RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
LINC00654-201ENST00000379053 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 STIM1Q13586 685 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 TANGO6Q9C0B7 1094 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 SMC2O95347 1197 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 FCHSD2O94868 740 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 DZIP1Q86YF9 867 aaKnown RBP12.94□□□□□ -0.34
LINC00654-201ENST00000379053 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
LINC00654-201ENST00000379053 CDKL5O76039 1030 aa12.93□□□□□ -0.34
LINC00654-201ENST00000379053 MYO6Q9UM54 1294 aa12.93□□□□□ -0.34
LINC00654-201ENST00000379053 BCAR3O75815 825 aa12.93□□□□□ -0.34
LINC00654-201ENST00000379053 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
LINC00654-201ENST00000379053 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
LINC00654-201ENST00000379053 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
LINC00654-201ENST00000379053 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
LINC00654-201ENST00000379053 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 FIBPO43427 364 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 KIF21BO75037 1637 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 GRM1Q13255 1194 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 MKNK2Q9HBH9 465 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 RABEP1Q15276 862 aa12.92□□□□□ -0.34
LINC00654-201ENST00000379053 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
LINC00654-201ENST00000379053 TNIP1Q15025 636 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
LINC00654-201ENST00000379053 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 ZNHIT6Q9NWK9 470 aaKnown RBP12.91□□□□□ -0.34
LINC00654-201ENST00000379053 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 MYD88Q99836 296 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 NF2P35240 595 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 FAM13BQ9NYF5 915 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 ME1P48163 572 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 MCM10Q7L590 875 aa12.91□□□□□ -0.34
LINC00654-201ENST00000379053 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 NEBLO76041 1014 aa12.9□□□□□ -0.34
LINC00654-201ENST00000379053 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 PDE3AQ14432 1141 aa12.9□□□□□ -0.34
LINC00654-201ENST00000379053 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
LINC00654-201ENST00000379053 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 ZNF622Q969S3 477 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 EPRSP07814 1512 aaKnown RBP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
LINC00654-201ENST00000379053 RNF214Q8ND24 703 aa12.9□□□□□ -0.34
LINC00654-201ENST00000379053 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.35
LINC00654-201ENST00000379053 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.35
LINC00654-201ENST00000379053 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.35
LINC00654-201ENST00000379053 ARGLU1Q9NWB6 273 aaPredicted RBP12.9□□□□□ -0.35
LINC00654-201ENST00000379053 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
LINC00654-201ENST00000379053 DESP17661 470 aa12.89□□□□□ -0.35
LINC00654-201ENST00000379053 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
LINC00654-201ENST00000379053 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
LINC00654-201ENST00000379053 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
LINC00654-201ENST00000379053 DEF6Q9H4E7 631 aa12.89□□□□□ -0.35
LINC00654-201ENST00000379053 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
LINC00654-201ENST00000379053 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
LINC00654-201ENST00000379053 RFC4P35249 363 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
LINC00654-201ENST00000379053 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
LINC00654-201ENST00000379053 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 SLC5A1P13866 664 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 GPTP24298 496 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 NME9Q86XW9 330 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 WASF1Q92558 559 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
LINC00654-201ENST00000379053 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 KRT32Q14532 448 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 SERPINC1P01008 464 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 LMOD1P29536 600 aaPredicted RBP12.87□□□□□ -0.35
LINC00654-201ENST00000379053 FEZ1Q99689 392 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 MBD3O95983 291 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
LINC00654-201ENST00000379053 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
LINC00654-201ENST00000379053 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
LINC00654-201ENST00000379053 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
LINC00654-201ENST00000379053 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
LINC00654-201ENST00000379053 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 GPR162Q16538 588 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
LINC00654-201ENST00000379053 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms