RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
HMGCL-202ENST00000374487 AAMPQ13685 434 aa15.49■□□□□ 0.07
HMGCL-202ENST00000374487 TRPC5Q9UL62 973 aaPredicted RBP15.49■□□□□ 0.07
HMGCL-202ENST00000374487 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
HMGCL-202ENST00000374487 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
HMGCL-202ENST00000374487 ATRNO75882 1429 aa15.49■□□□□ 0.07
HMGCL-202ENST00000374487 RGS3P49796 1198 aa15.49■□□□□ 0.07
HMGCL-202ENST00000374487 IGHDP01880 384 aa15.48■□□□□ 0.07
HMGCL-202ENST00000374487 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
HMGCL-202ENST00000374487 SLIT3O75094 1523 aa15.48■□□□□ 0.07
HMGCL-202ENST00000374487 HMOX1P09601 288 aa15.48■□□□□ 0.07
HMGCL-202ENST00000374487 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
HMGCL-202ENST00000374487 GJD4Q96KN9 370 aaPredicted RBP15.48■□□□□ 0.07
HMGCL-202ENST00000374487 SMC4Q9NTJ3 1288 aa15.48■□□□□ 0.07
HMGCL-202ENST00000374487 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
HMGCL-202ENST00000374487 RLBP1P12271 317 aa15.47■□□□□ 0.07
HMGCL-202ENST00000374487 RBM6P78332 1123 aaKnown RBP15.47■□□□□ 0.07
HMGCL-202ENST00000374487 FTSJ3Q8IY81 847 aaKnown RBP15.47■□□□□ 0.07
HMGCL-202ENST00000374487 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.07
HMGCL-202ENST00000374487 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
HMGCL-202ENST00000374487 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
HMGCL-202ENST00000374487 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
HMGCL-202ENST00000374487 IL13P35225 146 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
HMGCL-202ENST00000374487 FAM161AQ3B820 660 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 LARP1Q6PKG0 1096 aaKnown RBP15.45■□□□□ 0.06
HMGCL-202ENST00000374487 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 RGS12O14924 1447 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 COL14A1Q05707 1796 aaKnown RBP15.45■□□□□ 0.06
HMGCL-202ENST00000374487 CPDO75976 1380 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 OVOS2A0A0J9YW53 1432 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 GLI3P10071 1580 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 VPS72Q15906 364 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 OVOS2Q6IE36 1432 aa15.45■□□□□ 0.06
HMGCL-202ENST00000374487 DZIP1LQ8IYY4 767 aaKnown RBP15.45■□□□□ 0.06
HMGCL-202ENST00000374487 NFAT5O94916 1531 aa15.44■□□□□ 0.06
HMGCL-202ENST00000374487 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
HMGCL-202ENST00000374487 LAS1LQ9Y4W2 734 aaKnown RBP15.44■□□□□ 0.06
HMGCL-202ENST00000374487 NRAPQ86VF7 1730 aa15.44■□□□□ 0.06
HMGCL-202ENST00000374487 SSH1Q8WYL5 1049 aa15.43■□□□□ 0.06
HMGCL-202ENST00000374487 PHACTR3Q96KR7 559 aa15.43■□□□□ 0.06
HMGCL-202ENST00000374487 CDK12Q9NYV4 1490 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-202ENST00000374487 EVA1CP58658 441 aa15.43■□□□□ 0.06
HMGCL-202ENST00000374487 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
HMGCL-202ENST00000374487 MVPQ14764 893 aaKnown RBP15.43■□□□□ 0.06
HMGCL-202ENST00000374487 FAM98CQ17RN3 349 aaKnown RBP15.43■□□□□ 0.06
HMGCL-202ENST00000374487 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
HMGCL-202ENST00000374487 KCNH5Q8NCM2 988 aa15.42■□□□□ 0.06
HMGCL-202ENST00000374487 LMO7Q8WWI1 1683 aa15.42■□□□□ 0.06
HMGCL-202ENST00000374487 NWD2Q9ULI1 1742 aa15.41■□□□□ 0.06
HMGCL-202ENST00000374487 SOCS7O14512 581 aa15.41■□□□□ 0.06
HMGCL-202ENST00000374487 PCDHB15Q9Y5E8 787 aa15.41■□□□□ 0.06
HMGCL-202ENST00000374487 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
HMGCL-202ENST00000374487 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
HMGCL-202ENST00000374487 TRIM27P14373 513 aa15.4■□□□□ 0.06
HMGCL-202ENST00000374487 ATF7IPQ6VMQ6 1270 aa15.4■□□□□ 0.06
HMGCL-202ENST00000374487 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
HMGCL-202ENST00000374487 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
HMGCL-202ENST00000374487 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
HMGCL-202ENST00000374487 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
HMGCL-202ENST00000374487 COL18A1P39060 1754 aa15.4■□□□□ 0.06
HMGCL-202ENST00000374487 COL5A2P05997 1499 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-202ENST00000374487 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 A0A0G2JS52 829 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 SEPT12Q8IYM1 358 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 RGPD5Q99666 1765 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 LMOD3Q0VAK6 560 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 DDRGK1Q96HY6 314 aa15.39■□□□□ 0.05
HMGCL-202ENST00000374487 SPATA31A1Q5TZJ5 1347 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 KIF16BQ96L93 1317 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 ITPRIPQ8IWB1 547 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
HMGCL-202ENST00000374487 EP400Q96L91 3159 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 GNAI1P63096 354 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 ALDH1L2Q3SY69 923 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 THUMPD2Q9BTF0 503 aaKnown RBP15.38■□□□□ 0.05
HMGCL-202ENST00000374487 DDX19BQ9UMR2 479 aa15.38■□□□□ 0.05
HMGCL-202ENST00000374487 USP54Q70EL1 1684 aa15.37■□□□□ 0.05
HMGCL-202ENST00000374487 ZNF428Q96B54 188 aa15.37■□□□□ 0.05
HMGCL-202ENST00000374487 IFT57Q9NWB7 429 aa15.36■□□□□ 0.05
HMGCL-202ENST00000374487 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
HMGCL-202ENST00000374487 CSB-PGBD3P0DP91 1061 aa15.35■□□□□ 0.05
HMGCL-202ENST00000374487 LTN1O94822 1766 aa15.35■□□□□ 0.05
HMGCL-202ENST00000374487 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
HMGCL-202ENST00000374487 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
HMGCL-202ENST00000374487 AMPHP49418 695 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 SULT6B1Q6IMI4 303 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 HOXC9P31274 260 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 NBR1Q14596 966 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
HMGCL-202ENST00000374487 WDR17Q8IZU2 1322 aa15.33■□□□□ 0.04
HMGCL-202ENST00000374487 IP6K1Q92551 441 aa15.33■□□□□ 0.04
HMGCL-202ENST00000374487 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
HMGCL-202ENST00000374487 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
HMGCL-202ENST00000374487 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
HMGCL-202ENST00000374487 PDZRN3Q9UPQ7 1066 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms