RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
COL5A2-201ENST00000374866 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
COL5A2-201ENST00000374866 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
COL5A2-201ENST00000374866 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
COL5A2-201ENST00000374866 EIF5P55010 431 aaKnown RBP13.22□□□□□ -0.29
COL5A2-201ENST00000374866 SPTY2D1Q68D10 685 aaPredicted RBP13.22□□□□□ -0.29
COL5A2-201ENST00000374866 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
COL5A2-201ENST00000374866 CCDC178Q5BJE1 867 aa13.22□□□□□ -0.29
COL5A2-201ENST00000374866 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
COL5A2-201ENST00000374866 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
COL5A2-201ENST00000374866 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
COL5A2-201ENST00000374866 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
COL5A2-201ENST00000374866 EZRP15311 586 aaKnown RBP13.21□□□□□ -0.29
COL5A2-201ENST00000374866 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.29
COL5A2-201ENST00000374866 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
COL5A2-201ENST00000374866 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.3
COL5A2-201ENST00000374866 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
COL5A2-201ENST00000374866 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
COL5A2-201ENST00000374866 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
COL5A2-201ENST00000374866 ZNF530Q6P9A1 599 aaPredicted RBP13.2□□□□□ -0.3
COL5A2-201ENST00000374866 FILIP1Q7Z7B0 1213 aa13.2□□□□□ -0.3
COL5A2-201ENST00000374866 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
COL5A2-201ENST00000374866 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
COL5A2-201ENST00000374866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL5A2-201ENST00000374866 DYDC1Q8WWB3 177 aa13.2□□□□□ -0.3
COL5A2-201ENST00000374866 ZBED9Q6R2W3 1325 aa13.19□□□□□ -0.3
COL5A2-201ENST00000374866 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
COL5A2-201ENST00000374866 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
COL5A2-201ENST00000374866 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
COL5A2-201ENST00000374866 VAT1LQ9HCJ6 419 aa13.19□□□□□ -0.3
COL5A2-201ENST00000374866 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
COL5A2-201ENST00000374866 DESP17661 470 aa13.18□□□□□ -0.3
COL5A2-201ENST00000374866 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
COL5A2-201ENST00000374866 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
COL5A2-201ENST00000374866 PRDM10Q9NQV6 1147 aa13.18□□□□□ -0.3
COL5A2-201ENST00000374866 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
COL5A2-201ENST00000374866 LETM1O95202 739 aaPredicted RBP13.18□□□□□ -0.3
COL5A2-201ENST00000374866 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
COL5A2-201ENST00000374866 SPATA32Q96LK8 384 aa13.18□□□□□ -0.3
COL5A2-201ENST00000374866 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
COL5A2-201ENST00000374866 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 CPLX3Q8WVH0 158 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
COL5A2-201ENST00000374866 GNAI3P08754 354 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 MIA2Q96PC5 1412 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
COL5A2-201ENST00000374866 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
COL5A2-201ENST00000374866 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
COL5A2-201ENST00000374866 TMCO5BA8MYB1 307 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 HIP1O00291 1037 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
COL5A2-201ENST00000374866 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 SRGAP3O43295 1099 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 USP8P40818 1118 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 UQCRHP07919 91 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 TAF4BQ92750 862 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 CEP63Q96MT8 703 aa13.16□□□□□ -0.3
COL5A2-201ENST00000374866 ZPR1O75312 459 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 DACH1Q9UI36 760 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
COL5A2-201ENST00000374866 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.31
COL5A2-201ENST00000374866 CFAP70Q5T0N1 1121 aa13.15□□□□□ -0.31
COL5A2-201ENST00000374866 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.31
COL5A2-201ENST00000374866 PRG4Q92954 1404 aaPredicted RBP13.14□□□□□ -0.31
COL5A2-201ENST00000374866 CCP110O43303 1012 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 EPB41L2O43491 1005 aaKnown RBP13.14□□□□□ -0.31
COL5A2-201ENST00000374866 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 ARHGAP5Q13017 1502 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
COL5A2-201ENST00000374866 CABP1Q9NZU7 370 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
COL5A2-201ENST00000374866 FERMT2Q96AC1 680 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 MRE11P49959 708 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
COL5A2-201ENST00000374866 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
COL5A2-201ENST00000374866 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
COL5A2-201ENST00000374866 ARL1P40616 181 aaPredicted RBP13.13□□□□□ -0.31
COL5A2-201ENST00000374866 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
COL5A2-201ENST00000374866 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
COL5A2-201ENST00000374866 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
COL5A2-201ENST00000374866 DZIP1Q86YF9 867 aaKnown RBP13.13□□□□□ -0.31
COL5A2-201ENST00000374866 DPH6Q7L8W6 267 aa13.13□□□□□ -0.31
COL5A2-201ENST00000374866 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms