKN2A-202ENST00000380150 TUBGCP6Q96RT7 1819 aa28.2■■■□□ 2.1
CDKN2A-202ENST00000380150 LY75O60449 1722 aa28.19■■■□□ 2.1
CDKN2A-202ENST00000380150 INSRP06213 1382 aa28.16■■■□□ 2.1
CDKN2A-202ENST00000380150 QSER1Q2KHR3 1735 aa28.15■■■□□ 2.1
CDKN2A-202ENST00000380150 RAPGEF4Q8WZA2 1011 aa28.15■■■□□ 2.1
CDKN2A-202ENST00000380150 TFCP2L1Q9NZI6 479 aa28.15■■■□□ 2.1
CDKN2A-202ENST00000380150 EMILIN1Q9Y6C2 1016 aa28.15■■■□□ 2.1
CDKN2A-202ENST00000380150 SMG6Q86US8 1419 aaKnown RBP28.15■■■□□ 2.1
CDKN2A-202ENST00000380150 NSD3Q9BZ95 1437 aa28.14■■■□□ 2.1
CDKN2A-202ENST00000380150 FLT4P35916 1363 aa28.13■■■□□ 2.09
CDKN2A-202ENST00000380150 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
CDKN2A-202ENST00000380150 TATP17735 454 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-202ENST00000380150 CDCA8Q53HL2 280 aa28.11■■■□□ 2.09
CDKN2A-202ENST00000380150 MAP3K5Q99683 1374 aa28.11■■■□□ 2.09
CDKN2A-202ENST00000380150 COL24A1Q17RW2 1714 aa28.1■■■□□ 2.09
CDKN2A-202ENST00000380150 KLHL34Q8N239 644 aa28.1■■■□□ 2.09
CDKN2A-202ENST00000380150 SLC16A10Q8TF71 515 aa28.1■■■□□ 2.09
CDKN2A-202ENST00000380150 CGNL1Q0VF96 1302 aa28.1■■■□□ 2.09
CDKN2A-202ENST00000380150 GOLGB1Q14789 3259 aaKnown RBP28.08■■■□□ 2.09
CDKN2A-202ENST00000380150 CYP27B1O15528 508 aa28.08■■■□□ 2.09
CDKN2A-202ENST00000380150 ZNF784Q8NCA9 323 aaPredicted RBP28.07■■■□□ 2.08
CDKN2A-202ENST00000380150 PPM1GO15355 546 aaPredicted RBP28.06■■■□□ 2.08
CDKN2A-202ENST00000380150 COL23A1Q86Y22 540 aaPredicted RBP28.06■■■□□ 2.08
CDKN2A-202ENST00000380150 PCDH11XQ9BZA7 1347 aa28.06■■■□□ 2.08
CDKN2A-202ENST00000380150 PCDH11YQ9BZA8 1340 aa28.06■■■□□ 2.08
CDKN2A-202ENST00000380150 KIF24Q5T7B8 1368 aa28.06■■■□□ 2.08
CDKN2A-202ENST00000380150 TOGARAM1Q9Y4F4 1720 aa28.06■■■□□ 2.08
CDKN2A-202ENST00000380150 POLD1P28340 1107 aa28.04■■■□□ 2.08
CDKN2A-202ENST00000380150 MPRIPQ6WCQ1 1025 aa28.04■■■□□ 2.08
CDKN2A-202ENST00000380150 NLGN2Q8NFZ4 835 aa28.04■■■□□ 2.08
CDKN2A-202ENST00000380150 MSH5O43196 834 aa28.03■■■□□ 2.08
CDKN2A-202ENST00000380150 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
CDKN2A-202ENST00000380150 C5P01031 1676 aa28.01■■■□□ 2.07
CDKN2A-202ENST00000380150 MSL1Q68DK7 614 aa28.01■■■□□ 2.07
CDKN2A-202ENST00000380150 PKD1L3Q7Z443 1732 aa28.01■■■□□ 2.07
CDKN2A-202ENST00000380150 ANKRD26Q9UPS8 1709 aa28.01■■■□□ 2.07
CDKN2A-202ENST00000380150 NCAPD2Q15021 1401 aa28.01■■■□□ 2.07
CDKN2A-202ENST00000380150 PALLDQ8WX93 1383 aa28■■■□□ 2.07
CDKN2A-202ENST00000380150 GPR162Q16538 588 aa28■■■□□ 2.07
CDKN2A-202ENST00000380150 POLR3GLQ9BT43 218 aa28■■■□□ 2.07
CDKN2A-202ENST00000380150 ITGB4P16144 1822 aa27.98■■■□□ 2.07
CDKN2A-202ENST00000380150 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
CDKN2A-202ENST00000380150 WASHC2AQ641Q2 1341 aa27.97■■■□□ 2.07
CDKN2A-202ENST00000380150 CHD4Q14839 1912 aa27.97■■■□□ 2.07
CDKN2A-202ENST00000380150 AMIGO3Q86WK7 504 aa27.97■■■□□ 2.07
CDKN2A-202ENST00000380150 EYA1Q99502 592 aa27.97■■■□□ 2.07
CDKN2A-202ENST00000380150 TIMELESSQ9UNS1 1208 aa27.97■■■□□ 2.07
CDKN2A-202ENST00000380150 SMIM5Q71RC9 77 aa27.96■■■□□ 2.07
CDKN2A-202ENST00000380150 POLKQ9UBT6 870 aa27.96■■■□□ 2.07
CDKN2A-202ENST00000380150 TAF1LQ8IZX4 1826 aa27.96■■■□□ 2.07
CDKN2A-202ENST00000380150 MAP2P11137 1827 aaKnown RBP27.95■■■□□ 2.07
CDKN2A-202ENST00000380150 PIGBQ92521 554 aa27.95■■■□□ 2.06
CDKN2A-202ENST00000380150 TNNT2P45379 298 aaPredicted RBP27.94■■■□□ 2.06
CDKN2A-202ENST00000380150 NKX1-1Q15270 411 aaPredicted RBP27.92■■■□□ 2.06
CDKN2A-202ENST00000380150 C4BP0C0L5 1744 aa27.92■■■□□ 2.06
CDKN2A-202ENST00000380150 YBX3P16989 372 aaKnown RBP eCLIP27.9■■■□□ 2.06
CDKN2A-202ENST00000380150 SPG7Q9UQ90 795 aa27.9■■■□□ 2.06
CDKN2A-202ENST00000380150 EIF4A2Q14240 407 aaKnown RBP27.89■■■□□ 2.06
CDKN2A-202ENST00000380150 CLSPNQ9HAW4 1339 aa27.88■■■□□ 2.05
CDKN2A-202ENST00000380150 SMARCC1Q92922 1105 aaPredicted RBP27.87■■■□□ 2.05
CDKN2A-202ENST00000380150 PHF14O94880 888 aa27.86■■■□□ 2.05
CDKN2A-202ENST00000380150 HSPA5P11021 654 aaKnown RBP27.86■■■□□ 2.05
CDKN2A-202ENST00000380150 ASAP1Q9ULH1 1129 aa27.86■■■□□ 2.05
CDKN2A-202ENST00000380150 PHKG2P15735 406 aa27.85■■■□□ 2.05
CDKN2A-202ENST00000380150 LINC00116Q8NCU8 138 aa27.85■■■□□ 2.05
CDKN2A-202ENST00000380150 AK7Q96M32 723 aa27.85■■■□□ 2.05
CDKN2A-202ENST00000380150 UBR3Q6ZT12 1888 aa27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 LOC102724428A0A0B4J2F2 783 aa27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 SIK1P57059 783 aa27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 ITPK1Q13572 414 aa27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 PANK3Q9H999 370 aa27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 TMOD3Q9NYL9 352 aa27.83■■■□□ 2.05
CDKN2A-202ENST00000380150 IFNL2Q8IZJ0 200 aa27.82■■■□□ 2.04
CDKN2A-202ENST00000380150 FLAD1Q8NFF5 587 aa27.82■■■□□ 2.04
CDKN2A-202ENST00000380150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.81■■■□□ 2.04
CDKN2A-202ENST00000380150 EIF4G2P78344 907 aaKnown RBP eCLIP27.81■■■□□ 2.04
CDKN2A-202ENST00000380150 ATG3Q9NT62 314 aa27.79■■■□□ 2.04
CDKN2A-202ENST00000380150 IGSF1Q8N6C5 1336 aa27.78■■■□□ 2.04
CDKN2A-202ENST00000380150 CD2APQ9Y5K6 639 aa27.77■■■□□ 2.04
CDKN2A-202ENST00000380150 ATP6V1AP38606 617 aa27.76■■■□□ 2.03
CDKN2A-202ENST00000380150 C1QTNF8P60827 252 aa27.76■■■□□ 2.03
CDKN2A-202ENST00000380150 WWC3Q9ULE0 1092 aa27.75■■■□□ 2.03
CDKN2A-202ENST00000380150 GNPATO15228 680 aa27.74■■■□□ 2.03
CDKN2A-202ENST00000380150 SSFA2P28290 1259 aa27.74■■■□□ 2.03
CDKN2A-202ENST00000380150 SLC4A9Q96Q91 983 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms