RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZBTB7AO95365 584 aa19.68■□□□□ 0.74
NELFE-201ENST00000375425 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
NELFE-201ENST00000375425 MEGF6O75095 1541 aa19.68■□□□□ 0.74
NELFE-201ENST00000375425 KIF24Q5T7B8 1368 aa19.68■□□□□ 0.74
NELFE-201ENST00000375425 KAT6BQ8WYB5 2073 aa19.68■□□□□ 0.74
NELFE-201ENST00000375425 PPM1GO15355 546 aaPredicted RBP19.68■□□□□ 0.74
NELFE-201ENST00000375425 LRRC4BQ9NT99 713 aa19.68■□□□□ 0.74
NELFE-201ENST00000375425 TATP17735 454 aaPredicted RBP19.67■□□□□ 0.74
NELFE-201ENST00000375425 MYOM1P52179 1685 aa19.66■□□□□ 0.74
NELFE-201ENST00000375425 ATF5Q9Y2D1 282 aaPredicted RBP19.66■□□□□ 0.74
NELFE-201ENST00000375425 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
NELFE-201ENST00000375425 KIF20BQ96Q89 1820 aa19.64■□□□□ 0.73
NELFE-201ENST00000375425 SLC27A3Q5K4L6 730 aa19.64■□□□□ 0.73
NELFE-201ENST00000375425 PANK3Q9H999 370 aa19.63■□□□□ 0.73
NELFE-201ENST00000375425 POLKQ9UBT6 870 aa19.63■□□□□ 0.73
NELFE-201ENST00000375425 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
NELFE-201ENST00000375425 BTAF1O14981 1849 aa19.63■□□□□ 0.73
NELFE-201ENST00000375425 PTGER2P43116 358 aa19.62■□□□□ 0.73
NELFE-201ENST00000375425 ZNF827Q17R98 1081 aa19.62■□□□□ 0.73
NELFE-201ENST00000375425 UTRNP46939 3433 aa19.61■□□□□ 0.73
NELFE-201ENST00000375425 TNNT2P45379 298 aaPredicted RBP19.61■□□□□ 0.73
NELFE-201ENST00000375425 KCNQ4P56696 695 aa19.61■□□□□ 0.73
NELFE-201ENST00000375425 MTFR1LQ9H019 292 aa19.61■□□□□ 0.73
NELFE-201ENST00000375425 NSD2O96028 1365 aa19.61■□□□□ 0.73
NELFE-201ENST00000375425 AKT1S1Q96B36 256 aa19.6■□□□□ 0.73
NELFE-201ENST00000375425 CASZ1Q86V15 1759 aa19.6■□□□□ 0.73
NELFE-201ENST00000375425 PCDH11XQ9BZA7 1347 aa19.6■□□□□ 0.73
NELFE-201ENST00000375425 PCDH11YQ9BZA8 1340 aa19.6■□□□□ 0.73
NELFE-201ENST00000375425 CYP27B1O15528 508 aa19.59■□□□□ 0.73
NELFE-201ENST00000375425 EYA1Q99502 592 aa19.59■□□□□ 0.73
NELFE-201ENST00000375425 CCNL1Q9UK58 526 aaPredicted RBP19.57■□□□□ 0.72
NELFE-201ENST00000375425 SHANK3Q9BYB0 1731 aa19.56■□□□□ 0.72
NELFE-201ENST00000375425 SGIP1Q9BQI5 828 aa19.56■□□□□ 0.72
NELFE-201ENST00000375425 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
NELFE-201ENST00000375425 PAPPAQ13219 1627 aa19.55■□□□□ 0.72
NELFE-201ENST00000375425 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
NELFE-201ENST00000375425 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
NELFE-201ENST00000375425 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
NELFE-201ENST00000375425 DOT1LQ8TEK3 1739 aa19.54■□□□□ 0.72
NELFE-201ENST00000375425 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
NELFE-201ENST00000375425 EIF4A2Q14240 407 aaKnown RBP19.53■□□□□ 0.72
NELFE-201ENST00000375425 PNPLA7Q6ZV29 1317 aa19.53■□□□□ 0.72
NELFE-201ENST00000375425 FHDC1Q9C0D6 1143 aaPredicted RBP19.52■□□□□ 0.72
NELFE-201ENST00000375425 MAP2P11137 1827 aaKnown RBP19.52■□□□□ 0.71
NELFE-201ENST00000375425 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
NELFE-201ENST00000375425 SLC16A10Q8TF71 515 aa19.51■□□□□ 0.71
NELFE-201ENST00000375425 ARXQ96QS3 562 aa19.51■□□□□ 0.71
NELFE-201ENST00000375425 SYT17Q9BSW7 474 aa19.51■□□□□ 0.71
NELFE-201ENST00000375425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.51■□□□□ 0.712e-7■■□□□ 13.6
NELFE-201ENST00000375425 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
NELFE-201ENST00000375425 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
NELFE-201ENST00000375425 PIGBQ92521 554 aa19.5■□□□□ 0.71
NELFE-201ENST00000375425 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
NELFE-201ENST00000375425 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
NELFE-201ENST00000375425 PALLDQ8WX93 1383 aa19.47■□□□□ 0.71
NELFE-201ENST00000375425 PHKG2P15735 406 aa19.47■□□□□ 0.71
NELFE-201ENST00000375425 YY1P25490 414 aa19.47■□□□□ 0.71
NELFE-201ENST00000375425 SMARCC1Q92922 1105 aaPredicted RBP19.47■□□□□ 0.71
NELFE-201ENST00000375425 KIF7Q2M1P5 1343 aa19.47■□□□□ 0.71
NELFE-201ENST00000375425 GOLGB1Q14789 3259 aaKnown RBP19.46■□□□□ 0.71
NELFE-201ENST00000375425 LY75O60449 1722 aa19.46■□□□□ 0.71
NELFE-201ENST00000375425 POLD1P28340 1107 aa19.46■□□□□ 0.71
NELFE-201ENST00000375425 MSH5O43196 834 aa19.45■□□□□ 0.7
NELFE-201ENST00000375425 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
NELFE-201ENST00000375425 COL23A1Q86Y22 540 aaPredicted RBP19.45■□□□□ 0.7
NELFE-201ENST00000375425 IGSF1Q8N6C5 1336 aa19.45■□□□□ 0.7
NELFE-201ENST00000375425 TMOD3Q9NYL9 352 aa19.44■□□□□ 0.7
NELFE-201ENST00000375425 AMER1Q5JTC6 1135 aaPredicted RBP19.43■□□□□ 0.7
NELFE-201ENST00000375425 PKD1L3Q7Z443 1732 aa19.43■□□□□ 0.7
NELFE-201ENST00000375425 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
NELFE-201ENST00000375425 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
NELFE-201ENST00000375425 LOC102724428A0A0B4J2F2 783 aa19.41■□□□□ 0.7
NELFE-201ENST00000375425 SIK1P57059 783 aa19.41■□□□□ 0.7
NELFE-201ENST00000375425 KLHL34Q8N239 644 aa19.41■□□□□ 0.7
NELFE-201ENST00000375425 AEBP1Q8IUX7 1158 aa19.4■□□□□ 0.7
NELFE-201ENST00000375425 FLAD1Q8NFF5 587 aa19.4■□□□□ 0.7
NELFE-201ENST00000375425 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
NELFE-201ENST00000375425 TOGARAM1Q9Y4F4 1720 aa19.4■□□□□ 0.7
NELFE-201ENST00000375425 QSER1Q2KHR3 1735 aa19.39■□□□□ 0.69
NELFE-201ENST00000375425 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
NELFE-201ENST00000375425 IL13P35225 146 aa19.39■□□□□ 0.69
NELFE-201ENST00000375425 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.69
NELFE-201ENST00000375425 AK7Q96M32 723 aa19.39■□□□□ 0.69
NELFE-201ENST00000375425 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
NELFE-201ENST00000375425 SULT6B1Q6IMI4 303 aa19.38■□□□□ 0.69
NELFE-201ENST00000375425 DCAF5Q96JK2 942 aa19.38■□□□□ 0.69
NELFE-201ENST00000375425 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
NELFE-201ENST00000375425 ITGB4P16144 1822 aa19.38■□□□□ 0.69
NELFE-201ENST00000375425 ERVV-2B6SEH9 535 aa19.37■□□□□ 0.69
NELFE-201ENST00000375425 HSP90AB1P08238 724 aaKnown RBP19.37■□□□□ 0.69
NELFE-201ENST00000375425 MSL1Q68DK7 614 aa19.37■□□□□ 0.69
NELFE-201ENST00000375425 ZNF530Q6P9A1 599 aaPredicted RBP19.37■□□□□ 0.69
NELFE-201ENST00000375425 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
NELFE-201ENST00000375425 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
NELFE-201ENST00000375425 MTHFSP49914 203 aa19.36■□□□□ 0.69
NELFE-201ENST00000375425 AMIGO3Q86WK7 504 aa19.36■□□□□ 0.69
NELFE-201ENST00000375425 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
NELFE-201ENST00000375425 CC2D1BQ5T0F9 858 aaKnown RBP19.35■□□□□ 0.69
NELFE-201ENST00000375425 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
NELFE-201ENST00000375425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms