RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 ADAMTS19Q8TE59 1207 aa8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 TRIM44Q96DX7 344 aaPredicted RBP8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 UPF2Q9HAU5 1272 aaKnown RBP8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 CCDC94Q9BW85 323 aaPredicted RBP8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 C22orf23Q9BZE7 217 aa8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
CDKAL1-202ENST00000378610 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 ABL2P42684 1182 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 DPH6Q7L8W6 267 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 PRG4Q92954 1404 aaPredicted RBP8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 MTMR14Q8NCE2 650 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 KIF2CQ99661 725 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 RNF39Q9H2S5 420 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 PDZRN3Q9UPQ7 1066 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 NUP155O75694 1391 aa8.28□□□□□ -1.08
CDKAL1-202ENST00000378610 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.08
CDKAL1-202ENST00000378610 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
CDKAL1-202ENST00000378610 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
CDKAL1-202ENST00000378610 GNPATO15228 680 aa8.27□□□□□ -1.09
CDKAL1-202ENST00000378610 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
CDKAL1-202ENST00000378610 GPATCH3Q96I76 525 aa8.27□□□□□ -1.09
CDKAL1-202ENST00000378610 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.09
CDKAL1-202ENST00000378610 KIF20AO95235 890 aa8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 NASPP49321 788 aaPredicted RBP8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 HDAC1Q13547 482 aaPredicted RBP8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 GTPBP4Q9BZE4 634 aaKnown RBP8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 DPYSL4O14531 572 aa8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 NBPF1Q3BBV0 1214 aa8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 SCAF11Q99590 1463 aaKnown RBP8.26□□□□□ -1.09
CDKAL1-202ENST00000378610 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 GORABQ5T7V8 394 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 RBM46Q8TBY0 533 aaKnown RBP8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 GBP4Q96PP9 640 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 ZKSCAN5Q9Y2L8 839 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 PLB1Q6P1J6 1458 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 DSG3P32926 999 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 RARSP54136 660 aaKnown RBP8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 SF3A1Q15459 793 aaKnown RBP8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 TUBGCP6Q96RT7 1819 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 UQCRHLA0A096LP55 91 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 UQCRHP07919 91 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 TMF1P82094 1093 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 SASS6Q6UVJ0 657 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 KLHL42Q9P2K6 505 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 CLEC11AQ9Y240 323 aa8.25□□□□□ -1.09
CDKAL1-202ENST00000378610 MED14O60244 1454 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 RFC5P40937 340 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 TRPM2O94759 1503 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 DEPDC5O75140 1603 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 AK9Q5TCS8 1911 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 ATP10BO94823 1461 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 SOCS7O14512 581 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 RLBP1P12271 317 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 WDR43Q15061 677 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 HDGFL1Q5TGJ6 251 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 PANK1Q8TE04 598 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 TBC1D2BQ9UPU7 963 aa8.24□□□□□ -1.09
CDKAL1-202ENST00000378610 ARAP3Q8WWN8 1544 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 ANAPC15P60006 121 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 PCDHB8Q9UN66 801 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 PCDHB13Q9Y5F0 798 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 HSCBQ8IWL3 235 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 BANK1Q8NDB2 785 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 VTI1AQ96AJ9 217 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 RWDD1Q9H446 243 aaPredicted RBP8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 LETM1O95202 739 aaPredicted RBP8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 MSNP26038 577 aaKnown RBP8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 HSP90AB4PQ58FF6 505 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 ZNF710Q8N1W2 664 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 MYRIPQ8NFW9 859 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 STAC3Q96MF2 364 aa8.23□□□□□ -1.09
CDKAL1-202ENST00000378610 PLCD4Q9BRC7 762 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 PHF8Q9UPP1 1060 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 ERVK-7P63135 1459 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 SBNO2Q9Y2G9 1366 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 RECKO95980 971 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 ERCC3P19447 782 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 MNX1P50219 401 aaPredicted RBP8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 PDIA6Q15084 440 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 CDCA8Q53HL2 280 aa8.22□□□□□ -1.09
CDKAL1-202ENST00000378610 MAFGO15525 162 aa8.21□□□□□ -1.09
CDKAL1-202ENST00000378610 PEX14O75381 377 aa8.21□□□□□ -1.09
CDKAL1-202ENST00000378610 PDAP1Q13442 181 aaKnown RBP8.21□□□□□ -1.09
CDKAL1-202ENST00000378610 R3HCC1Q9Y3T6 440 aaKnown RBP8.21□□□□□ -1.09
CDKAL1-202ENST00000378610 NOS1P29475 1434 aa8.21□□□□□ -1.1
CDKAL1-202ENST00000378610 KIF16BQ96L93 1317 aa8.21□□□□□ -1.1
CDKAL1-202ENST00000378610 MVPQ14764 893 aaKnown RBP8.21□□□□□ -1.1
CDKAL1-202ENST00000378610 PPP1R12CQ9BZL4 782 aa8.21□□□□□ -1.1
CDKAL1-202ENST00000378610 FAM13BQ9NYF5 915 aa8.21□□□□□ -1.1
CDKAL1-202ENST00000378610 APAF1O14727 1248 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms