RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ARHGEF25Q86VW2 580 aa10.15□□□□□ -0.78
CDKL5-202ENST00000379996 UBAP1LF5GYI3 381 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 JCADQ9P266 1359 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 KDM2BQ8NHM5 1336 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 EXOC6Q8TAG9 804 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 MAP3K19Q56UN5 1328 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 GCP02774 474 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 MTHFSP49914 203 aa10.14□□□□□ -0.79
CDKL5-202ENST00000379996 SEMA3EO15041 775 aa10.13□□□□□ -0.79
CDKL5-202ENST00000379996 IP6K1Q92551 441 aa10.13□□□□□ -0.79
CDKL5-202ENST00000379996 KDRP35968 1356 aa10.13□□□□□ -0.79
CDKL5-202ENST00000379996 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
CDKL5-202ENST00000379996 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
CDKL5-202ENST00000379996 SPATA31A6Q5VVP1 1343 aa10.12□□□□□ -0.79
CDKL5-202ENST00000379996 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
CDKL5-202ENST00000379996 DUSP27Q5VZP5 1158 aa10.12□□□□□ -0.79
CDKL5-202ENST00000379996 PKD1L3Q7Z443 1732 aa10.12□□□□□ -0.79
CDKL5-202ENST00000379996 IL13P35225 146 aa10.12□□□□□ -0.79
CDKL5-202ENST00000379996 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
CDKL5-202ENST00000379996 PARP4Q9UKK3 1724 aaKnown RBP10.11□□□□□ -0.79
CDKL5-202ENST00000379996 HOXC9P31274 260 aa10.11□□□□□ -0.79
CDKL5-202ENST00000379996 POTEDQ86YR6 584 aa10.11□□□□□ -0.79
CDKL5-202ENST00000379996 ADAMTS8Q9UP79 889 aa10.11□□□□□ -0.79
CDKL5-202ENST00000379996 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
CDKL5-202ENST00000379996 RGPD2P0DJD1 1756 aa10.11□□□□□ -0.79
CDKL5-202ENST00000379996 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
CDKL5-202ENST00000379996 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
CDKL5-202ENST00000379996 ADAMTS7Q9UKP4 1686 aa10.1□□□□□ -0.79
CDKL5-202ENST00000379996 CACNB1Q02641 598 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-202ENST00000379996 COL5A2P05997 1499 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-202ENST00000379996 SLIT2O94813 1529 aa10.1□□□□□ -0.79
CDKL5-202ENST00000379996 NGEFQ8N5V2 710 aa10.1□□□□□ -0.79
CDKL5-202ENST00000379996 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
CDKL5-202ENST00000379996 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
CDKL5-202ENST00000379996 CNGB1Q14028 1251 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-202ENST00000379996 ARID3AQ99856 593 aa10.1□□□□□ -0.79
CDKL5-202ENST00000379996 DIAPH1O60610 1272 aaKnown RBP10.09□□□□□ -0.79
CDKL5-202ENST00000379996 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
CDKL5-202ENST00000379996 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
CDKL5-202ENST00000379996 LRRC37A3O60309 1634 aa10.08□□□□□ -0.8
CDKL5-202ENST00000379996 PNNQ9H307 717 aaKnown RBP10.08□□□□□ -0.8
CDKL5-202ENST00000379996 KIAA0232Q92628 1395 aa10.08□□□□□ -0.8
CDKL5-202ENST00000379996 EIF4A2Q14240 407 aaKnown RBP10.08□□□□□ -0.8
CDKL5-202ENST00000379996 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
CDKL5-202ENST00000379996 LRP6O75581 1613 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 PPP1R37O75864 691 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 MS4A1P11836 297 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 FCHSD2O94868 740 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 PLEKHF1Q96S99 279 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 BACH2Q9BYV9 841 aa10.07□□□□□ -0.8
CDKL5-202ENST00000379996 TCERG1O14776 1098 aaKnown RBP10.06□□□□□ -0.8
CDKL5-202ENST00000379996 ERBB3P21860 1342 aa10.06□□□□□ -0.8
CDKL5-202ENST00000379996 MNX1P50219 401 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-202ENST00000379996 SLFN5Q08AF3 891 aa10.06□□□□□ -0.8
CDKL5-202ENST00000379996 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
CDKL5-202ENST00000379996 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
CDKL5-202ENST00000379996 DLG5Q8TDM6 1919 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 TNNT2P45379 298 aaPredicted RBP10.05□□□□□ -0.8
CDKL5-202ENST00000379996 AMPHP49418 695 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 NUTM2GQ5VZR2 741 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 WDR43Q15061 677 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDKL5-202ENST00000379996 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 CRBNQ96SW2 442 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 RSPH6AQ9H0K4 717 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
CDKL5-202ENST00000379996 FBXO41Q8TF61 875 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 OVOS2A0A0G2JMS6 1433 aa10.05□□□□□ -0.8
CDKL5-202ENST00000379996 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
CDKL5-202ENST00000379996 PLIN1O60240 522 aa10.04□□□□□ -0.8
CDKL5-202ENST00000379996 CRB1P82279 1406 aa10.04□□□□□ -0.8
CDKL5-202ENST00000379996 WDR17Q8IZU2 1322 aa10.04□□□□□ -0.8
CDKL5-202ENST00000379996 FBLN1P23142 703 aa10.04□□□□□ -0.8
CDKL5-202ENST00000379996 DISP2A7MBM2 1401 aa10.04□□□□□ -0.8
CDKL5-202ENST00000379996 THSD7AQ9UPZ6 1657 aa10.03□□□□□ -0.8
CDKL5-202ENST00000379996 RUNDC1Q96C34 613 aa10.03□□□□□ -0.8
CDKL5-202ENST00000379996 HSPA1LP34931 641 aa10.03□□□□□ -0.8
CDKL5-202ENST00000379996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDKL5-202ENST00000379996 AXIN2Q9Y2T1 843 aa10.03□□□□□ -0.8
CDKL5-202ENST00000379996 SIPA1L3O60292 1781 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-202ENST00000379996 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.81
CDKL5-202ENST00000379996 ANKRD24Q8TF21 1146 aa10.02□□□□□ -0.81
CDKL5-202ENST00000379996 FAM83GA6ND36 823 aa10.02□□□□□ -0.81
CDKL5-202ENST00000379996 PDE4AP27815 886 aa10.02□□□□□ -0.81
CDKL5-202ENST00000379996 FNBP4Q8N3X1 1017 aaPredicted RBP10.02□□□□□ -0.81
CDKL5-202ENST00000379996 EYA1Q99502 592 aa10.02□□□□□ -0.81
CDKL5-202ENST00000379996 BCL9LQ86UU0 1499 aa10.01□□□□□ -0.81
CDKL5-202ENST00000379996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDKL5-202ENST00000379996 CARD10Q9BWT7 1032 aa10.01□□□□□ -0.81
CDKL5-202ENST00000379996 PRDM11Q9NQV5 511 aa10.01□□□□□ -0.81
CDKL5-202ENST00000379996 SCN11AQ9UI33 1791 aa10.01□□□□□ -0.81
CDKL5-202ENST00000379996 MRC1P22897 1456 aa10□□□□□ -0.81
CDKL5-202ENST00000379996 THRAP3Q9Y2W1 955 aaKnown RBP10□□□□□ -0.81
CDKL5-202ENST00000379996 ZC3H6P61129 1189 aaKnown RBP10□□□□□ -0.81
CDKL5-202ENST00000379996 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
CDKL5-202ENST00000379996 ATRNO75882 1429 aa10□□□□□ -0.81
CDKL5-202ENST00000379996 HTATSF1O43719 755 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms