RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 MEGF6O75095 1541 aa25.71■■□□□ 1.71
HDAC6-202ENST00000376610 PRIM1P49642 420 aaKnown RBP25.7■■□□□ 1.7
HDAC6-202ENST00000376610 NBPF6Q5VWK0 638 aa25.7■■□□□ 1.7
HDAC6-202ENST00000376610 NBPF4Q96M43 638 aa25.7■■□□□ 1.7
HDAC6-202ENST00000376610 LRRC4BQ9NT99 713 aa25.7■■□□□ 1.7
HDAC6-202ENST00000376610 ZNF827Q17R98 1081 aa25.69■■□□□ 1.7
HDAC6-202ENST00000376610 FLT4P35916 1363 aa25.69■■□□□ 1.7
HDAC6-202ENST00000376610 KIF24Q5T7B8 1368 aa25.69■■□□□ 1.7
HDAC6-202ENST00000376610 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
HDAC6-202ENST00000376610 FHDC1Q9C0D6 1143 aaPredicted RBP25.68■■□□□ 1.7
HDAC6-202ENST00000376610 SHANK3Q9BYB0 1731 aa25.68■■□□□ 1.7
HDAC6-202ENST00000376610 INSRP06213 1382 aa25.68■■□□□ 1.7
HDAC6-202ENST00000376610 USHBP1Q8N6Y0 703 aa25.67■■□□□ 1.7
HDAC6-202ENST00000376610 ARXQ96QS3 562 aa25.66■■□□□ 1.7
HDAC6-202ENST00000376610 SYT17Q9BSW7 474 aa25.66■■□□□ 1.7
HDAC6-202ENST00000376610 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
HDAC6-202ENST00000376610 NSD3Q9BZ95 1437 aa25.65■■□□□ 1.7
HDAC6-202ENST00000376610 HSP90AB2PQ58FF8 381 aa25.65■■□□□ 1.7
HDAC6-202ENST00000376610 AKT1S1Q96B36 256 aa25.65■■□□□ 1.7
HDAC6-202ENST00000376610 SGIP1Q9BQI5 828 aa25.65■■□□□ 1.7
HDAC6-202ENST00000376610 QSER1Q2KHR3 1735 aa25.64■■□□□ 1.7
HDAC6-202ENST00000376610 SLC16A10Q8TF71 515 aa25.64■■□□□ 1.7
HDAC6-202ENST00000376610 TFCP2L1Q9NZI6 479 aa25.64■■□□□ 1.7
HDAC6-202ENST00000376610 LY75O60449 1722 aa25.63■■□□□ 1.69
HDAC6-202ENST00000376610 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
HDAC6-202ENST00000376610 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
HDAC6-202ENST00000376610 PCGF6Q9BYE7 350 aa25.62■■□□□ 1.69
HDAC6-202ENST00000376610 CCNL1Q9UK58 526 aaPredicted RBP25.62■■□□□ 1.69
HDAC6-202ENST00000376610 NSD2O96028 1365 aa25.61■■□□□ 1.69
HDAC6-202ENST00000376610 POLD1P28340 1107 aa25.61■■□□□ 1.69
HDAC6-202ENST00000376610 CARD14Q9BXL6 1004 aa25.61■■□□□ 1.69
HDAC6-202ENST00000376610 HMGB2P26583 209 aaKnown RBP25.59■■□□□ 1.69
HDAC6-202ENST00000376610 KCNQ4P56696 695 aa25.59■■□□□ 1.69
HDAC6-202ENST00000376610 PNPLA7Q6ZV29 1317 aa25.59■■□□□ 1.69
HDAC6-202ENST00000376610 PPM1GO15355 546 aaPredicted RBP25.58■■□□□ 1.69
HDAC6-202ENST00000376610 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.69
HDAC6-202ENST00000376610 MAP3K5Q99683 1374 aa25.57■■□□□ 1.68
HDAC6-202ENST00000376610 TUBGCP6Q96RT7 1819 aa25.56■■□□□ 1.68
HDAC6-202ENST00000376610 POLR3GLQ9BT43 218 aa25.56■■□□□ 1.68
HDAC6-202ENST00000376610 KLHL34Q8N239 644 aa25.55■■□□□ 1.68
HDAC6-202ENST00000376610 MSH5O43196 834 aa25.53■■□□□ 1.68
HDAC6-202ENST00000376610 UTRNP46939 3433 aa25.53■■□□□ 1.68
HDAC6-202ENST00000376610 MAP2P11137 1827 aaKnown RBP25.52■■□□□ 1.68
HDAC6-202ENST00000376610 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
HDAC6-202ENST00000376610 ANKRD26Q9UPS8 1709 aa25.51■■□□□ 1.68
HDAC6-202ENST00000376610 CHD4Q14839 1912 aa25.51■■□□□ 1.67
HDAC6-202ENST00000376610 CYP27B1O15528 508 aa25.5■■□□□ 1.67
HDAC6-202ENST00000376610 WASHC2AQ641Q2 1341 aa25.5■■□□□ 1.67
HDAC6-202ENST00000376610 PKD1L3Q7Z443 1732 aa25.5■■□□□ 1.67
HDAC6-202ENST00000376610 SPG7Q9UQ90 795 aa25.5■■□□□ 1.67
HDAC6-202ENST00000376610 COL24A1Q17RW2 1714 aa25.49■■□□□ 1.67
HDAC6-202ENST00000376610 C5P01031 1676 aa25.49■■□□□ 1.67
HDAC6-202ENST00000376610 PALLDQ8WX93 1383 aa25.49■■□□□ 1.67
HDAC6-202ENST00000376610 GPR162Q16538 588 aa25.48■■□□□ 1.67
HDAC6-202ENST00000376610 SMARCC1Q92922 1105 aaPredicted RBP25.48■■□□□ 1.67
HDAC6-202ENST00000376610 EIF4G2P78344 907 aaKnown RBP eCLIP25.47■■□□□ 1.67
HDAC6-202ENST00000376610 ITGB4P16144 1822 aa25.47■■□□□ 1.67
HDAC6-202ENST00000376610 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
HDAC6-202ENST00000376610 FLAD1Q8NFF5 587 aa25.46■■□□□ 1.67
HDAC6-202ENST00000376610 TOGARAM1Q9Y4F4 1720 aa25.44■■□□□ 1.66
HDAC6-202ENST00000376610 COL23A1Q86Y22 540 aaPredicted RBP25.44■■□□□ 1.66
HDAC6-202ENST00000376610 EYA1Q99502 592 aa25.44■■□□□ 1.66
HDAC6-202ENST00000376610 POLKQ9UBT6 870 aa25.44■■□□□ 1.66
HDAC6-202ENST00000376610 TAF1LQ8IZX4 1826 aa25.43■■□□□ 1.66
HDAC6-202ENST00000376610 TNNT2P45379 298 aaPredicted RBP25.43■■□□□ 1.66
HDAC6-202ENST00000376610 PELP1Q8IZL8 1130 aaKnown RBP25.43■■□□□ 1.66
HDAC6-202ENST00000376610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.43■■□□□ 1.661e-11■■□□□ 11.5
HDAC6-202ENST00000376610 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
HDAC6-202ENST00000376610 ZNF784Q8NCA9 323 aaPredicted RBP25.42■■□□□ 1.66
HDAC6-202ENST00000376610 AK7Q96M32 723 aa25.41■■□□□ 1.66
HDAC6-202ENST00000376610 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
HDAC6-202ENST00000376610 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
HDAC6-202ENST00000376610 PIGBQ92521 554 aa25.4■■□□□ 1.66
HDAC6-202ENST00000376610 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
HDAC6-202ENST00000376610 MSL1Q68DK7 614 aa25.39■■□□□ 1.66
HDAC6-202ENST00000376610 IFNL2Q8IZJ0 200 aa25.39■■□□□ 1.66
HDAC6-202ENST00000376610 C4BP0C0L5 1744 aa25.37■■□□□ 1.65
HDAC6-202ENST00000376610 EIF4A2Q14240 407 aaKnown RBP25.37■■□□□ 1.65
HDAC6-202ENST00000376610 PANK3Q9H999 370 aa25.37■■□□□ 1.65
HDAC6-202ENST00000376610 PLEKHG2Q9H7P9 1386 aa25.36■■□□□ 1.65
HDAC6-202ENST00000376610 NLGN2Q8NFZ4 835 aa25.36■■□□□ 1.65
HDAC6-202ENST00000376610 PHKG2P15735 406 aa25.35■■□□□ 1.65
HDAC6-202ENST00000376610 LOC102724428A0A0B4J2F2 783 aa25.33■■□□□ 1.65
HDAC6-202ENST00000376610 SIK1P57059 783 aa25.33■■□□□ 1.65
HDAC6-202ENST00000376610 GRIN3BO60391 1043 aa25.32■■□□□ 1.64
HDAC6-202ENST00000376610 PHF14O94880 888 aa25.32■■□□□ 1.64
HDAC6-202ENST00000376610 UBR3Q6ZT12 1888 aa25.31■■□□□ 1.64
HDAC6-202ENST00000376610 IGSF1Q8N6C5 1336 aa25.31■■□□□ 1.64
HDAC6-202ENST00000376610 HSP90AB1P08238 724 aaKnown RBP25.3■■□□□ 1.64
HDAC6-202ENST00000376610 SSFA2P28290 1259 aa25.3■■□□□ 1.64
HDAC6-202ENST00000376610 MORC1Q86VD1 984 aa25.3■■□□□ 1.64
HDAC6-202ENST00000376610 CD2APQ9Y5K6 639 aa25.3■■□□□ 1.64
HDAC6-202ENST00000376610 GOLGB1Q14789 3259 aaKnown RBP25.3■■□□□ 1.64
HDAC6-202ENST00000376610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.29■■□□□ 1.64
HDAC6-202ENST00000376610 ATP6V1AP38606 617 aa25.29■■□□□ 1.64
HDAC6-202ENST00000376610 ASAP1Q9ULH1 1129 aa25.29■■□□□ 1.64
HDAC6-202ENST00000376610 KNSTRNQ9Y448 316 aa25.29■■□□□ 1.64
HDAC6-202ENST00000376610 PLEKHO1Q53GL0 409 aaPredicted RBP25.28■■□□□ 1.64
HDAC6-202ENST00000376610 LINC00116Q8NCU8 138 aa25.27■■□□□ 1.64
HDAC6-202ENST00000376610 ERVV-2B6SEH9 535 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms