RNA–Protein interactions for RNA: ENST00000379268.6

TNFRSF18-203, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 1,179 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-203ENST00000379268 RAPGEF4Q8WZA2 1011 aa29.12■■■□□ 2.25
TNFRSF18-203ENST00000379268 POLR3GLQ9BT43 218 aa29.12■■■□□ 2.25
TNFRSF18-203ENST00000379268 HSPA5P11021 654 aaKnown RBP29.11■■■□□ 2.25
TNFRSF18-203ENST00000379268 SHANK3Q9BYB0 1731 aa29.11■■■□□ 2.25
TNFRSF18-203ENST00000379268 USHBP1Q8N6Y0 703 aa29.09■■■□□ 2.25
TNFRSF18-203ENST00000379268 PPP1R1BQ9UD71 204 aaPredicted RBP29.09■■■□□ 2.25
TNFRSF18-203ENST00000379268 MAP2P11137 1827 aaKnown RBP29.08■■■□□ 2.25
TNFRSF18-203ENST00000379268 EMILIN1Q9Y6C2 1016 aa29.08■■■□□ 2.25
TNFRSF18-203ENST00000379268 TATP17735 454 aaPredicted RBP29.07■■■□□ 2.24
TNFRSF18-203ENST00000379268 PRIM1P49642 420 aaKnown RBP29.07■■■□□ 2.24
TNFRSF18-203ENST00000379268 SYTL4Q96C24 671 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF18-203ENST00000379268 PDGFDQ9GZP0 370 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF18-203ENST00000379268 ANKRD26Q9UPS8 1709 aa29.06■■■□□ 2.24
TNFRSF18-203ENST00000379268 DOT1LQ8TEK3 1739 aa29.05■■■□□ 2.24
TNFRSF18-203ENST00000379268 PPM1GO15355 546 aaPredicted RBP29.04■■■□□ 2.24
TNFRSF18-203ENST00000379268 SLC27A3Q5K4L6 730 aa29.04■■■□□ 2.24
TNFRSF18-203ENST00000379268 PAPPAQ13219 1627 aa29.04■■■□□ 2.24
TNFRSF18-203ENST00000379268 WASHC2AQ641Q2 1341 aa29.03■■■□□ 2.24
TNFRSF18-203ENST00000379268 ZBTB7AO95365 584 aa29.02■■■□□ 2.24
TNFRSF18-203ENST00000379268 LRRC4BQ9NT99 713 aa29.02■■■□□ 2.24
TNFRSF18-203ENST00000379268 PCDH11XQ9BZA7 1347 aa29■■■□□ 2.23
TNFRSF18-203ENST00000379268 PCDH11YQ9BZA8 1340 aa29■■■□□ 2.23
TNFRSF18-203ENST00000379268 PANK3Q9H999 370 aa29■■■□□ 2.23
TNFRSF18-203ENST00000379268 POLKQ9UBT6 870 aa28.99■■■□□ 2.23
TNFRSF18-203ENST00000379268 NSD2O96028 1365 aa28.99■■■□□ 2.23
TNFRSF18-203ENST00000379268 MTFR1LQ9H019 292 aa28.98■■■□□ 2.23
TNFRSF18-203ENST00000379268 ATF5Q9Y2D1 282 aaPredicted RBP28.98■■■□□ 2.23
TNFRSF18-203ENST00000379268 NCAPD2Q15021 1401 aa28.97■■■□□ 2.23
TNFRSF18-203ENST00000379268 LY75O60449 1722 aa28.97■■■□□ 2.23
TNFRSF18-203ENST00000379268 PTGER2P43116 358 aa28.96■■■□□ 2.23
TNFRSF18-203ENST00000379268 ZNF827Q17R98 1081 aa28.96■■■□□ 2.23
TNFRSF18-203ENST00000379268 AKT1S1Q96B36 256 aa28.94■■■□□ 2.22
TNFRSF18-203ENST00000379268 EYA1Q99502 592 aa28.93■■■□□ 2.22
TNFRSF18-203ENST00000379268 PKD1L3Q7Z443 1732 aa28.93■■■□□ 2.22
TNFRSF18-203ENST00000379268 CYP27B1O15528 508 aa28.92■■■□□ 2.22
TNFRSF18-203ENST00000379268 TNNT2P45379 298 aaPredicted RBP28.92■■■□□ 2.22
TNFRSF18-203ENST00000379268 QSER1Q2KHR3 1735 aa28.91■■■□□ 2.22
TNFRSF18-203ENST00000379268 DCAF8L1A6NGE4 600 aa28.91■■■□□ 2.22
TNFRSF18-203ENST00000379268 SPG7Q9UQ90 795 aa28.91■■■□□ 2.22
TNFRSF18-203ENST00000379268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.9■■■□□ 2.22
TNFRSF18-203ENST00000379268 HMGB2P26583 209 aaKnown RBP28.89■■■□□ 2.22
TNFRSF18-203ENST00000379268 SLC16A10Q8TF71 515 aa28.89■■■□□ 2.22
TNFRSF18-203ENST00000379268 SGIP1Q9BQI5 828 aa28.89■■■□□ 2.22
TNFRSF18-203ENST00000379268 CCNL1Q9UK58 526 aaPredicted RBP28.89■■■□□ 2.22
TNFRSF18-203ENST00000379268 KCNQ4P56696 695 aa28.88■■■□□ 2.21
TNFRSF18-203ENST00000379268 EIF4A2Q14240 407 aaKnown RBP28.87■■■□□ 2.21
TNFRSF18-203ENST00000379268 NKX1-1Q15270 411 aaPredicted RBP28.87■■■□□ 2.21
TNFRSF18-203ENST00000379268 TFCP2L1Q9NZI6 479 aa28.87■■■□□ 2.21
TNFRSF18-203ENST00000379268 MPRIPQ6WCQ1 1025 aa28.86■■■□□ 2.21
TNFRSF18-203ENST00000379268 ITGB4P16144 1822 aa28.85■■■□□ 2.21
TNFRSF18-203ENST00000379268 KNSTRNQ9Y448 316 aa28.85■■■□□ 2.21
TNFRSF18-203ENST00000379268 PLEKHG2Q9H7P9 1386 aa28.84■■■□□ 2.21
TNFRSF18-203ENST00000379268 MORC1Q86VD1 984 aa28.83■■■□□ 2.21
TNFRSF18-203ENST00000379268 PNPLA7Q6ZV29 1317 aa28.83■■■□□ 2.21
TNFRSF18-203ENST00000379268 ARXQ96QS3 562 aa28.82■■■□□ 2.2
TNFRSF18-203ENST00000379268 TOGARAM1Q9Y4F4 1720 aa28.82■■■□□ 2.2
TNFRSF18-203ENST00000379268 TUBGCP6Q96RT7 1819 aa28.82■■■□□ 2.2
TNFRSF18-203ENST00000379268 SMARCC1Q92922 1105 aaPredicted RBP28.81■■■□□ 2.2
TNFRSF18-203ENST00000379268 SYT17Q9BSW7 474 aa28.81■■■□□ 2.2
TNFRSF18-203ENST00000379268 FHDC1Q9C0D6 1143 aaPredicted RBP28.81■■■□□ 2.2
TNFRSF18-203ENST00000379268 PALLDQ8WX93 1383 aa28.8■■■□□ 2.2
TNFRSF18-203ENST00000379268 IFNL2Q8IZJ0 200 aa28.8■■■□□ 2.2
TNFRSF18-203ENST00000379268 IGSF1Q8N6C5 1336 aa28.79■■■□□ 2.2
TNFRSF18-203ENST00000379268 KIF7Q2M1P5 1343 aa28.78■■■□□ 2.2
TNFRSF18-203ENST00000379268 C5P01031 1676 aa28.77■■■□□ 2.2
TNFRSF18-203ENST00000379268 PHKG2P15735 406 aa28.77■■■□□ 2.2
TNFRSF18-203ENST00000379268 COL24A1Q17RW2 1714 aa28.77■■■□□ 2.2
TNFRSF18-203ENST00000379268 TAF1LQ8IZX4 1826 aa28.76■■■□□ 2.19
TNFRSF18-203ENST00000379268 POLD1P28340 1107 aa28.76■■■□□ 2.19
TNFRSF18-203ENST00000379268 PIGBQ92521 554 aa28.76■■■□□ 2.19
TNFRSF18-203ENST00000379268 MAP3K5Q99683 1374 aa28.75■■■□□ 2.19
TNFRSF18-203ENST00000379268 AMER1Q5JTC6 1135 aaPredicted RBP28.73■■■□□ 2.19
TNFRSF18-203ENST00000379268 TMOD3Q9NYL9 352 aa28.73■■■□□ 2.19
TNFRSF18-203ENST00000379268 YY1P25490 414 aa28.71■■■□□ 2.19
TNFRSF18-203ENST00000379268 COL23A1Q86Y22 540 aaPredicted RBP28.71■■■□□ 2.19
TNFRSF18-203ENST00000379268 FLAD1Q8NFF5 587 aa28.71■■■□□ 2.19
TNFRSF18-203ENST00000379268 PLEKHO1Q53GL0 409 aaPredicted RBP28.7■■■□□ 2.18
TNFRSF18-203ENST00000379268 MSH5O43196 834 aa28.69■■■□□ 2.18
TNFRSF18-203ENST00000379268 AMOTQ4VCS5 1084 aa28.69■■■□□ 2.18
TNFRSF18-203ENST00000379268 HSP90AB1P08238 724 aaKnown RBP28.68■■■□□ 2.18
TNFRSF18-203ENST00000379268 C4BP0C0L5 1744 aa28.66■■■□□ 2.18
TNFRSF18-203ENST00000379268 LOC102724428A0A0B4J2F2 783 aa28.66■■■□□ 2.18
TNFRSF18-203ENST00000379268 ERVV-2B6SEH9 535 aa28.66■■■□□ 2.18
TNFRSF18-203ENST00000379268 PER1O15534 1290 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF18-203ENST00000379268 SIK1P57059 783 aa28.66■■■□□ 2.18
TNFRSF18-203ENST00000379268 DCAF5Q96JK2 942 aa28.66■■■□□ 2.18
TNFRSF18-203ENST00000379268 ASAP1Q9ULH1 1129 aa28.65■■■□□ 2.18
TNFRSF18-203ENST00000379268 IL13P35225 146 aa28.64■■■□□ 2.18
TNFRSF18-203ENST00000379268 AK7Q96M32 723 aa28.64■■■□□ 2.18
TNFRSF18-203ENST00000379268 ZNF530Q6P9A1 599 aaPredicted RBP28.63■■■□□ 2.17
TNFRSF18-203ENST00000379268 AEBP1Q8IUX7 1158 aa28.63■■■□□ 2.17
TNFRSF18-203ENST00000379268 KDRP35968 1356 aa28.62■■■□□ 2.17
TNFRSF18-203ENST00000379268 SULT6B1Q6IMI4 303 aa28.62■■■□□ 2.17
TNFRSF18-203ENST00000379268 ATG3Q9NT62 314 aa28.62■■■□□ 2.17
TNFRSF18-203ENST00000379268 MTHFSP49914 203 aa28.61■■■□□ 2.17
TNFRSF18-203ENST00000379268 KLHL34Q8N239 644 aa28.61■■■□□ 2.17
TNFRSF18-203ENST00000379268 UBR3Q6ZT12 1888 aa28.61■■■□□ 2.17
TNFRSF18-203ENST00000379268 ATP6V1AP38606 617 aa28.59■■■□□ 2.17
TNFRSF18-203ENST00000379268 C1orf141Q5JVX7 400 aa28.59■■■□□ 2.17
TNFRSF18-203ENST00000379268 LINC00116Q8NCU8 138 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms