RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
NIPAL3-204ENST00000374399 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 MAP3K5Q99683 1374 aa20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 CHL1O00533 1208 aa20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 C20orf194Q5TEA3 1177 aa20.36■□□□□ 0.85
NIPAL3-204ENST00000374399 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
NIPAL3-204ENST00000374399 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
NIPAL3-204ENST00000374399 MEGF6O75095 1541 aa20.34■□□□□ 0.85
NIPAL3-204ENST00000374399 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
NIPAL3-204ENST00000374399 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
NIPAL3-204ENST00000374399 HAP1P54257 671 aaPredicted RBP20.33■□□□□ 0.85
NIPAL3-204ENST00000374399 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
NIPAL3-204ENST00000374399 WDR17Q8IZU2 1322 aa20.32■□□□□ 0.84
NIPAL3-204ENST00000374399 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
NIPAL3-204ENST00000374399 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
NIPAL3-204ENST00000374399 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
NIPAL3-204ENST00000374399 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
NIPAL3-204ENST00000374399 CSB-PGBD3P0DP91 1061 aa20.31■□□□□ 0.84
NIPAL3-204ENST00000374399 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
NIPAL3-204ENST00000374399 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
NIPAL3-204ENST00000374399 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
NIPAL3-204ENST00000374399 PKD1L3Q7Z443 1732 aa20.31■□□□□ 0.84
NIPAL3-204ENST00000374399 C8orf58Q8NAV2 365 aa20.3■□□□□ 0.84
NIPAL3-204ENST00000374399 COL14A1Q05707 1796 aaKnown RBP20.3■□□□□ 0.84
NIPAL3-204ENST00000374399 VAMP4O75379 141 aa20.3■□□□□ 0.84
NIPAL3-204ENST00000374399 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
NIPAL3-204ENST00000374399 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
NIPAL3-204ENST00000374399 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
NIPAL3-204ENST00000374399 SSH1Q8WYL5 1049 aa20.29■□□□□ 0.84
NIPAL3-204ENST00000374399 LGR6Q9HBX8 967 aa20.29■□□□□ 0.84
NIPAL3-204ENST00000374399 MIS18AQ9NYP9 233 aa20.29■□□□□ 0.84
NIPAL3-204ENST00000374399 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
NIPAL3-204ENST00000374399 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
NIPAL3-204ENST00000374399 CERKQ8TCT0 537 aa20.27■□□□□ 0.84
NIPAL3-204ENST00000374399 CRBNQ96SW2 442 aa20.27■□□□□ 0.84
NIPAL3-204ENST00000374399 KRT24Q2M2I5 525 aa20.27■□□□□ 0.83
NIPAL3-204ENST00000374399 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
NIPAL3-204ENST00000374399 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
NIPAL3-204ENST00000374399 RAPGEF4Q8WZA2 1011 aa20.26■□□□□ 0.83
NIPAL3-204ENST00000374399 SIPA1L3O60292 1781 aaPredicted RBP20.25■□□□□ 0.83
NIPAL3-204ENST00000374399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
NIPAL3-204ENST00000374399 TNNQ9UQP3 1299 aa20.25■□□□□ 0.83
NIPAL3-204ENST00000374399 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
NIPAL3-204ENST00000374399 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 TATP17735 454 aaPredicted RBP20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 OVOS2A0A0G2JMS6 1433 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 KDM3BQ7LBC6 1761 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 TWISTNBQ3B726 338 aaPredicted RBP20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 ALDH1L2Q3SY69 923 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 MPRIPQ6WCQ1 1025 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 TOM1L2Q6ZVM7 507 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 BTG4Q9NY30 223 aa20.24■□□□□ 0.83
NIPAL3-204ENST00000374399 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
NIPAL3-204ENST00000374399 PLCH1Q4KWH8 1693 aa20.23■□□□□ 0.83
NIPAL3-204ENST00000374399 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
NIPAL3-204ENST00000374399 SHANK3Q9BYB0 1731 aa20.23■□□□□ 0.83
NIPAL3-204ENST00000374399 STRN4Q9NRL3 753 aa20.23■□□□□ 0.83
NIPAL3-204ENST00000374399 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
NIPAL3-204ENST00000374399 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 TAF7Q15545 349 aaPredicted RBP20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 KDM6AO15550 1401 aaPredicted RBP20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 B4GALNT3Q6L9W6 998 aa20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
NIPAL3-204ENST00000374399 NRAPQ86VF7 1730 aa20.21■□□□□ 0.83
NIPAL3-204ENST00000374399 CYP27B1O15528 508 aa20.21■□□□□ 0.83
NIPAL3-204ENST00000374399 PHKG2P15735 406 aa20.21■□□□□ 0.83
NIPAL3-204ENST00000374399 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
NIPAL3-204ENST00000374399 RLBP1P12271 317 aa20.2■□□□□ 0.82
NIPAL3-204ENST00000374399 MRPL50Q8N5N7 158 aaKnown RBP20.2■□□□□ 0.82
NIPAL3-204ENST00000374399 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
NIPAL3-204ENST00000374399 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
NIPAL3-204ENST00000374399 EVA1CP58658 441 aa20.19■□□□□ 0.82
NIPAL3-204ENST00000374399 NOB1Q9ULX3 412 aaKnown RBP20.18■□□□□ 0.82
NIPAL3-204ENST00000374399 ADAMTS2O95450 1211 aa20.17■□□□□ 0.82
NIPAL3-204ENST00000374399 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 TRIM27P14373 513 aa20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 KCNQ3O43525 872 aa20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 IL2RBP14784 551 aa20.16■□□□□ 0.82
NIPAL3-204ENST00000374399 MRC1P22897 1456 aa20.15■□□□□ 0.82
NIPAL3-204ENST00000374399 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
NIPAL3-204ENST00000374399 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
NIPAL3-204ENST00000374399 JCADQ9P266 1359 aa20.14■□□□□ 0.82
NIPAL3-204ENST00000374399 KIF16BQ96L93 1317 aa20.14■□□□□ 0.82
NIPAL3-204ENST00000374399 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
NIPAL3-204ENST00000374399 COG6Q9Y2V7 657 aa20.14■□□□□ 0.81
NIPAL3-204ENST00000374399 SLIT2O94813 1529 aa20.14■□□□□ 0.81
NIPAL3-204ENST00000374399 NWD2Q9ULI1 1742 aa20.14■□□□□ 0.81
NIPAL3-204ENST00000374399 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
NIPAL3-204ENST00000374399 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms