RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
DEPDC4-202ENST00000378244 BRWD3Q6RI45 1802 aa15.68■□□□□ 0.1
DEPDC4-202ENST00000378244 OVOS2A0A0G2JMS6 1433 aa15.66■□□□□ 0.1
DEPDC4-202ENST00000378244 LRRC37A3O60309 1634 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 NCAPD2Q15021 1401 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 KDRP35968 1356 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 CYP27B1O15528 508 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 ACSBG1Q96GR2 724 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 TRIM37O94972 964 aa15.63■□□□□ 0.09
DEPDC4-202ENST00000378244 FAM196AQ6ZSG2 479 aa15.63■□□□□ 0.09
DEPDC4-202ENST00000378244 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
DEPDC4-202ENST00000378244 WDR43Q15061 677 aaKnown RBP eCLIP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PLEKHO1Q53GL0 409 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 SYTL4Q96C24 671 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 ZNF530Q6P9A1 599 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 RGPD1P0DJD0 1748 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 KCNQ2O43526 872 aa15.61■□□□□ 0.09
DEPDC4-202ENST00000378244 FCHSD2O94868 740 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 UPF1Q92900 1129 aaKnown RBP eCLIP15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 PHKG2P15735 406 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 SOCS7O14512 581 aa15.58■□□□□ 0.08
DEPDC4-202ENST00000378244 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
DEPDC4-202ENST00000378244 MIER1Q8N108 512 aa15.58■□□□□ 0.08
DEPDC4-202ENST00000378244 NEFMP07197 916 aa15.57■□□□□ 0.08
DEPDC4-202ENST00000378244 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
DEPDC4-202ENST00000378244 DEFB132Q7Z7B7 95 aa15.56■□□□□ 0.08
DEPDC4-202ENST00000378244 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
DEPDC4-202ENST00000378244 APBA3O96018 575 aa15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 MAPK8IP3Q9UPT6 1336 aa15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 SHANK3Q9BYB0 1731 aa15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 RRP7AQ9Y3A4 280 aaKnown RBP15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 AKAP4Q5JQC9 854 aa15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 PKD1L3Q7Z443 1732 aa15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.08
DEPDC4-202ENST00000378244 DCAF5Q96JK2 942 aa15.52■□□□□ 0.08
DEPDC4-202ENST00000378244 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.07
DEPDC4-202ENST00000378244 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.07
DEPDC4-202ENST00000378244 GNAT3A8MTJ3 354 aa15.51■□□□□ 0.07
DEPDC4-202ENST00000378244 DCTN1Q14203 1278 aa15.51■□□□□ 0.07
DEPDC4-202ENST00000378244 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
DEPDC4-202ENST00000378244 CABP4P57796 275 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 MCM10Q7L590 875 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 NFATC2IPQ8NCF5 419 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 BAG6P46379 1132 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 PIGBQ92521 554 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 BCL9O00512 1426 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 MAP3K5Q99683 1374 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 APAF1O14727 1248 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 RNMTO43148 476 aaKnown RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 RIPK4P57078 832 aa15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 EZH2Q15910 746 aaKnown RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 NFE2L2Q16236 605 aa15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 KCNQ4P56696 695 aa15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 THUMPD2Q9BTF0 503 aaKnown RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 SALL2Q9Y467 1007 aaPredicted RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 DOT1LQ8TEK3 1739 aa15.47■□□□□ 0.07
DEPDC4-202ENST00000378244 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
DEPDC4-202ENST00000378244 SRCAPQ6ZRS2 3230 aa15.47■□□□□ 0.07
DEPDC4-202ENST00000378244 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 ASAP1Q9ULH1 1129 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 CCER2I3L3R5 266 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 TEFQ10587 303 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 SBF2Q86WG5 1849 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 SLC52A2Q9HAB3 445 aa15.45■□□□□ 0.06
DEPDC4-202ENST00000378244 TOGARAM1Q9Y4F4 1720 aa15.44■□□□□ 0.06
DEPDC4-202ENST00000378244 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
DEPDC4-202ENST00000378244 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms