RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ST20-MTHFSA0A0A6YYL1 179 aa13.11□□□□□ -0.31
PTCHD1-201ENST00000379361 ZPR1O75312 459 aa13.11□□□□□ -0.31
PTCHD1-201ENST00000379361 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 CA8P35219 290 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 NLRP6P59044 892 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 CCDC175P0C221 793 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 LUZP1Q86V48 1076 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
PTCHD1-201ENST00000379361 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 CTNNA2P26232 953 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 DDX12PQ92771 950 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 STXBP4Q6ZWJ1 553 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 BCCIPQ9P287 314 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 HMOX1P09601 288 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 GNAI2P04899 355 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 FIBPO43427 364 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 V9GYY5 206 aaPredicted RBP13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
PTCHD1-201ENST00000379361 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.31
PTCHD1-201ENST00000379361 IFFO1Q0D2I5 559 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 IKBKGQ9Y6K9 419 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 PDE4AP27815 886 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 ODF2LQ9ULJ1 636 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 TMEM266Q2M3C6 531 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 CUX1P39880 1505 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
PTCHD1-201ENST00000379361 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 NUTM2GQ5VZR2 741 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 TOM1L2Q6ZVM7 507 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 MACROD2A1Z1Q3 448 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 MRE11P49959 708 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 UBE4AQ14139 1066 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 ICE1Q9Y2F5 2266 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 MTHFSP49914 203 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
PTCHD1-201ENST00000379361 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 FKBP15Q5T1M5 1219 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 SYNCQ9H7C4 482 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 CAVIN4Q5BKX8 364 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 SMTNL1A8MU46 457 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 GOPCQ9HD26 462 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 DZIP1Q86YF9 867 aaKnown RBP13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 A0A087WZG4 1122 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
PTCHD1-201ENST00000379361 UTP14AQ9BVJ6 771 aaKnown RBP13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 ALS2CR12Q96Q35 445 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 C6orf163Q5TEZ5 329 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 KRT32Q14532 448 aa13.05□□□□□ -0.32
PTCHD1-201ENST00000379361 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 STARD3NLO95772 234 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 RNF214Q8ND24 703 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 RAPGEF2Q9Y4G8 1499 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 AIDAQ96BJ3 306 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 NOC2LQ9Y3T9 749 aaKnown RBP13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC82Q8N4S0 544 aa13.04□□□□□ -0.32
PTCHD1-201ENST00000379361 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 FAM107BQ9H098 131 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms