RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 BRINP3Q76B58 766 aa21.66■■□□□ 1.06
PTPN20-203ENST00000374342 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
PTPN20-203ENST00000374342 KDM2BQ8NHM5 1336 aa21.66■■□□□ 1.06
PTPN20-203ENST00000374342 VIRMAQ69YN4 1812 aaKnown RBP21.66■■□□□ 1.06
PTPN20-203ENST00000374342 MAP3K5Q99683 1374 aa21.66■■□□□ 1.06
PTPN20-203ENST00000374342 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
PTPN20-203ENST00000374342 TWISTNBQ3B726 338 aaPredicted RBP21.65■■□□□ 1.06
PTPN20-203ENST00000374342 LMO7Q8WWI1 1683 aa21.65■■□□□ 1.06
PTPN20-203ENST00000374342 COL18A1P39060 1754 aa21.65■■□□□ 1.06
PTPN20-203ENST00000374342 VAMP4O75379 141 aa21.65■■□□□ 1.06
PTPN20-203ENST00000374342 MS4A1P11836 297 aa21.65■■□□□ 1.06
PTPN20-203ENST00000374342 TRIM27P14373 513 aa21.65■■□□□ 1.06
PTPN20-203ENST00000374342 DZIP1LQ8IYY4 767 aaKnown RBP21.65■■□□□ 1.06
PTPN20-203ENST00000374342 C8orf58Q8NAV2 365 aa21.65■■□□□ 1.06
PTPN20-203ENST00000374342 NOB1Q9ULX3 412 aaKnown RBP21.65■■□□□ 1.06
PTPN20-203ENST00000374342 ANKRD24Q8TF21 1146 aa21.64■■□□□ 1.05
PTPN20-203ENST00000374342 NCAPD2Q15021 1401 aa21.64■■□□□ 1.05
PTPN20-203ENST00000374342 CHL1O00533 1208 aa21.63■■□□□ 1.05
PTPN20-203ENST00000374342 ZC3H6P61129 1189 aaKnown RBP21.63■■□□□ 1.05
PTPN20-203ENST00000374342 ATF7IPQ6VMQ6 1270 aa21.63■■□□□ 1.05
PTPN20-203ENST00000374342 CENPQQ7L2Z9 268 aaPredicted RBP21.63■■□□□ 1.05
PTPN20-203ENST00000374342 SPATA31A3Q5VYP0 1347 aa21.63■■□□□ 1.05
PTPN20-203ENST00000374342 FAM208AQ9UK61 1670 aaKnown RBP21.63■■□□□ 1.05
PTPN20-203ENST00000374342 GNAT3A8MTJ3 354 aa21.63■■□□□ 1.05
PTPN20-203ENST00000374342 MVPQ14764 893 aaKnown RBP21.62■■□□□ 1.05
PTPN20-203ENST00000374342 NHSL1Q5SYE7 1610 aa21.62■■□□□ 1.05
PTPN20-203ENST00000374342 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
PTPN20-203ENST00000374342 ABCC6O95255 1503 aa21.61■■□□□ 1.05
PTPN20-203ENST00000374342 HTATSF1O43719 755 aaKnown RBP21.61■■□□□ 1.05
PTPN20-203ENST00000374342 AXIN2Q9Y2T1 843 aa21.61■■□□□ 1.05
PTPN20-203ENST00000374342 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
PTPN20-203ENST00000374342 MRPL50Q8N5N7 158 aaKnown RBP21.6■■□□□ 1.05
PTPN20-203ENST00000374342 CABLES1Q8TDN4 633 aa21.6■■□□□ 1.05
PTPN20-203ENST00000374342 SLAIN2Q9P270 581 aa21.6■■□□□ 1.05
PTPN20-203ENST00000374342 TCERG1O14776 1098 aaKnown RBP21.59■■□□□ 1.05
PTPN20-203ENST00000374342 KIAA0232Q92628 1395 aa21.59■■□□□ 1.05
PTPN20-203ENST00000374342 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
PTPN20-203ENST00000374342 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
PTPN20-203ENST00000374342 TSPYL4Q9UJ04 414 aa21.59■■□□□ 1.05
PTPN20-203ENST00000374342 ERBB3P21860 1342 aa21.58■■□□□ 1.05
PTPN20-203ENST00000374342 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.04
PTPN20-203ENST00000374342 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.04
PTPN20-203ENST00000374342 AAMPQ13685 434 aa21.57■■□□□ 1.04
PTPN20-203ENST00000374342 ITPRIPQ8IWB1 547 aa21.57■■□□□ 1.04
PTPN20-203ENST00000374342 SKAP1Q86WV1 359 aa21.55■■□□□ 1.04
PTPN20-203ENST00000374342 TMEM57Q8N5G2 664 aa21.55■■□□□ 1.04
PTPN20-203ENST00000374342 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
PTPN20-203ENST00000374342 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
PTPN20-203ENST00000374342 DDX19BQ9UMR2 479 aa21.54■■□□□ 1.04
PTPN20-203ENST00000374342 SOS2Q07890 1332 aaPredicted RBP21.54■■□□□ 1.04
PTPN20-203ENST00000374342 ZNF530Q6P9A1 599 aaPredicted RBP21.53■■□□□ 1.04
PTPN20-203ENST00000374342 IL17REQ8NFR9 667 aa21.53■■□□□ 1.04
PTPN20-203ENST00000374342 PLEKHO1Q53GL0 409 aaPredicted RBP21.53■■□□□ 1.04
PTPN20-203ENST00000374342 CPDO75976 1380 aa21.52■■□□□ 1.04
PTPN20-203ENST00000374342 IGHDP01880 384 aa21.52■■□□□ 1.04
PTPN20-203ENST00000374342 CHRNA2Q15822 529 aa21.52■■□□□ 1.04
PTPN20-203ENST00000374342 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
PTPN20-203ENST00000374342 PCDHB15Q9Y5E8 787 aa21.51■■□□□ 1.03
PTPN20-203ENST00000374342 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
PTPN20-203ENST00000374342 AMOTQ4VCS5 1084 aa21.5■■□□□ 1.03
PTPN20-203ENST00000374342 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
PTPN20-203ENST00000374342 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
PTPN20-203ENST00000374342 AKAP4Q5JQC9 854 aa21.49■■□□□ 1.03
PTPN20-203ENST00000374342 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
PTPN20-203ENST00000374342 ABCC4O15439 1325 aa21.48■■□□□ 1.03
PTPN20-203ENST00000374342 ROBO1Q9Y6N7 1651 aa21.48■■□□□ 1.03
PTPN20-203ENST00000374342 TAF7Q15545 349 aaPredicted RBP21.48■■□□□ 1.03
PTPN20-203ENST00000374342 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
PTPN20-203ENST00000374342 API5Q9BZZ5 524 aaKnown RBP21.47■■□□□ 1.03
PTPN20-203ENST00000374342 ADAMTS7Q9UKP4 1686 aa21.47■■□□□ 1.03
PTPN20-203ENST00000374342 MEGF6O75095 1541 aa21.47■■□□□ 1.03
PTPN20-203ENST00000374342 PKD1L3Q7Z443 1732 aa21.47■■□□□ 1.03
PTPN20-203ENST00000374342 LGR6Q9HBX8 967 aa21.46■■□□□ 1.03
PTPN20-203ENST00000374342 OVOS2A0A0G2JMS6 1433 aa21.46■■□□□ 1.03
PTPN20-203ENST00000374342 SCN11AQ9UI33 1791 aa21.46■■□□□ 1.03
PTPN20-203ENST00000374342 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
PTPN20-203ENST00000374342 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
PTPN20-203ENST00000374342 RGS12O14924 1447 aa21.45■■□□□ 1.02
PTPN20-203ENST00000374342 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
PTPN20-203ENST00000374342 RAPGEF4Q8WZA2 1011 aa21.45■■□□□ 1.02
PTPN20-203ENST00000374342 PARP4Q9UKK3 1724 aaKnown RBP21.44■■□□□ 1.02
PTPN20-203ENST00000374342 PRDM11Q9NQV5 511 aa21.44■■□□□ 1.02
PTPN20-203ENST00000374342 RWDD1Q9H446 243 aaPredicted RBP21.43■■□□□ 1.02
PTPN20-203ENST00000374342 ZBTB40Q9NUA8 1239 aa21.43■■□□□ 1.02
PTPN20-203ENST00000374342 LTBP4Q8N2S1 1624 aa21.43■■□□□ 1.02
PTPN20-203ENST00000374342 TEFQ10587 303 aa21.43■■□□□ 1.02
PTPN20-203ENST00000374342 RGS3P49796 1198 aa21.42■■□□□ 1.02
PTPN20-203ENST00000374342 RNMTO43148 476 aaKnown RBP21.41■■□□□ 1.02
PTPN20-203ENST00000374342 TATP17735 454 aaPredicted RBP21.41■■□□□ 1.02
PTPN20-203ENST00000374342 PTPRCP08575 1304 aa21.41■■□□□ 1.02
PTPN20-203ENST00000374342 COL5A2P05997 1499 aaPredicted RBP21.4■■□□□ 1.02
PTPN20-203ENST00000374342 SLC4A2P04920 1241 aa21.4■■□□□ 1.02
PTPN20-203ENST00000374342 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
PTPN20-203ENST00000374342 N4BP2Q86UW6 1770 aaPredicted RBP21.4■■□□□ 1.02
PTPN20-203ENST00000374342 STK31Q9BXU1 1019 aa21.39■■□□□ 1.02
PTPN20-203ENST00000374342 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
PTPN20-203ENST00000374342 CHMP4BQ9H444 224 aaKnown RBP21.39■■□□□ 1.01
PTPN20-203ENST00000374342 NECTIN2Q92692 538 aa21.38■■□□□ 1.01
PTPN20-203ENST00000374342 CCDC30Q5VVM6 783 aa21.37■■□□□ 1.01
PTPN20-203ENST00000374342 PLEKHG2Q9H7P9 1386 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms