RNA–Protein interactions for RNA: ENST00000378954.8

ATL2-201, Transcript of atlastin GTPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATL2, Length 2,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-201ENST00000378954 USP54Q70EL1 1684 aa17.05■□□□□ 0.32
ATL2-201ENST00000378954 GCP02774 474 aa17.05■□□□□ 0.32
ATL2-201ENST00000378954 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
ATL2-201ENST00000378954 KRT28Q7Z3Y7 464 aa17.05■□□□□ 0.32
ATL2-201ENST00000378954 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
ATL2-201ENST00000378954 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
ATL2-201ENST00000378954 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
ATL2-201ENST00000378954 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
ATL2-201ENST00000378954 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
ATL2-201ENST00000378954 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
ATL2-201ENST00000378954 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
ATL2-201ENST00000378954 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
ATL2-201ENST00000378954 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
ATL2-201ENST00000378954 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
ATL2-201ENST00000378954 LTN1O94822 1766 aa17.02■□□□□ 0.32
ATL2-201ENST00000378954 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.31
ATL2-201ENST00000378954 ATF3P18847 181 aa17.02■□□□□ 0.31
ATL2-201ENST00000378954 ZBTB7BO15156 539 aaPredicted RBP17.01■□□□□ 0.31
ATL2-201ENST00000378954 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
ATL2-201ENST00000378954 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
ATL2-201ENST00000378954 ABCC4O15439 1325 aa17.01■□□□□ 0.31
ATL2-201ENST00000378954 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
ATL2-201ENST00000378954 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
ATL2-201ENST00000378954 MSH6P52701 1360 aa17■□□□□ 0.31
ATL2-201ENST00000378954 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
ATL2-201ENST00000378954 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
ATL2-201ENST00000378954 STRCP1A6NGW2 1772 aa16.99■□□□□ 0.31
ATL2-201ENST00000378954 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
ATL2-201ENST00000378954 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
ATL2-201ENST00000378954 ZC3H6P61129 1189 aaKnown RBP16.98■□□□□ 0.31
ATL2-201ENST00000378954 API5Q9BZZ5 524 aaKnown RBP16.98■□□□□ 0.31
ATL2-201ENST00000378954 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
ATL2-201ENST00000378954 MST1RQ04912 1400 aa16.97■□□□□ 0.31
ATL2-201ENST00000378954 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
ATL2-201ENST00000378954 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
ATL2-201ENST00000378954 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
ATL2-201ENST00000378954 USP19O94966 1318 aa16.95■□□□□ 0.3
ATL2-201ENST00000378954 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
ATL2-201ENST00000378954 G2E3Q7L622 706 aa16.95■□□□□ 0.3
ATL2-201ENST00000378954 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
ATL2-201ENST00000378954 SMC5Q8IY18 1101 aa16.95■□□□□ 0.3
ATL2-201ENST00000378954 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
ATL2-201ENST00000378954 SEC24BO95487 1268 aa16.94■□□□□ 0.3
ATL2-201ENST00000378954 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
ATL2-201ENST00000378954 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
ATL2-201ENST00000378954 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
ATL2-201ENST00000378954 TRPM3Q9HCF6 1732 aaPredicted RBP16.94■□□□□ 0.3
ATL2-201ENST00000378954 RGS12O14924 1447 aa16.94■□□□□ 0.3
ATL2-201ENST00000378954 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
ATL2-201ENST00000378954 SLIT3O75094 1523 aa16.94■□□□□ 0.3
ATL2-201ENST00000378954 SIRT2Q8IXJ6 389 aa16.93■□□□□ 0.3
ATL2-201ENST00000378954 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
ATL2-201ENST00000378954 F6X3S4 739 aa16.92■□□□□ 0.3
ATL2-201ENST00000378954 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
ATL2-201ENST00000378954 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
ATL2-201ENST00000378954 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
ATL2-201ENST00000378954 INTS3Q68E01 1043 aaKnown RBP16.91■□□□□ 0.3
ATL2-201ENST00000378954 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
ATL2-201ENST00000378954 MPRIPQ6WCQ1 1025 aa16.9■□□□□ 0.3
ATL2-201ENST00000378954 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
ATL2-201ENST00000378954 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
ATL2-201ENST00000378954 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
ATL2-201ENST00000378954 PTPRCP08575 1304 aa16.89■□□□□ 0.29
ATL2-201ENST00000378954 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.29
ATL2-201ENST00000378954 DCCP43146 1447 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 NUCB1Q02818 461 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
ATL2-201ENST00000378954 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 KCNQ3O43525 872 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 MEIS3Q99687 375 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 ERBB3P21860 1342 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
ATL2-201ENST00000378954 PXDNQ92626 1479 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 LMTK3Q96Q04 1460 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
ATL2-201ENST00000378954 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
ATL2-201ENST00000378954 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 SLC4A3P48751 1232 aa16.87■□□□□ 0.29
ATL2-201ENST00000378954 ALS2Q96Q42 1657 aa16.86■□□□□ 0.29
ATL2-201ENST00000378954 AKAP4Q5JQC9 854 aa16.86■□□□□ 0.29
ATL2-201ENST00000378954 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
ATL2-201ENST00000378954 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
ATL2-201ENST00000378954 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
ATL2-201ENST00000378954 FLIIQ13045 1269 aa16.85■□□□□ 0.29
ATL2-201ENST00000378954 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
ATL2-201ENST00000378954 BRINP3Q76B58 766 aa16.85■□□□□ 0.29
ATL2-201ENST00000378954 EIF2S2P20042 333 aaKnown RBP16.84■□□□□ 0.29
ATL2-201ENST00000378954 TEFQ10587 303 aa16.84■□□□□ 0.29
ATL2-201ENST00000378954 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
ATL2-201ENST00000378954 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
ATL2-201ENST00000378954 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
ATL2-201ENST00000378954 AMOTQ4VCS5 1084 aa16.84■□□□□ 0.29
ATL2-201ENST00000378954 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.29
ATL2-201ENST00000378954 GCC1Q96CN9 775 aa16.83■□□□□ 0.29
ATL2-201ENST00000378954 NCAPD2Q15021 1401 aa16.83■□□□□ 0.29
ATL2-201ENST00000378954 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.28
ATL2-201ENST00000378954 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms