RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 ZCRB1Q8TBF4 217 aaKnown RBP23.51■■□□□ 1.35
C6orf48-207ENST00000375642 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
C6orf48-207ENST00000375642 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
C6orf48-207ENST00000375642 PARD3Q8TEW0 1356 aa23.51■■□□□ 1.35
C6orf48-207ENST00000375642 OVOS2A0A0G2JMS6 1433 aa23.5■■□□□ 1.35
C6orf48-207ENST00000375642 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
C6orf48-207ENST00000375642 RALBP1Q15311 655 aa23.5■■□□□ 1.35
C6orf48-207ENST00000375642 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
C6orf48-207ENST00000375642 TNS1Q9HBL0 1735 aaKnown RBP23.5■■□□□ 1.35
C6orf48-207ENST00000375642 TRIM37O94972 964 aa23.47■■□□□ 1.35
C6orf48-207ENST00000375642 EZH2Q15910 746 aaKnown RBP23.47■■□□□ 1.35
C6orf48-207ENST00000375642 YY1P25490 414 aa23.46■■□□□ 1.35
C6orf48-207ENST00000375642 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
C6orf48-207ENST00000375642 BCL9O00512 1426 aa23.44■■□□□ 1.34
C6orf48-207ENST00000375642 AEBP1Q8IUX7 1158 aa23.44■■□□□ 1.34
C6orf48-207ENST00000375642 SPG7Q9UQ90 795 aa23.44■■□□□ 1.34
C6orf48-207ENST00000375642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.43■■□□□ 1.34
C6orf48-207ENST00000375642 PCDH11XQ9BZA7 1347 aa23.42■■□□□ 1.34
C6orf48-207ENST00000375642 PCDH11YQ9BZA8 1340 aa23.42■■□□□ 1.34
C6orf48-207ENST00000375642 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
C6orf48-207ENST00000375642 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
C6orf48-207ENST00000375642 APBA3O96018 575 aa23.41■■□□□ 1.34
C6orf48-207ENST00000375642 CAMKK2Q96RR4 588 aa23.41■■□□□ 1.34
C6orf48-207ENST00000375642 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
C6orf48-207ENST00000375642 KDRP35968 1356 aa23.4■■□□□ 1.34
C6orf48-207ENST00000375642 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
C6orf48-207ENST00000375642 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
C6orf48-207ENST00000375642 DCAF8L1A6NGE4 600 aa23.39■■□□□ 1.33
C6orf48-207ENST00000375642 HMOX1P09601 288 aa23.39■■□□□ 1.33
C6orf48-207ENST00000375642 PLEKHO1Q53GL0 409 aaPredicted RBP23.39■■□□□ 1.33
C6orf48-207ENST00000375642 MYBBP1AQ9BQG0 1328 aaKnown RBP23.38■■□□□ 1.33
C6orf48-207ENST00000375642 CYP27B1O15528 508 aa23.38■■□□□ 1.33
C6orf48-207ENST00000375642 NBPF14Q5TI25 921 aa23.38■■□□□ 1.33
C6orf48-207ENST00000375642 ACSBG1Q96GR2 724 aa23.38■■□□□ 1.33
C6orf48-207ENST00000375642 PRKRIP1Q9H875 184 aaPredicted RBP23.38■■□□□ 1.33
C6orf48-207ENST00000375642 AMOTQ4VCS5 1084 aa23.37■■□□□ 1.33
C6orf48-207ENST00000375642 PPP1R1BQ9UD71 204 aaPredicted RBP23.37■■□□□ 1.33
C6orf48-207ENST00000375642 KCNQ2O43526 872 aa23.36■■□□□ 1.33
C6orf48-207ENST00000375642 PTF1AQ7RTS3 328 aa23.35■■□□□ 1.33
C6orf48-207ENST00000375642 IFNL2Q8IZJ0 200 aa23.35■■□□□ 1.33
C6orf48-207ENST00000375642 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
C6orf48-207ENST00000375642 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
C6orf48-207ENST00000375642 RREB1Q92766 1687 aa23.33■■□□□ 1.33
C6orf48-207ENST00000375642 PHKG2P15735 406 aa23.33■■□□□ 1.33
C6orf48-207ENST00000375642 PRIM1P49642 420 aaKnown RBP23.32■■□□□ 1.32
C6orf48-207ENST00000375642 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-207ENST00000375642 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-207ENST00000375642 SYTL4Q96C24 671 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-207ENST00000375642 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
C6orf48-207ENST00000375642 SHANK3Q9BYB0 1731 aa23.32■■□□□ 1.32
C6orf48-207ENST00000375642 SPON1Q9HCB6 807 aa23.31■■□□□ 1.32
C6orf48-207ENST00000375642 NUP188Q5SRE5 1749 aa23.3■■□□□ 1.32
C6orf48-207ENST00000375642 SBF2Q86WG5 1849 aa23.29■■□□□ 1.32
C6orf48-207ENST00000375642 PLSCR1O15162 318 aa23.29■■□□□ 1.32
C6orf48-207ENST00000375642 C1orf141Q5JVX7 400 aa23.29■■□□□ 1.32
C6orf48-207ENST00000375642 FCHSD2O94868 740 aa23.28■■□□□ 1.32
C6orf48-207ENST00000375642 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
C6orf48-207ENST00000375642 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
C6orf48-207ENST00000375642 ANP32CO43423 234 aa23.27■■□□□ 1.32
C6orf48-207ENST00000375642 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
C6orf48-207ENST00000375642 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
C6orf48-207ENST00000375642 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
C6orf48-207ENST00000375642 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
C6orf48-207ENST00000375642 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
C6orf48-207ENST00000375642 AKAP4Q5JQC9 854 aa23.24■■□□□ 1.31
C6orf48-207ENST00000375642 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
C6orf48-207ENST00000375642 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
C6orf48-207ENST00000375642 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
C6orf48-207ENST00000375642 ERVV-2B6SEH9 535 aa23.21■■□□□ 1.31
C6orf48-207ENST00000375642 TMOD3Q9NYL9 352 aa23.21■■□□□ 1.31
C6orf48-207ENST00000375642 DOT1LQ8TEK3 1739 aa23.21■■□□□ 1.31
C6orf48-207ENST00000375642 NEFMP07197 916 aa23.2■■□□□ 1.3
C6orf48-207ENST00000375642 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
C6orf48-207ENST00000375642 TXNRD1Q16881 649 aa23.19■■□□□ 1.3
C6orf48-207ENST00000375642 PIGBQ92521 554 aa23.19■■□□□ 1.3
C6orf48-207ENST00000375642 WDR43Q15061 677 aaKnown RBP eCLIP23.18■■□□□ 1.37e-40■□□□□ 10.9
C6orf48-207ENST00000375642 PROM2Q8N271 834 aa23.18■■□□□ 1.3
C6orf48-207ENST00000375642 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
C6orf48-207ENST00000375642 CABP4P57796 275 aa23.17■■□□□ 1.3
C6orf48-207ENST00000375642 BTAF1O14981 1849 aa23.17■■□□□ 1.3
C6orf48-207ENST00000375642 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
C6orf48-207ENST00000375642 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
C6orf48-207ENST00000375642 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
C6orf48-207ENST00000375642 LGR6Q9HBX8 967 aa23.15■■□□□ 1.3
C6orf48-207ENST00000375642 MAP3K5Q99683 1374 aa23.14■■□□□ 1.3
C6orf48-207ENST00000375642 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.3
C6orf48-207ENST00000375642 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
C6orf48-207ENST00000375642 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
C6orf48-207ENST00000375642 SLC27A3Q5K4L6 730 aa23.13■■□□□ 1.29
C6orf48-207ENST00000375642 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
C6orf48-207ENST00000375642 RGPD3A6NKT7 1758 aaPredicted RBP23.13■■□□□ 1.29
C6orf48-207ENST00000375642 RGPD4Q7Z3J3 1758 aa23.13■■□□□ 1.29
C6orf48-207ENST00000375642 ASAP1Q9ULH1 1129 aa23.11■■□□□ 1.29
C6orf48-207ENST00000375642 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
C6orf48-207ENST00000375642 PALLDQ8WX93 1383 aa23.11■■□□□ 1.29
C6orf48-207ENST00000375642 CCDC184Q52MB2 194 aa23.1■■□□□ 1.29
C6orf48-207ENST00000375642 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
C6orf48-207ENST00000375642 RTF1Q92541 710 aaKnown RBP23.1■■□□□ 1.29
C6orf48-207ENST00000375642 SLC52A2Q9HAB3 445 aa23.1■■□□□ 1.29
C6orf48-207ENST00000375642 ATG3Q9NT62 314 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms