RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
HLA-F-218ENST00000376861 ZCRB1Q8TBF4 217 aaKnown RBP22.55■■□□□ 1.2
HLA-F-218ENST00000376861 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
HLA-F-218ENST00000376861 SPG7Q9UQ90 795 aa22.55■■□□□ 1.2
HLA-F-218ENST00000376861 DISP2A7MBM2 1401 aa22.54■■□□□ 1.2
HLA-F-218ENST00000376861 MEGF6O75095 1541 aa22.54■■□□□ 1.2
HLA-F-218ENST00000376861 BRWD3Q6RI45 1802 aa22.53■■□□□ 1.2
HLA-F-218ENST00000376861 NCAPD2Q15021 1401 aa22.53■■□□□ 1.2
HLA-F-218ENST00000376861 DDX54Q8TDD1 881 aaKnown RBP22.52■■□□□ 1.2
HLA-F-218ENST00000376861 LRRC37A3O60309 1634 aa22.52■■□□□ 1.2
HLA-F-218ENST00000376861 OVOS2A0A0G2JMS6 1433 aa22.52■■□□□ 1.2
HLA-F-218ENST00000376861 PLEKHO1Q53GL0 409 aaPredicted RBP22.52■■□□□ 1.19
HLA-F-218ENST00000376861 KDRP35968 1356 aa22.51■■□□□ 1.19
HLA-F-218ENST00000376861 TNS2Q63HR2 1409 aa22.51■■□□□ 1.19
HLA-F-218ENST00000376861 AMOTQ4VCS5 1084 aa22.51■■□□□ 1.19
HLA-F-218ENST00000376861 FCHSD2O94868 740 aa22.5■■□□□ 1.19
HLA-F-218ENST00000376861 PCDH11XQ9BZA7 1347 aa22.49■■□□□ 1.19
HLA-F-218ENST00000376861 PCDH11YQ9BZA8 1340 aa22.49■■□□□ 1.19
HLA-F-218ENST00000376861 PRKAR2BP31323 418 aa22.48■■□□□ 1.19
HLA-F-218ENST00000376861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.48■■□□□ 1.19
HLA-F-218ENST00000376861 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
HLA-F-218ENST00000376861 PNISRQ8TF01 805 aaKnown RBP22.47■■□□□ 1.19
HLA-F-218ENST00000376861 MAPK8IP3Q9UPT6 1336 aa22.47■■□□□ 1.19
HLA-F-218ENST00000376861 PLEKHG2Q9H7P9 1386 aa22.47■■□□□ 1.19
HLA-F-218ENST00000376861 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
HLA-F-218ENST00000376861 RSPH6AQ9H0K4 717 aa22.47■■□□□ 1.19
HLA-F-218ENST00000376861 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
HLA-F-218ENST00000376861 FAM196AQ6ZSG2 479 aa22.46■■□□□ 1.19
HLA-F-218ENST00000376861 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
HLA-F-218ENST00000376861 ZNF530Q6P9A1 599 aaPredicted RBP22.45■■□□□ 1.18
HLA-F-218ENST00000376861 IFNL2Q8IZJ0 200 aa22.44■■□□□ 1.18
HLA-F-218ENST00000376861 MARCH10Q8NA82 808 aaPredicted RBP22.44■■□□□ 1.18
HLA-F-218ENST00000376861 PKD1L3Q7Z443 1732 aa22.44■■□□□ 1.18
HLA-F-218ENST00000376861 ADAMTS8Q9UP79 889 aa22.43■■□□□ 1.18
HLA-F-218ENST00000376861 GAS2L2Q8NHY3 880 aa22.42■■□□□ 1.18
HLA-F-218ENST00000376861 KAT6BQ8WYB5 2073 aa22.41■■□□□ 1.18
HLA-F-218ENST00000376861 HSP90AB1P08238 724 aaKnown RBP22.41■■□□□ 1.18
HLA-F-218ENST00000376861 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
HLA-F-218ENST00000376861 CYP27B1O15528 508 aa22.39■■□□□ 1.17
HLA-F-218ENST00000376861 PHKG2P15735 406 aa22.39■■□□□ 1.17
HLA-F-218ENST00000376861 MTHFSDQ2M296 383 aaKnown RBP22.39■■□□□ 1.17
HLA-F-218ENST00000376861 SHANK3Q9BYB0 1731 aa22.39■■□□□ 1.17
HLA-F-218ENST00000376861 SF3B2Q13435 895 aaKnown RBP22.38■■□□□ 1.17
HLA-F-218ENST00000376861 AKAP4Q5JQC9 854 aa22.38■■□□□ 1.17
HLA-F-218ENST00000376861 CCDC146Q8IYE0 955 aa22.38■■□□□ 1.17
HLA-F-218ENST00000376861 SYTL4Q96C24 671 aaPredicted RBP22.37■■□□□ 1.17
HLA-F-218ENST00000376861 RUNDC1Q96C34 613 aa22.37■■□□□ 1.17
HLA-F-218ENST00000376861 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
HLA-F-218ENST00000376861 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
HLA-F-218ENST00000376861 ACSBG1Q96GR2 724 aa22.36■■□□□ 1.17
HLA-F-218ENST00000376861 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
HLA-F-218ENST00000376861 GNAT3A8MTJ3 354 aa22.34■■□□□ 1.17
HLA-F-218ENST00000376861 TRIM37O94972 964 aa22.34■■□□□ 1.17
HLA-F-218ENST00000376861 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
HLA-F-218ENST00000376861 NKX1-1Q15270 411 aaPredicted RBP22.32■■□□□ 1.16
HLA-F-218ENST00000376861 MPRIPQ6WCQ1 1025 aa22.32■■□□□ 1.16
HLA-F-218ENST00000376861 BCL9O00512 1426 aa22.32■■□□□ 1.16
HLA-F-218ENST00000376861 MAP3K5Q99683 1374 aa22.32■■□□□ 1.16
HLA-F-218ENST00000376861 NFE2L2Q16236 605 aa22.31■■□□□ 1.16
HLA-F-218ENST00000376861 CCDC125Q86Z20 511 aa22.31■■□□□ 1.16
HLA-F-218ENST00000376861 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
HLA-F-218ENST00000376861 DOT1LQ8TEK3 1739 aa22.3■■□□□ 1.16
HLA-F-218ENST00000376861 SBF2Q86WG5 1849 aa22.3■■□□□ 1.16
HLA-F-218ENST00000376861 PRIM1P49642 420 aaKnown RBP22.3■■□□□ 1.16
HLA-F-218ENST00000376861 CABP4P57796 275 aa22.29■■□□□ 1.16
HLA-F-218ENST00000376861 BCL11BQ9C0K0 894 aaPredicted RBP22.29■■□□□ 1.16
HLA-F-218ENST00000376861 TMOD3Q9NYL9 352 aa22.29■■□□□ 1.16
HLA-F-218ENST00000376861 RIPK4P57078 832 aa22.28■■□□□ 1.16
HLA-F-218ENST00000376861 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
HLA-F-218ENST00000376861 LMOD3Q0VAK6 560 aa22.28■■□□□ 1.16
HLA-F-218ENST00000376861 ERVV-2B6SEH9 535 aa22.27■■□□□ 1.16
HLA-F-218ENST00000376861 KCNQ2O43526 872 aa22.27■■□□□ 1.16
HLA-F-218ENST00000376861 TMPOP42166 694 aaKnown RBP22.27■■□□□ 1.16
HLA-F-218ENST00000376861 EP400Q96L91 3159 aa22.27■■□□□ 1.16
HLA-F-218ENST00000376861 APAF1O14727 1248 aa22.26■■□□□ 1.15
HLA-F-218ENST00000376861 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
HLA-F-218ENST00000376861 APBA3O96018 575 aa22.26■■□□□ 1.15
HLA-F-218ENST00000376861 TEFQ10587 303 aa22.26■■□□□ 1.15
HLA-F-218ENST00000376861 NHSQ6T4R5 1651 aa22.26■■□□□ 1.15
HLA-F-218ENST00000376861 RNMTO43148 476 aaKnown RBP22.26■■□□□ 1.15
HLA-F-218ENST00000376861 UPF1Q92900 1129 aaKnown RBP eCLIP22.26■■□□□ 1.15
HLA-F-218ENST00000376861 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
HLA-F-218ENST00000376861 VIRMAQ69YN4 1812 aaKnown RBP22.25■■□□□ 1.15
HLA-F-218ENST00000376861 SCN11AQ9UI33 1791 aa22.25■■□□□ 1.15
HLA-F-218ENST00000376861 DLG5Q8TDM6 1919 aa22.25■■□□□ 1.15
HLA-F-218ENST00000376861 BAG6P46379 1132 aa22.25■■□□□ 1.15
HLA-F-218ENST00000376861 LGR6Q9HBX8 967 aa22.24■■□□□ 1.15
HLA-F-218ENST00000376861 ITGB4P16144 1822 aa22.24■■□□□ 1.15
HLA-F-218ENST00000376861 KDM6AO15550 1401 aaPredicted RBP22.23■■□□□ 1.15
HLA-F-218ENST00000376861 MCM10Q7L590 875 aa22.22■■□□□ 1.15
HLA-F-218ENST00000376861 NFATC2IPQ8NCF5 419 aa22.22■■□□□ 1.15
HLA-F-218ENST00000376861 TOGARAM1Q9Y4F4 1720 aa22.22■■□□□ 1.15
HLA-F-218ENST00000376861 SLC52A2Q9HAB3 445 aa22.21■■□□□ 1.15
HLA-F-218ENST00000376861 DCTN1Q14203 1278 aa22.21■■□□□ 1.15
HLA-F-218ENST00000376861 IL17REQ8NFR9 667 aa22.21■■□□□ 1.15
HLA-F-218ENST00000376861 BTAF1O14981 1849 aa22.2■■□□□ 1.14
HLA-F-218ENST00000376861 PIGBQ92521 554 aa22.2■■□□□ 1.14
HLA-F-218ENST00000376861 TNS1Q9HBL0 1735 aaKnown RBP22.19■■□□□ 1.14
HLA-F-218ENST00000376861 SOCS7O14512 581 aa22.19■■□□□ 1.14
HLA-F-218ENST00000376861 PTF1AQ7RTS3 328 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms