RNA–Protein interactions for RNA: ENST00000379384.9

TM6SF1-203, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 5

Gene TM6SF1, Length 1,808 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-203ENST00000379384 PKD1L3Q7Z443 1732 aa24.22■■□□□ 1.47
TM6SF1-203ENST00000379384 MARCH10Q8NA82 808 aaPredicted RBP24.21■■□□□ 1.47
TM6SF1-203ENST00000379384 SULT6B1Q6IMI4 303 aa24.21■■□□□ 1.47
TM6SF1-203ENST00000379384 AEBP1Q8IUX7 1158 aa24.21■■□□□ 1.47
TM6SF1-203ENST00000379384 MYBBP1AQ9BQG0 1328 aaKnown RBP24.19■■□□□ 1.46
TM6SF1-203ENST00000379384 ZCRB1Q8TBF4 217 aaKnown RBP24.19■■□□□ 1.46
TM6SF1-203ENST00000379384 UPF1Q92900 1129 aaKnown RBP eCLIP24.19■■□□□ 1.46
TM6SF1-203ENST00000379384 U2SURPO15042 1029 aaKnown RBP24.19■■□□□ 1.46
TM6SF1-203ENST00000379384 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
TM6SF1-203ENST00000379384 DDX54Q8TDD1 881 aaKnown RBP24.19■■□□□ 1.46
TM6SF1-203ENST00000379384 HMOX1P09601 288 aa24.17■■□□□ 1.46
TM6SF1-203ENST00000379384 KDRP35968 1356 aa24.17■■□□□ 1.46
TM6SF1-203ENST00000379384 NUDCQ9Y266 331 aa24.14■■□□□ 1.45
TM6SF1-203ENST00000379384 TNS1Q9HBL0 1735 aaKnown RBP24.14■■□□□ 1.45
TM6SF1-203ENST00000379384 PCDH11XQ9BZA7 1347 aa24.13■■□□□ 1.45
TM6SF1-203ENST00000379384 PCDH11YQ9BZA8 1340 aa24.13■■□□□ 1.45
TM6SF1-203ENST00000379384 SPG7Q9UQ90 795 aa24.12■■□□□ 1.45
TM6SF1-203ENST00000379384 TRIM37O94972 964 aa24.12■■□□□ 1.45
TM6SF1-203ENST00000379384 DOT1LQ8TEK3 1739 aa24.11■■□□□ 1.45
TM6SF1-203ENST00000379384 ANP32CO43423 234 aa24.11■■□□□ 1.45
TM6SF1-203ENST00000379384 BCL9O00512 1426 aa24.1■■□□□ 1.45
TM6SF1-203ENST00000379384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.1■■□□□ 1.45
TM6SF1-203ENST00000379384 PLEKHG2Q9H7P9 1386 aa24.1■■□□□ 1.45
TM6SF1-203ENST00000379384 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
TM6SF1-203ENST00000379384 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.452e-7■■■■□ 25.8
TM6SF1-203ENST00000379384 CYP27B1O15528 508 aa24.09■■□□□ 1.45
TM6SF1-203ENST00000379384 CCDC125Q86Z20 511 aa24.09■■□□□ 1.45
TM6SF1-203ENST00000379384 NHSQ6T4R5 1651 aa24.08■■□□□ 1.45
TM6SF1-203ENST00000379384 SF3B2Q13435 895 aaKnown RBP24.08■■□□□ 1.45
TM6SF1-203ENST00000379384 PLEKHO1Q53GL0 409 aaPredicted RBP24.07■■□□□ 1.44
TM6SF1-203ENST00000379384 ACSBG1Q96GR2 724 aa24.07■■□□□ 1.44
TM6SF1-203ENST00000379384 VIRMAQ69YN4 1812 aaKnown RBP24.07■■□□□ 1.44
TM6SF1-203ENST00000379384 AMOTQ4VCS5 1084 aa24.06■■□□□ 1.44
TM6SF1-203ENST00000379384 TOGARAM1Q9Y4F4 1720 aa24.05■■□□□ 1.44
TM6SF1-203ENST00000379384 ITGB4P16144 1822 aa24.05■■□□□ 1.44
TM6SF1-203ENST00000379384 PTF1AQ7RTS3 328 aa24.05■■□□□ 1.44
TM6SF1-203ENST00000379384 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
TM6SF1-203ENST00000379384 BTAF1O14981 1849 aa24.04■■□□□ 1.44
TM6SF1-203ENST00000379384 KCNQ2O43526 872 aa24.04■■□□□ 1.44
TM6SF1-203ENST00000379384 RSPH6AQ9H0K4 717 aa24.04■■□□□ 1.44
TM6SF1-203ENST00000379384 PHKG2P15735 406 aa24.03■■□□□ 1.44
TM6SF1-203ENST00000379384 ZNF530Q6P9A1 599 aaPredicted RBP24.03■■□□□ 1.44
TM6SF1-203ENST00000379384 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
TM6SF1-203ENST00000379384 MIER1Q8N108 512 aa24.03■■□□□ 1.44
TM6SF1-203ENST00000379384 DEFB132Q7Z7B7 95 aa24.02■■□□□ 1.44
TM6SF1-203ENST00000379384 SYTL4Q96C24 671 aaPredicted RBP24.02■■□□□ 1.44
TM6SF1-203ENST00000379384 BCL11BQ9C0K0 894 aaPredicted RBP24.02■■□□□ 1.44
TM6SF1-203ENST00000379384 FCHSD2O94868 740 aa24■■□□□ 1.43
TM6SF1-203ENST00000379384 APBA3O96018 575 aa24■■□□□ 1.43
TM6SF1-203ENST00000379384 C1orf141Q5JVX7 400 aa24■■□□□ 1.43
TM6SF1-203ENST00000379384 BAG6P46379 1132 aa23.99■■□□□ 1.43
TM6SF1-203ENST00000379384 PRIM1P49642 420 aaKnown RBP23.99■■□□□ 1.43
TM6SF1-203ENST00000379384 NKX1-1Q15270 411 aaPredicted RBP23.99■■□□□ 1.43
TM6SF1-203ENST00000379384 MTHFSDQ2M296 383 aaKnown RBP23.99■■□□□ 1.43
TM6SF1-203ENST00000379384 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
TM6SF1-203ENST00000379384 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
TM6SF1-203ENST00000379384 EN1Q05925 392 aaPredicted RBP23.97■■□□□ 1.43
TM6SF1-203ENST00000379384 CCDC184Q52MB2 194 aa23.97■■□□□ 1.43
TM6SF1-203ENST00000379384 RGPD3A6NKT7 1758 aaPredicted RBP23.96■■□□□ 1.43
TM6SF1-203ENST00000379384 RGPD4Q7Z3J3 1758 aa23.96■■□□□ 1.43
TM6SF1-203ENST00000379384 HSP90AB1P08238 724 aaKnown RBP23.96■■□□□ 1.43
TM6SF1-203ENST00000379384 WDR43Q15061 677 aaKnown RBP eCLIP23.96■■□□□ 1.43
TM6SF1-203ENST00000379384 DLG5Q8TDM6 1919 aa23.96■■□□□ 1.43
TM6SF1-203ENST00000379384 AKAP4Q5JQC9 854 aa23.95■■□□□ 1.42
TM6SF1-203ENST00000379384 MPRIPQ6WCQ1 1025 aa23.94■■□□□ 1.42
TM6SF1-203ENST00000379384 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
TM6SF1-203ENST00000379384 KDM6AO15550 1401 aaPredicted RBP23.94■■□□□ 1.42
TM6SF1-203ENST00000379384 GAS2L2Q8NHY3 880 aa23.94■■□□□ 1.42
TM6SF1-203ENST00000379384 NEFMP07197 916 aa23.92■■□□□ 1.42
TM6SF1-203ENST00000379384 EZH2Q15910 746 aaKnown RBP23.91■■□□□ 1.42
TM6SF1-203ENST00000379384 PLEKHF1Q96S99 279 aa23.91■■□□□ 1.42
TM6SF1-203ENST00000379384 PNNQ9H307 717 aaKnown RBP23.91■■□□□ 1.42
TM6SF1-203ENST00000379384 MRS2Q9HD23 443 aa23.91■■□□□ 1.42
TM6SF1-203ENST00000379384 RREB1Q92766 1687 aa23.91■■□□□ 1.42
TM6SF1-203ENST00000379384 ADAMTS8Q9UP79 889 aa23.91■■□□□ 1.42
TM6SF1-203ENST00000379384 PLSCR1O15162 318 aa23.9■■□□□ 1.42
TM6SF1-203ENST00000379384 CAMKK2Q96RR4 588 aa23.9■■□□□ 1.42
TM6SF1-203ENST00000379384 ADAMTS7Q9UKP4 1686 aa23.89■■□□□ 1.42
TM6SF1-203ENST00000379384 MAPK8IP3Q9UPT6 1336 aa23.89■■□□□ 1.42
TM6SF1-203ENST00000379384 MAP3K5Q99683 1374 aa23.89■■□□□ 1.42
TM6SF1-203ENST00000379384 LY75O60449 1722 aa23.89■■□□□ 1.41
TM6SF1-203ENST00000379384 TMOD3Q9NYL9 352 aa23.89■■□□□ 1.41
TM6SF1-203ENST00000379384 GNAT3A8MTJ3 354 aa23.88■■□□□ 1.41
TM6SF1-203ENST00000379384 ERVV-2B6SEH9 535 aa23.88■■□□□ 1.41
TM6SF1-203ENST00000379384 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
TM6SF1-203ENST00000379384 CCDC146Q8IYE0 955 aa23.87■■□□□ 1.41
TM6SF1-203ENST00000379384 PIGBQ92521 554 aa23.87■■□□□ 1.41
TM6SF1-203ENST00000379384 LGR6Q9HBX8 967 aa23.87■■□□□ 1.41
TM6SF1-203ENST00000379384 CABP4P57796 275 aa23.86■■□□□ 1.41
TM6SF1-203ENST00000379384 RNMTO43148 476 aaKnown RBP23.85■■□□□ 1.41
TM6SF1-203ENST00000379384 NFATC2IPQ8NCF5 419 aa23.84■■□□□ 1.41
TM6SF1-203ENST00000379384 SIPA1L3O60292 1781 aaPredicted RBP23.83■■□□□ 1.41
TM6SF1-203ENST00000379384 PROM2Q8N271 834 aa23.83■■□□□ 1.41
TM6SF1-203ENST00000379384 PNISRQ8TF01 805 aaKnown RBP23.83■■□□□ 1.41
TM6SF1-203ENST00000379384 MRC1P22897 1456 aa23.82■■□□□ 1.4
TM6SF1-203ENST00000379384 TXNRD1Q16881 649 aa23.82■■□□□ 1.4
TM6SF1-203ENST00000379384 NFE2L2Q16236 605 aa23.82■■□□□ 1.4
TM6SF1-203ENST00000379384 IL17REQ8NFR9 667 aa23.82■■□□□ 1.4
TM6SF1-203ENST00000379384 RUNDC1Q96C34 613 aa23.82■■□□□ 1.4
TM6SF1-203ENST00000379384 RTF1Q92541 710 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms