RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NOB1Q9ULX3 412 aaKnown RBP23.04■■□□□ 1.28
HLA-DQB1-201ENST00000374943 KIAA0232Q92628 1395 aa23.04■■□□□ 1.28
HLA-DQB1-201ENST00000374943 NCAPD2Q15021 1401 aa23.03■■□□□ 1.28
HLA-DQB1-201ENST00000374943 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
HLA-DQB1-201ENST00000374943 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
HLA-DQB1-201ENST00000374943 MED1Q15648 1581 aaPredicted RBP23.03■■□□□ 1.28
HLA-DQB1-201ENST00000374943 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
HLA-DQB1-201ENST00000374943 TSPYL6Q8N831 410 aa23.03■■□□□ 1.28
HLA-DQB1-201ENST00000374943 RGPD5Q99666 1765 aa23.02■■□□□ 1.28
HLA-DQB1-201ENST00000374943 MSH6P52701 1360 aa23.02■■□□□ 1.28
HLA-DQB1-201ENST00000374943 GCP02774 474 aa23.02■■□□□ 1.28
HLA-DQB1-201ENST00000374943 MCM10Q7L590 875 aa23.02■■□□□ 1.28
HLA-DQB1-201ENST00000374943 MRPL50Q8N5N7 158 aaKnown RBP23.02■■□□□ 1.28
HLA-DQB1-201ENST00000374943 ARHGAP45Q92619 1136 aa23.02■■□□□ 1.28
HLA-DQB1-201ENST00000374943 XPCQ01831 940 aaPredicted RBP23.01■■□□□ 1.27
HLA-DQB1-201ENST00000374943 ARHGEF25Q86VW2 580 aa23.01■■□□□ 1.27
HLA-DQB1-201ENST00000374943 HAP1P54257 671 aaPredicted RBP23■■□□□ 1.27
HLA-DQB1-201ENST00000374943 LMO7Q8WWI1 1683 aa23■■□□□ 1.27
HLA-DQB1-201ENST00000374943 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
HLA-DQB1-201ENST00000374943 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
HLA-DQB1-201ENST00000374943 RTF1Q92541 710 aaKnown RBP23■■□□□ 1.27
HLA-DQB1-201ENST00000374943 DDX19BQ9UMR2 479 aa23■■□□□ 1.27
HLA-DQB1-201ENST00000374943 ABCC6O95255 1503 aa22.98■■□□□ 1.27
HLA-DQB1-201ENST00000374943 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
HLA-DQB1-201ENST00000374943 IGHDP01880 384 aa22.98■■□□□ 1.27
HLA-DQB1-201ENST00000374943 LTV1Q96GA3 475 aaPredicted RBP22.98■■□□□ 1.27
HLA-DQB1-201ENST00000374943 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
HLA-DQB1-201ENST00000374943 PXDNQ92626 1479 aa22.98■■□□□ 1.27
HLA-DQB1-201ENST00000374943 MAP3K5Q99683 1374 aa22.97■■□□□ 1.27
HLA-DQB1-201ENST00000374943 COL18A1P39060 1754 aa22.96■■□□□ 1.27
HLA-DQB1-201ENST00000374943 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
HLA-DQB1-201ENST00000374943 GNAT3A8MTJ3 354 aa22.96■■□□□ 1.27
HLA-DQB1-201ENST00000374943 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
HLA-DQB1-201ENST00000374943 FAM208AQ9UK61 1670 aaKnown RBP22.96■■□□□ 1.27
HLA-DQB1-201ENST00000374943 TNS3Q68CZ2 1445 aa22.95■■□□□ 1.26
HLA-DQB1-201ENST00000374943 NBPF6Q5VWK0 638 aa22.94■■□□□ 1.26
HLA-DQB1-201ENST00000374943 TMEM57Q8N5G2 664 aa22.94■■□□□ 1.26
HLA-DQB1-201ENST00000374943 NBPF4Q96M43 638 aa22.94■■□□□ 1.26
HLA-DQB1-201ENST00000374943 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
HLA-DQB1-201ENST00000374943 ABCC4O15439 1325 aa22.93■■□□□ 1.26
HLA-DQB1-201ENST00000374943 ELL2O00472 640 aaPredicted RBP22.92■■□□□ 1.26
HLA-DQB1-201ENST00000374943 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
HLA-DQB1-201ENST00000374943 BABAM1Q9NWV8 329 aa22.92■■□□□ 1.26
HLA-DQB1-201ENST00000374943 RWDD1Q9H446 243 aaPredicted RBP22.91■■□□□ 1.26
HLA-DQB1-201ENST00000374943 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
HLA-DQB1-201ENST00000374943 PDE4AP27815 886 aa22.9■■□□□ 1.26
HLA-DQB1-201ENST00000374943 SKAP1Q86WV1 359 aa22.9■■□□□ 1.26
HLA-DQB1-201ENST00000374943 USHBP1Q8N6Y0 703 aa22.9■■□□□ 1.26
HLA-DQB1-201ENST00000374943 BACH2Q9BYV9 841 aa22.9■■□□□ 1.26
HLA-DQB1-201ENST00000374943 API5Q9BZZ5 524 aaKnown RBP22.9■■□□□ 1.26
HLA-DQB1-201ENST00000374943 ZBTB40Q9NUA8 1239 aa22.9■■□□□ 1.26
HLA-DQB1-201ENST00000374943 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.25
HLA-DQB1-201ENST00000374943 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.25
HLA-DQB1-201ENST00000374943 CEMIPQ8WUJ3 1361 aa22.88■■□□□ 1.25
HLA-DQB1-201ENST00000374943 ANKRD24Q8TF21 1146 aa22.88■■□□□ 1.25
HLA-DQB1-201ENST00000374943 ADAMTS7Q9UKP4 1686 aa22.88■■□□□ 1.25
HLA-DQB1-201ENST00000374943 SOS1Q07889 1333 aaPredicted RBP22.88■■□□□ 1.25
HLA-DQB1-201ENST00000374943 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
HLA-DQB1-201ENST00000374943 HDAC1Q13547 482 aaPredicted RBP22.87■■□□□ 1.25
HLA-DQB1-201ENST00000374943 SPATA31A3Q5VYP0 1347 aa22.87■■□□□ 1.25
HLA-DQB1-201ENST00000374943 IL17REQ8NFR9 667 aa22.87■■□□□ 1.25
HLA-DQB1-201ENST00000374943 OVOS2A0A0G2JMS6 1433 aa22.86■■□□□ 1.25
HLA-DQB1-201ENST00000374943 KRT24Q2M2I5 525 aa22.86■■□□□ 1.25
HLA-DQB1-201ENST00000374943 SIPA1L3O60292 1781 aaPredicted RBP22.86■■□□□ 1.25
HLA-DQB1-201ENST00000374943 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
HLA-DQB1-201ENST00000374943 RGS12O14924 1447 aa22.85■■□□□ 1.25
HLA-DQB1-201ENST00000374943 N4BP2Q86UW6 1770 aaPredicted RBP22.85■■□□□ 1.25
HLA-DQB1-201ENST00000374943 ERBB3P21860 1342 aa22.85■■□□□ 1.25
HLA-DQB1-201ENST00000374943 AMOTQ4VCS5 1084 aa22.84■■□□□ 1.25
HLA-DQB1-201ENST00000374943 DDX17Q92841 729 aaKnown RBP22.84■■□□□ 1.25
HLA-DQB1-201ENST00000374943 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
HLA-DQB1-201ENST00000374943 AXIN2Q9Y2T1 843 aa22.84■■□□□ 1.25
HLA-DQB1-201ENST00000374943 PLEKHG2Q9H7P9 1386 aa22.83■■□□□ 1.25
HLA-DQB1-201ENST00000374943 NHSL1Q5SYE7 1610 aa22.83■■□□□ 1.25
HLA-DQB1-201ENST00000374943 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
HLA-DQB1-201ENST00000374943 PTPRCP08575 1304 aa22.83■■□□□ 1.25
HLA-DQB1-201ENST00000374943 TAF7Q15545 349 aaPredicted RBP22.83■■□□□ 1.24
HLA-DQB1-201ENST00000374943 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.24
HLA-DQB1-201ENST00000374943 MIS18AQ9NYP9 233 aa22.83■■□□□ 1.24
HLA-DQB1-201ENST00000374943 ZBTB7BO15156 539 aaPredicted RBP22.82■■□□□ 1.24
HLA-DQB1-201ENST00000374943 CPDO75976 1380 aa22.82■■□□□ 1.24
HLA-DQB1-201ENST00000374943 AKAP4Q5JQC9 854 aa22.81■■□□□ 1.24
HLA-DQB1-201ENST00000374943 RGS3P49796 1198 aa22.81■■□□□ 1.24
HLA-DQB1-201ENST00000374943 ZC3H6P61129 1189 aaKnown RBP22.8■■□□□ 1.24
HLA-DQB1-201ENST00000374943 FAM161AQ3B820 660 aa22.79■■□□□ 1.24
HLA-DQB1-201ENST00000374943 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
HLA-DQB1-201ENST00000374943 SCN11AQ9UI33 1791 aa22.79■■□□□ 1.24
HLA-DQB1-201ENST00000374943 ZNF530Q6P9A1 599 aaPredicted RBP22.78■■□□□ 1.24
HLA-DQB1-201ENST00000374943 PKD1L3Q7Z443 1732 aa22.78■■□□□ 1.24
HLA-DQB1-201ENST00000374943 SOS2Q07890 1332 aaPredicted RBP22.78■■□□□ 1.24
HLA-DQB1-201ENST00000374943 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
HLA-DQB1-201ENST00000374943 HSPA1LP34931 641 aa22.77■■□□□ 1.24
HLA-DQB1-201ENST00000374943 PDZRN3Q9UPQ7 1066 aa22.77■■□□□ 1.24
HLA-DQB1-201ENST00000374943 PIP4K2BP78356 416 aa22.77■■□□□ 1.24
HLA-DQB1-201ENST00000374943 SMC5Q8IY18 1101 aa22.77■■□□□ 1.24
HLA-DQB1-201ENST00000374943 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
HLA-DQB1-201ENST00000374943 TOM1O60784 492 aa22.75■■□□□ 1.23
HLA-DQB1-201ENST00000374943 C8orf34Q49A92 452 aa22.75■■□□□ 1.23
HLA-DQB1-201ENST00000374943 ANP32AP39687 249 aaKnown RBP22.74■■□□□ 1.23
HLA-DQB1-201ENST00000374943 SLC4A2P04920 1241 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms