RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 UPF1Q92900 1129 aaKnown RBP eCLIP26.88■■□□□ 1.89
RER1-204ENST00000378518 SBF2Q86WG5 1849 aa26.88■■□□□ 1.89
RER1-204ENST00000378518 MARCH10Q8NA82 808 aaPredicted RBP26.87■■□□□ 1.89
RER1-204ENST00000378518 PRKRIP1Q9H875 184 aaPredicted RBP26.87■■□□□ 1.89
RER1-204ENST00000378518 NUDCQ9Y266 331 aa26.87■■□□□ 1.89
RER1-204ENST00000378518 SULT6B1Q6IMI4 303 aa26.86■■□□□ 1.89
RER1-204ENST00000378518 U2SURPO15042 1029 aaKnown RBP26.85■■□□□ 1.89
RER1-204ENST00000378518 CCDC125Q86Z20 511 aa26.85■■□□□ 1.89
RER1-204ENST00000378518 KDRP35968 1356 aa26.84■■□□□ 1.89
RER1-204ENST00000378518 DDX54Q8TDD1 881 aaKnown RBP26.84■■□□□ 1.89
RER1-204ENST00000378518 SPG7Q9UQ90 795 aa26.84■■□□□ 1.89
RER1-204ENST00000378518 PCDH11XQ9BZA7 1347 aa26.84■■□□□ 1.89
RER1-204ENST00000378518 PCDH11YQ9BZA8 1340 aa26.84■■□□□ 1.89
RER1-204ENST00000378518 BCL9O00512 1426 aa26.83■■□□□ 1.89
RER1-204ENST00000378518 SF3B2Q13435 895 aaKnown RBP26.83■■□□□ 1.89
RER1-204ENST00000378518 TNS1Q9HBL0 1735 aaKnown RBP26.82■■□□□ 1.88
RER1-204ENST00000378518 AEBP1Q8IUX7 1158 aa26.82■■□□□ 1.88
RER1-204ENST00000378518 EP400Q96L91 3159 aa26.82■■□□□ 1.88
RER1-204ENST00000378518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.81■■□□□ 1.88
RER1-204ENST00000378518 KAT6BQ8WYB5 2073 aa26.8■■□□□ 1.88
RER1-204ENST00000378518 ANP32CO43423 234 aa26.8■■□□□ 1.88
RER1-204ENST00000378518 HMOX1P09601 288 aa26.8■■□□□ 1.88
RER1-204ENST00000378518 NHSQ6T4R5 1651 aa26.79■■□□□ 1.88
RER1-204ENST00000378518 DOT1LQ8TEK3 1739 aa26.79■■□□□ 1.88
RER1-204ENST00000378518 AMOTQ4VCS5 1084 aa26.78■■□□□ 1.88
RER1-204ENST00000378518 PLEKHO1Q53GL0 409 aaPredicted RBP26.78■■□□□ 1.88
RER1-204ENST00000378518 TRIM37O94972 964 aa26.77■■□□□ 1.88
RER1-204ENST00000378518 U2AF1L5P0DN76 240 aaPredicted RBP26.75■■□□□ 1.87
RER1-204ENST00000378518 U2AF1Q01081 240 aaKnown RBP eCLIP26.75■■□□□ 1.87
RER1-204ENST00000378518 IFNL2Q8IZJ0 200 aa26.73■■□□□ 1.87
RER1-204ENST00000378518 CYP27B1O15528 508 aa26.72■■□□□ 1.87
RER1-204ENST00000378518 BAG6P46379 1132 aa26.71■■□□□ 1.87
RER1-204ENST00000378518 ZNF530Q6P9A1 599 aaPredicted RBP26.71■■□□□ 1.87
RER1-204ENST00000378518 ACSBG1Q96GR2 724 aa26.71■■□□□ 1.87
RER1-204ENST00000378518 C1orf141Q5JVX7 400 aa26.7■■□□□ 1.86
RER1-204ENST00000378518 BCL11BQ9C0K0 894 aaPredicted RBP26.7■■□□□ 1.86
RER1-204ENST00000378518 PHKG2P15735 406 aa26.69■■□□□ 1.86
RER1-204ENST00000378518 BTAF1O14981 1849 aa26.69■■□□□ 1.86
RER1-204ENST00000378518 TOGARAM1Q9Y4F4 1720 aa26.68■■□□□ 1.86
RER1-204ENST00000378518 ITGB4P16144 1822 aa26.68■■□□□ 1.86
RER1-204ENST00000378518 VIRMAQ69YN4 1812 aaKnown RBP26.68■■□□□ 1.86
RER1-204ENST00000378518 FCHSD2O94868 740 aa26.68■■□□□ 1.86
RER1-204ENST00000378518 APBA3O96018 575 aa26.68■■□□□ 1.86
RER1-204ENST00000378518 HSP90AB1P08238 724 aaKnown RBP26.68■■□□□ 1.86
RER1-204ENST00000378518 RSPH6AQ9H0K4 717 aa26.68■■□□□ 1.86
RER1-204ENST00000378518 RGPD3A6NKT7 1758 aaPredicted RBP26.68■■□□□ 1.86
RER1-204ENST00000378518 RGPD4Q7Z3J3 1758 aa26.68■■□□□ 1.86
RER1-204ENST00000378518 PRKAR2BP31323 418 aa26.67■■□□□ 1.86
RER1-204ENST00000378518 NKX1-1Q15270 411 aaPredicted RBP26.67■■□□□ 1.86
RER1-204ENST00000378518 NEFMP07197 916 aa26.66■■□□□ 1.86
RER1-204ENST00000378518 SYTL4Q96C24 671 aaPredicted RBP26.66■■□□□ 1.86
RER1-204ENST00000378518 PNNQ9H307 717 aaKnown RBP26.65■■□□□ 1.86
RER1-204ENST00000378518 KCNQ2O43526 872 aa26.64■■□□□ 1.86
RER1-204ENST00000378518 WDR43Q15061 677 aaKnown RBP eCLIP26.64■■□□□ 1.86
RER1-204ENST00000378518 GAS2L2Q8NHY3 880 aa26.64■■□□□ 1.86
RER1-204ENST00000378518 SCN11AQ9UI33 1791 aa26.63■■□□□ 1.85
RER1-204ENST00000378518 DEFB132Q7Z7B7 95 aa26.63■■□□□ 1.85
RER1-204ENST00000378518 PRIM1P49642 420 aaKnown RBP26.62■■□□□ 1.85
RER1-204ENST00000378518 MTHFSDQ2M296 383 aaKnown RBP26.62■■□□□ 1.85
RER1-204ENST00000378518 AKAP4Q5JQC9 854 aa26.62■■□□□ 1.85
RER1-204ENST00000378518 DCAF5Q96JK2 942 aa26.61■■□□□ 1.85
RER1-204ENST00000378518 EN1Q05925 392 aaPredicted RBP26.6■■□□□ 1.85
RER1-204ENST00000378518 PTF1AQ7RTS3 328 aa26.6■■□□□ 1.85
RER1-204ENST00000378518 RREB1Q92766 1687 aa26.59■■□□□ 1.85
RER1-204ENST00000378518 PLSCR1O15162 318 aa26.58■■□□□ 1.85
RER1-204ENST00000378518 MAPK8IP3Q9UPT6 1336 aa26.58■■□□□ 1.85
RER1-204ENST00000378518 PHACTR3Q96KR7 559 aa26.57■■□□□ 1.84
RER1-204ENST00000378518 KDM6AO15550 1401 aaPredicted RBP26.56■■□□□ 1.84
RER1-204ENST00000378518 MPRIPQ6WCQ1 1025 aa26.56■■□□□ 1.84
RER1-204ENST00000378518 TMOD3Q9NYL9 352 aa26.56■■□□□ 1.84
RER1-204ENST00000378518 MAP3K5Q99683 1374 aa26.56■■□□□ 1.84
RER1-204ENST00000378518 DLG5Q8TDM6 1919 aa26.55■■□□□ 1.84
RER1-204ENST00000378518 ADAMTS7Q9UKP4 1686 aa26.55■■□□□ 1.84
RER1-204ENST00000378518 ERVV-2B6SEH9 535 aa26.55■■□□□ 1.84
RER1-204ENST00000378518 EZH2Q15910 746 aaKnown RBP26.55■■□□□ 1.84
RER1-204ENST00000378518 CAMKK2Q96RR4 588 aa26.55■■□□□ 1.84
RER1-204ENST00000378518 MRS2Q9HD23 443 aa26.55■■□□□ 1.84
RER1-204ENST00000378518 LY75O60449 1722 aa26.53■■□□□ 1.84
RER1-204ENST00000378518 NUP188Q5SRE5 1749 aa26.53■■□□□ 1.84
RER1-204ENST00000378518 GNAT3A8MTJ3 354 aa26.53■■□□□ 1.84
RER1-204ENST00000378518 PLEKHF1Q96S99 279 aa26.53■■□□□ 1.84
RER1-204ENST00000378518 CABP4P57796 275 aa26.52■■□□□ 1.84
RER1-204ENST00000378518 CCDC184Q52MB2 194 aa26.5■■□□□ 1.83
RER1-204ENST00000378518 ADAMTS8Q9UP79 889 aa26.5■■□□□ 1.83
RER1-204ENST00000378518 RNMTO43148 476 aaKnown RBP26.49■■□□□ 1.83
RER1-204ENST00000378518 DIEXFQ68CQ4 756 aaKnown RBP26.49■■□□□ 1.83
RER1-204ENST00000378518 PIGBQ92521 554 aa26.49■■□□□ 1.83
RER1-204ENST00000378518 MRC1P22897 1456 aa26.49■■□□□ 1.83
RER1-204ENST00000378518 RTF1Q92541 710 aaKnown RBP26.48■■□□□ 1.83
RER1-204ENST00000378518 SMARCC1Q92922 1105 aaPredicted RBP26.48■■□□□ 1.83
RER1-204ENST00000378518 TXNRD1Q16881 649 aa26.47■■□□□ 1.83
RER1-204ENST00000378518 RUNDC1Q96C34 613 aa26.47■■□□□ 1.83
RER1-204ENST00000378518 LGR6Q9HBX8 967 aa26.47■■□□□ 1.83
RER1-204ENST00000378518 NFE2L2Q16236 605 aa26.46■■□□□ 1.83
RER1-204ENST00000378518 CCDC146Q8IYE0 955 aa26.46■■□□□ 1.83
RER1-204ENST00000378518 PALLDQ8WX93 1383 aa26.46■■□□□ 1.83
RER1-204ENST00000378518 SLC52A2Q9HAB3 445 aa26.45■■□□□ 1.82
RER1-204ENST00000378518 SIPA1L3O60292 1781 aaPredicted RBP26.45■■□□□ 1.82
RER1-204ENST00000378518 HTATSF1O43719 755 aaKnown RBP26.44■■□□□ 1.82
RER1-204ENST00000378518 NFATC2IPQ8NCF5 419 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms