RNA–Protein interactions for RNA: ENST00000376386.3

PRAF2-201, Transcript of PRA1 domain family member 2, humanhuman

TSL 2 BASIC

Gene PRAF2, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-201ENST00000376386 ANKRD36BQ8N2N9 1353 aa21.32■■□□□ 1
PRAF2-201ENST00000376386 CHD4Q14839 1912 aa21.31■■□□□ 1
PRAF2-201ENST00000376386 POLD1P28340 1107 aa21.31■■□□□ 1
PRAF2-201ENST00000376386 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
PRAF2-201ENST00000376386 RGPD2P0DJD1 1756 aa21.31■■□□□ 1
PRAF2-201ENST00000376386 SLC24A1O60721 1099 aa21.3■■□□□ 1
PRAF2-201ENST00000376386 GPR162Q16538 588 aa21.3■■□□□ 1
PRAF2-201ENST00000376386 MEGF6O75095 1541 aa21.29■■□□□ 1
PRAF2-201ENST00000376386 NBPF6Q5VWK0 638 aa21.29■■□□□ 1
PRAF2-201ENST00000376386 NBPF4Q96M43 638 aa21.29■■□□□ 1
PRAF2-201ENST00000376386 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
PRAF2-201ENST00000376386 NSD2O96028 1365 aa21.28■■□□□ 1
PRAF2-201ENST00000376386 FYB1O15117 783 aa21.28■■□□□ 1
PRAF2-201ENST00000376386 USHBP1Q8N6Y0 703 aa21.28■■□□□ 1
PRAF2-201ENST00000376386 DOT1LQ8TEK3 1739 aa21.28■■□□□ 1
PRAF2-201ENST00000376386 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
PRAF2-201ENST00000376386 QSER1Q2KHR3 1735 aa21.26■□□□□ 0.99
PRAF2-201ENST00000376386 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
PRAF2-201ENST00000376386 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
PRAF2-201ENST00000376386 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
PRAF2-201ENST00000376386 TUBGCP6Q96RT7 1819 aa21.25■□□□□ 0.99
PRAF2-201ENST00000376386 LY75O60449 1722 aa21.24■□□□□ 0.99
PRAF2-201ENST00000376386 TMF1P82094 1093 aa21.24■□□□□ 0.99
PRAF2-201ENST00000376386 RAPGEF4Q8WZA2 1011 aa21.24■□□□□ 0.99
PRAF2-201ENST00000376386 USP47Q96K76 1375 aa21.23■□□□□ 0.99
PRAF2-201ENST00000376386 MSH5O43196 834 aa21.23■□□□□ 0.99
PRAF2-201ENST00000376386 NLGN2Q8NFZ4 835 aa21.23■□□□□ 0.99
PRAF2-201ENST00000376386 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
PRAF2-201ENST00000376386 HSP90AB2PQ58FF8 381 aa21.22■□□□□ 0.99
PRAF2-201ENST00000376386 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
PRAF2-201ENST00000376386 COL24A1Q17RW2 1714 aa21.21■□□□□ 0.99
PRAF2-201ENST00000376386 TATP17735 454 aaPredicted RBP21.21■□□□□ 0.99
PRAF2-201ENST00000376386 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
PRAF2-201ENST00000376386 C1QTNF8P60827 252 aa21.19■□□□□ 0.98
PRAF2-201ENST00000376386 MSL1Q68DK7 614 aa21.18■□□□□ 0.98
PRAF2-201ENST00000376386 INSRP06213 1382 aa21.18■□□□□ 0.98
PRAF2-201ENST00000376386 SENP3-EIF4A1A0A087X0R7 540 aa21.17■□□□□ 0.98
PRAF2-201ENST00000376386 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
PRAF2-201ENST00000376386 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
PRAF2-201ENST00000376386 FLT4P35916 1363 aa21.16■□□□□ 0.98
PRAF2-201ENST00000376386 MPRIPQ6WCQ1 1025 aa21.16■□□□□ 0.98
PRAF2-201ENST00000376386 CDCA8Q53HL2 280 aa21.15■□□□□ 0.98
PRAF2-201ENST00000376386 CYP27B1O15528 508 aa21.14■□□□□ 0.97
PRAF2-201ENST00000376386 YBX3P16989 372 aaKnown RBP eCLIP21.14■□□□□ 0.97
PRAF2-201ENST00000376386 PALLDQ8WX93 1383 aa21.13■□□□□ 0.97
PRAF2-201ENST00000376386 CARD14Q9BXL6 1004 aa21.13■□□□□ 0.97
PRAF2-201ENST00000376386 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
PRAF2-201ENST00000376386 KIF20BQ96Q89 1820 aa21.12■□□□□ 0.97
PRAF2-201ENST00000376386 KIF24Q5T7B8 1368 aa21.11■□□□□ 0.97
PRAF2-201ENST00000376386 GRIN3BO60391 1043 aa21.11■□□□□ 0.97
PRAF2-201ENST00000376386 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
PRAF2-201ENST00000376386 C5P01031 1676 aa21.11■□□□□ 0.97
PRAF2-201ENST00000376386 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
PRAF2-201ENST00000376386 FLAD1Q8NFF5 587 aa21.1■□□□□ 0.97
PRAF2-201ENST00000376386 HMGB2P26583 209 aaKnown RBP21.09■□□□□ 0.97
PRAF2-201ENST00000376386 NSD3Q9BZ95 1437 aa21.09■□□□□ 0.97
PRAF2-201ENST00000376386 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.97
PRAF2-201ENST00000376386 TAF1LQ8IZX4 1826 aa21.08■□□□□ 0.96
PRAF2-201ENST00000376386 PIGBQ92521 554 aa21.07■□□□□ 0.96
PRAF2-201ENST00000376386 AK7Q96M32 723 aa21.07■□□□□ 0.96
PRAF2-201ENST00000376386 CD2APQ9Y5K6 639 aa21.07■□□□□ 0.96
PRAF2-201ENST00000376386 ITGB4P16144 1822 aa21.06■□□□□ 0.96
PRAF2-201ENST00000376386 CEP350Q5VT06 3117 aa21.06■□□□□ 0.96
PRAF2-201ENST00000376386 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
PRAF2-201ENST00000376386 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
PRAF2-201ENST00000376386 TOGARAM1Q9Y4F4 1720 aa21.06■□□□□ 0.96
PRAF2-201ENST00000376386 PHF14O94880 888 aa21.05■□□□□ 0.96
PRAF2-201ENST00000376386 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
PRAF2-201ENST00000376386 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
PRAF2-201ENST00000376386 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
PRAF2-201ENST00000376386 EYA1Q99502 592 aa21.03■□□□□ 0.96
PRAF2-201ENST00000376386 PKD1L3Q7Z443 1732 aa21.03■□□□□ 0.96
PRAF2-201ENST00000376386 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
PRAF2-201ENST00000376386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
PRAF2-201ENST00000376386 NCAPD2Q15021 1401 aa21.02■□□□□ 0.96
PRAF2-201ENST00000376386 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
PRAF2-201ENST00000376386 SIK1P57059 783 aa21.01■□□□□ 0.95
PRAF2-201ENST00000376386 TRIM26Q12899 539 aaPredicted RBP21.01■□□□□ 0.95
PRAF2-201ENST00000376386 LINC00116Q8NCU8 138 aa21■□□□□ 0.95
PRAF2-201ENST00000376386 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
PRAF2-201ENST00000376386 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
PRAF2-201ENST00000376386 UBR3Q6ZT12 1888 aa20.99■□□□□ 0.95
PRAF2-201ENST00000376386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.99■□□□□ 0.95
PRAF2-201ENST00000376386 POLKQ9UBT6 870 aa20.99■□□□□ 0.95
PRAF2-201ENST00000376386 WWC3Q9ULE0 1092 aa20.99■□□□□ 0.95
PRAF2-201ENST00000376386 ASAP1Q9ULH1 1129 aa20.99■□□□□ 0.95
PRAF2-201ENST00000376386 ATP10DQ9P241 1426 aa20.98■□□□□ 0.95
PRAF2-201ENST00000376386 SSFA2P28290 1259 aa20.98■□□□□ 0.95
PRAF2-201ENST00000376386 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
PRAF2-201ENST00000376386 POLR3GLQ9BT43 218 aa20.98■□□□□ 0.95
PRAF2-201ENST00000376386 PHKG2P15735 406 aa20.97■□□□□ 0.95
PRAF2-201ENST00000376386 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
PRAF2-201ENST00000376386 TNNT2P45379 298 aaPredicted RBP20.97■□□□□ 0.95
PRAF2-201ENST00000376386 IGSF1Q8N6C5 1336 aa20.97■□□□□ 0.95
PRAF2-201ENST00000376386 ANKRD26Q9UPS8 1709 aa20.96■□□□□ 0.95
PRAF2-201ENST00000376386 ITPK1Q13572 414 aa20.96■□□□□ 0.95
PRAF2-201ENST00000376386 GNPATO15228 680 aa20.95■□□□□ 0.94
PRAF2-201ENST00000376386 GPBP1L1Q9HC44 474 aaPredicted RBP20.95■□□□□ 0.94
PRAF2-201ENST00000376386 EIF4A2Q14240 407 aaKnown RBP20.94■□□□□ 0.94
PRAF2-201ENST00000376386 ATG3Q9NT62 314 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms