RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 MEGF6O75095 1541 aa18.57■□□□□ 0.56
CLCN6-205ENST00000376492 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
CLCN6-205ENST00000376492 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
CLCN6-205ENST00000376492 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
CLCN6-205ENST00000376492 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
CLCN6-205ENST00000376492 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
CLCN6-205ENST00000376492 HOXC9P31274 260 aa18.55■□□□□ 0.56
CLCN6-205ENST00000376492 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
CLCN6-205ENST00000376492 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
CLCN6-205ENST00000376492 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
CLCN6-205ENST00000376492 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
CLCN6-205ENST00000376492 CCNL1Q9UK58 526 aaPredicted RBP18.53■□□□□ 0.56
CLCN6-205ENST00000376492 LY75O60449 1722 aa18.52■□□□□ 0.56
CLCN6-205ENST00000376492 GIGYF1O75420 1035 aaPredicted RBP18.52■□□□□ 0.56
CLCN6-205ENST00000376492 AMPHP49418 695 aa18.52■□□□□ 0.56
CLCN6-205ENST00000376492 COG3Q96JB2 828 aa18.52■□□□□ 0.56
CLCN6-205ENST00000376492 YBX3P16989 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLCN6-205ENST00000376492 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
CLCN6-205ENST00000376492 MSH5O43196 834 aa18.5■□□□□ 0.55
CLCN6-205ENST00000376492 MSL1Q68DK7 614 aa18.5■□□□□ 0.55
CLCN6-205ENST00000376492 COL23A1Q86Y22 540 aaPredicted RBP18.5■□□□□ 0.55
CLCN6-205ENST00000376492 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
CLCN6-205ENST00000376492 TESK2Q96S53 571 aa18.5■□□□□ 0.55
CLCN6-205ENST00000376492 RGPD2P0DJD1 1756 aa18.5■□□□□ 0.55
CLCN6-205ENST00000376492 RRS1Q15050 365 aaKnown RBP18.49■□□□□ 0.55
CLCN6-205ENST00000376492 USP47Q96K76 1375 aa18.48■□□□□ 0.55
CLCN6-205ENST00000376492 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
CLCN6-205ENST00000376492 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
CLCN6-205ENST00000376492 RTL1A6NKG5 1358 aa18.47■□□□□ 0.55
CLCN6-205ENST00000376492 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
CLCN6-205ENST00000376492 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
CLCN6-205ENST00000376492 CEP350Q5VT06 3117 aa18.46■□□□□ 0.55
CLCN6-205ENST00000376492 GRIN3BO60391 1043 aa18.43■□□□□ 0.54
CLCN6-205ENST00000376492 RAPGEF4Q8WZA2 1011 aa18.43■□□□□ 0.54
CLCN6-205ENST00000376492 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
CLCN6-205ENST00000376492 SMG6Q86US8 1419 aaKnown RBP18.42■□□□□ 0.54
CLCN6-205ENST00000376492 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
CLCN6-205ENST00000376492 C5P01031 1676 aa18.42■□□□□ 0.54
CLCN6-205ENST00000376492 CGNL1Q0VF96 1302 aa18.42■□□□□ 0.54
CLCN6-205ENST00000376492 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
CLCN6-205ENST00000376492 FYB1O15117 783 aa18.41■□□□□ 0.54
CLCN6-205ENST00000376492 AMIGO3Q86WK7 504 aa18.41■□□□□ 0.54
CLCN6-205ENST00000376492 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-205ENST00000376492 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
CLCN6-205ENST00000376492 PCDH11XQ9BZA7 1347 aa18.4■□□□□ 0.54
CLCN6-205ENST00000376492 PCDH11YQ9BZA8 1340 aa18.4■□□□□ 0.54
CLCN6-205ENST00000376492 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
CLCN6-205ENST00000376492 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
CLCN6-205ENST00000376492 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
CLCN6-205ENST00000376492 CD2APQ9Y5K6 639 aa18.38■□□□□ 0.53
CLCN6-205ENST00000376492 CYP27B1O15528 508 aa18.37■□□□□ 0.53
CLCN6-205ENST00000376492 INSRP06213 1382 aa18.37■□□□□ 0.53
CLCN6-205ENST00000376492 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
CLCN6-205ENST00000376492 FLT4P35916 1363 aa18.36■□□□□ 0.53
CLCN6-205ENST00000376492 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
CLCN6-205ENST00000376492 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
CLCN6-205ENST00000376492 ADCY9O60503 1353 aa18.35■□□□□ 0.53
CLCN6-205ENST00000376492 PHF14O94880 888 aa18.35■□□□□ 0.53
CLCN6-205ENST00000376492 FLAD1Q8NFF5 587 aa18.35■□□□□ 0.53
CLCN6-205ENST00000376492 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
CLCN6-205ENST00000376492 AK7Q96M32 723 aa18.34■□□□□ 0.53
CLCN6-205ENST00000376492 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.53
CLCN6-205ENST00000376492 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
CLCN6-205ENST00000376492 GPBP1L1Q9HC44 474 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-205ENST00000376492 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
CLCN6-205ENST00000376492 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
CLCN6-205ENST00000376492 IGSF1Q8N6C5 1336 aa18.32■□□□□ 0.52
CLCN6-205ENST00000376492 SLC24A1O60721 1099 aa18.32■□□□□ 0.52
CLCN6-205ENST00000376492 TMF1P82094 1093 aa18.32■□□□□ 0.52
CLCN6-205ENST00000376492 PIGBQ92521 554 aa18.32■□□□□ 0.52
CLCN6-205ENST00000376492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.31■□□□□ 0.52
CLCN6-205ENST00000376492 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CLCN6-205ENST00000376492 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
CLCN6-205ENST00000376492 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
CLCN6-205ENST00000376492 PKD1L3Q7Z443 1732 aa18.3■□□□□ 0.52
CLCN6-205ENST00000376492 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
CLCN6-205ENST00000376492 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
CLCN6-205ENST00000376492 NCAPD2Q15021 1401 aa18.29■□□□□ 0.52
CLCN6-205ENST00000376492 UBR3Q6ZT12 1888 aa18.28■□□□□ 0.52
CLCN6-205ENST00000376492 ITGB4P16144 1822 aa18.28■□□□□ 0.52
CLCN6-205ENST00000376492 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
CLCN6-205ENST00000376492 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
CLCN6-205ENST00000376492 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.52
CLCN6-205ENST00000376492 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.52
CLCN6-205ENST00000376492 SSFA2P28290 1259 aa18.27■□□□□ 0.52
CLCN6-205ENST00000376492 SIK1P57059 783 aa18.27■□□□□ 0.52
CLCN6-205ENST00000376492 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
CLCN6-205ENST00000376492 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
CLCN6-205ENST00000376492 HSPA6P17066 643 aa18.26■□□□□ 0.51
CLCN6-205ENST00000376492 ITPK1Q13572 414 aa18.26■□□□□ 0.51
CLCN6-205ENST00000376492 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
CLCN6-205ENST00000376492 GNPATO15228 680 aa18.25■□□□□ 0.51
CLCN6-205ENST00000376492 ASAP1Q9ULH1 1129 aa18.25■□□□□ 0.51
CLCN6-205ENST00000376492 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
CLCN6-205ENST00000376492 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
CLCN6-205ENST00000376492 EYA1Q99502 592 aa18.23■□□□□ 0.51
CLCN6-205ENST00000376492 MMP10P09238 476 aa18.22■□□□□ 0.51
CLCN6-205ENST00000376492 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
CLCN6-205ENST00000376492 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms