RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 MAP3K5Q99683 1374 aa32.39■■■□□ 2.78
C9orf47-202ENST00000375850 FBLN1P23142 703 aa32.38■■■□□ 2.77
C9orf47-202ENST00000375850 PRIM1P49642 420 aaKnown RBP32.38■■■□□ 2.77
C9orf47-202ENST00000375850 SYTL4Q96C24 671 aaPredicted RBP32.38■■■□□ 2.77
C9orf47-202ENST00000375850 RRS1Q15050 365 aaKnown RBP32.37■■■□□ 2.77
C9orf47-202ENST00000375850 TIMELESSQ9UNS1 1208 aa32.37■■■□□ 2.77
C9orf47-202ENST00000375850 MEGF6O75095 1541 aa32.36■■■□□ 2.77
C9orf47-202ENST00000375850 HMGB2P26583 209 aaKnown RBP32.36■■■□□ 2.77
C9orf47-202ENST00000375850 RAPGEF4Q8WZA2 1011 aa32.36■■■□□ 2.77
C9orf47-202ENST00000375850 NBPF6Q5VWK0 638 aa32.35■■■□□ 2.77
C9orf47-202ENST00000375850 NBPF4Q96M43 638 aa32.35■■■□□ 2.77
C9orf47-202ENST00000375850 INSRP06213 1382 aa32.34■■■□□ 2.77
C9orf47-202ENST00000375850 KAT6BQ8WYB5 2073 aa32.33■■■□□ 2.77
C9orf47-202ENST00000375850 FLT4P35916 1363 aa32.32■■■□□ 2.77
C9orf47-202ENST00000375850 NSD2O96028 1365 aa32.32■■■□□ 2.76
C9orf47-202ENST00000375850 TATP17735 454 aaPredicted RBP32.31■■■□□ 2.76
C9orf47-202ENST00000375850 POLD1P28340 1107 aa32.31■■■□□ 2.76
C9orf47-202ENST00000375850 TFCP2L1Q9NZI6 479 aa32.31■■■□□ 2.76
C9orf47-202ENST00000375850 QSER1Q2KHR3 1735 aa32.29■■■□□ 2.76
C9orf47-202ENST00000375850 DOT1LQ8TEK3 1739 aa32.28■■■□□ 2.76
C9orf47-202ENST00000375850 PNPLA7Q6ZV29 1317 aa32.27■■■□□ 2.76
C9orf47-202ENST00000375850 PCDH11XQ9BZA7 1347 aa32.27■■■□□ 2.76
C9orf47-202ENST00000375850 PCDH11YQ9BZA8 1340 aa32.27■■■□□ 2.76
C9orf47-202ENST00000375850 HSP90AB2PQ58FF8 381 aa32.26■■■□□ 2.75
C9orf47-202ENST00000375850 CCNL1Q9UK58 526 aaPredicted RBP32.26■■■□□ 2.75
C9orf47-202ENST00000375850 SHANK3Q9BYB0 1731 aa32.26■■■□□ 2.75
C9orf47-202ENST00000375850 USHBP1Q8N6Y0 703 aa32.24■■■□□ 2.75
C9orf47-202ENST00000375850 RGPD2P0DJD1 1756 aa32.24■■■□□ 2.75
C9orf47-202ENST00000375850 CLSPNQ9HAW4 1339 aa32.24■■■□□ 2.75
C9orf47-202ENST00000375850 LY75O60449 1722 aa32.23■■■□□ 2.75
C9orf47-202ENST00000375850 KIF20BQ96Q89 1820 aa32.22■■■□□ 2.75
C9orf47-202ENST00000375850 NSD3Q9BZ95 1437 aa32.2■■■□□ 2.75
C9orf47-202ENST00000375850 CARD14Q9BXL6 1004 aa32.2■■■□□ 2.75
C9orf47-202ENST00000375850 KCNQ4P56696 695 aa32.19■■■□□ 2.74
C9orf47-202ENST00000375850 COL24A1Q17RW2 1714 aa32.17■■■□□ 2.74
C9orf47-202ENST00000375850 ZNF784Q8NCA9 323 aaPredicted RBP32.15■■■□□ 2.74
C9orf47-202ENST00000375850 GPR162Q16538 588 aa32.14■■■□□ 2.74
C9orf47-202ENST00000375850 FLAD1Q8NFF5 587 aa32.14■■■□□ 2.74
C9orf47-202ENST00000375850 EMILIN1Q9Y6C2 1016 aa32.14■■■□□ 2.74
C9orf47-202ENST00000375850 NCAPD2Q15021 1401 aa32.13■■■□□ 2.73
C9orf47-202ENST00000375850 SMARCC1Q92922 1105 aaPredicted RBP32.13■■■□□ 2.73
C9orf47-202ENST00000375850 WASHC2AQ641Q2 1341 aa32.12■■■□□ 2.73
C9orf47-202ENST00000375850 CYP27B1O15528 508 aa32.12■■■□□ 2.73
C9orf47-202ENST00000375850 PALLDQ8WX93 1383 aa32.11■■■□□ 2.73
C9orf47-202ENST00000375850 KLHL34Q8N239 644 aa32.11■■■□□ 2.73
C9orf47-202ENST00000375850 SPG7Q9UQ90 795 aa32.11■■■□□ 2.73
C9orf47-202ENST00000375850 MPRIPQ6WCQ1 1025 aa32.1■■■□□ 2.73
C9orf47-202ENST00000375850 MSH5O43196 834 aa32.09■■■□□ 2.73
C9orf47-202ENST00000375850 COL23A1Q86Y22 540 aaPredicted RBP32.09■■■□□ 2.73
C9orf47-202ENST00000375850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.09■■■□□ 2.73
C9orf47-202ENST00000375850 TUBGCP6Q96RT7 1819 aa32.08■■■□□ 2.73
C9orf47-202ENST00000375850 PPM1GO15355 546 aaPredicted RBP32.08■■■□□ 2.73
C9orf47-202ENST00000375850 NKX1-1Q15270 411 aaPredicted RBP32.08■■■□□ 2.73
C9orf47-202ENST00000375850 PLEKHG2Q9H7P9 1386 aa32.07■■■□□ 2.72
C9orf47-202ENST00000375850 CHD4Q14839 1912 aa32.05■■■□□ 2.72
C9orf47-202ENST00000375850 PKD1L3Q7Z443 1732 aa32.05■■■□□ 2.72
C9orf47-202ENST00000375850 ANKRD26Q9UPS8 1709 aa32.05■■■□□ 2.72
C9orf47-202ENST00000375850 UTRNP46939 3433 aa32.04■■■□□ 2.72
C9orf47-202ENST00000375850 C5P01031 1676 aa32.02■■■□□ 2.72
C9orf47-202ENST00000375850 EYA1Q99502 592 aa32.02■■■□□ 2.72
C9orf47-202ENST00000375850 POLKQ9UBT6 870 aa32.01■■■□□ 2.71
C9orf47-202ENST00000375850 GRIN3BO60391 1043 aa32■■■□□ 2.71
C9orf47-202ENST00000375850 PELP1Q8IZL8 1130 aaKnown RBP31.99■■■□□ 2.71
C9orf47-202ENST00000375850 NLGN2Q8NFZ4 835 aa31.99■■■□□ 2.71
C9orf47-202ENST00000375850 PIGBQ92521 554 aa31.99■■■□□ 2.71
C9orf47-202ENST00000375850 AK7Q96M32 723 aa31.99■■■□□ 2.71
C9orf47-202ENST00000375850 IFNL2Q8IZJ0 200 aa31.97■■■□□ 2.71
C9orf47-202ENST00000375850 CD2APQ9Y5K6 639 aa31.97■■■□□ 2.71
C9orf47-202ENST00000375850 EIF4G2P78344 907 aaKnown RBP eCLIP31.96■■■□□ 2.71
C9orf47-202ENST00000375850 TMOD3Q9NYL9 352 aa31.96■■■□□ 2.71
C9orf47-202ENST00000375850 TOGARAM1Q9Y4F4 1720 aa31.95■■■□□ 2.71
C9orf47-202ENST00000375850 PCGF6Q9BYE7 350 aa31.95■■■□□ 2.71
C9orf47-202ENST00000375850 MSL1Q68DK7 614 aa31.94■■■□□ 2.7
C9orf47-202ENST00000375850 POLR3GLQ9BT43 218 aa31.94■■■□□ 2.7
C9orf47-202ENST00000375850 C4BP0C0L5 1744 aa31.93■■■□□ 2.7
C9orf47-202ENST00000375850 LOC102724428A0A0B4J2F2 783 aa31.93■■■□□ 2.7
C9orf47-202ENST00000375850 PHKG2P15735 406 aa31.93■■■□□ 2.7
C9orf47-202ENST00000375850 SIK1P57059 783 aa31.93■■■□□ 2.7
C9orf47-202ENST00000375850 TAF1LQ8IZX4 1826 aa31.92■■■□□ 2.7
C9orf47-202ENST00000375850 SSFA2P28290 1259 aa31.92■■■□□ 2.7
C9orf47-202ENST00000375850 ITGB4P16144 1822 aa31.91■■■□□ 2.7
C9orf47-202ENST00000375850 EIF4A2Q14240 407 aaKnown RBP31.91■■■□□ 2.7
C9orf47-202ENST00000375850 MAP2P11137 1827 aaKnown RBP31.91■■■□□ 2.7
C9orf47-202ENST00000375850 IGSF1Q8N6C5 1336 aa31.87■■■□□ 2.69
C9orf47-202ENST00000375850 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.87■■■□□ 2.69
C9orf47-202ENST00000375850 HSP90AB1P08238 724 aaKnown RBP31.87■■■□□ 2.69
C9orf47-202ENST00000375850 YBX3P16989 372 aaKnown RBP eCLIP31.86■■■□□ 2.69
C9orf47-202ENST00000375850 TNNT2P45379 298 aaPredicted RBP31.86■■■□□ 2.69
C9orf47-202ENST00000375850 C1QTNF8P60827 252 aa31.86■■■□□ 2.69
C9orf47-202ENST00000375850 PANK3Q9H999 370 aa31.85■■■□□ 2.69
C9orf47-202ENST00000375850 HSPA5P11021 654 aaKnown RBP31.84■■■□□ 2.69
C9orf47-202ENST00000375850 ASAP1Q9ULH1 1129 aa31.84■■■□□ 2.69
C9orf47-202ENST00000375850 ERVV-2B6SEH9 535 aa31.83■■■□□ 2.69
C9orf47-202ENST00000375850 PHF14O94880 888 aa31.83■■■□□ 2.69
C9orf47-202ENST00000375850 ATP6V1AP38606 617 aa31.83■■■□□ 2.69
C9orf47-202ENST00000375850 LINC00116Q8NCU8 138 aa31.83■■■□□ 2.69
C9orf47-202ENST00000375850 GIGYF1O75420 1035 aaPredicted RBP31.81■■■□□ 2.68
C9orf47-202ENST00000375850 AMOTQ4VCS5 1084 aa31.81■■■□□ 2.68
C9orf47-202ENST00000375850 PLEKHO1Q53GL0 409 aaPredicted RBP31.81■■■□□ 2.68
C9orf47-202ENST00000375850 DCAF5Q96JK2 942 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms