RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 NWD2Q9ULI1 1742 aa12.01□□□□□ -0.49
PTPN20-201ENST00000374218 RIPK4P57078 832 aa12.01□□□□□ -0.49
PTPN20-201ENST00000374218 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
PTPN20-201ENST00000374218 C1orf141Q5JVX7 400 aa12.01□□□□□ -0.49
PTPN20-201ENST00000374218 BARGINQ6ZT62 677 aa12.01□□□□□ -0.49
PTPN20-201ENST00000374218 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
PTPN20-201ENST00000374218 PHF23Q9BUL5 403 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-201ENST00000374218 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
PTPN20-201ENST00000374218 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
PTPN20-201ENST00000374218 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
PTPN20-201ENST00000374218 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
PTPN20-201ENST00000374218 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
PTPN20-201ENST00000374218 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
PTPN20-201ENST00000374218 PLCH1Q4KWH8 1693 aa11.99□□□□□ -0.49
PTPN20-201ENST00000374218 EXOC5O00471 708 aa11.99□□□□□ -0.49
PTPN20-201ENST00000374218 CALD1Q05682 793 aaKnown RBP11.99□□□□□ -0.49
PTPN20-201ENST00000374218 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
PTPN20-201ENST00000374218 ZNF530Q6P9A1 599 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-201ENST00000374218 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
PTPN20-201ENST00000374218 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
PTPN20-201ENST00000374218 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
PTPN20-201ENST00000374218 RGPD5Q99666 1765 aa11.99□□□□□ -0.49
PTPN20-201ENST00000374218 A0A0G2JS52 829 aa11.98□□□□□ -0.49
PTPN20-201ENST00000374218 HSP90AB1P08238 724 aaKnown RBP11.98□□□□□ -0.49
PTPN20-201ENST00000374218 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
PTPN20-201ENST00000374218 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
PTPN20-201ENST00000374218 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
PTPN20-201ENST00000374218 IFNL2Q8IZJ0 200 aa11.97□□□□□ -0.49
PTPN20-201ENST00000374218 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
PTPN20-201ENST00000374218 PCDH11XQ9BZA7 1347 aa11.97□□□□□ -0.49
PTPN20-201ENST00000374218 PCDH11YQ9BZA8 1340 aa11.97□□□□□ -0.49
PTPN20-201ENST00000374218 DDB1Q16531 1140 aa11.97□□□□□ -0.49
PTPN20-201ENST00000374218 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
PTPN20-201ENST00000374218 ATRNO75882 1429 aa11.96□□□□□ -0.49
PTPN20-201ENST00000374218 MEGF6O75095 1541 aa11.96□□□□□ -0.49
PTPN20-201ENST00000374218 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
PTPN20-201ENST00000374218 SENP3-EIF4A1A0A087X0R7 540 aa11.96□□□□□ -0.5
PTPN20-201ENST00000374218 WWC1Q8IX03 1113 aa11.96□□□□□ -0.5
PTPN20-201ENST00000374218 NRAPQ86VF7 1730 aa11.95□□□□□ -0.5
PTPN20-201ENST00000374218 MAP3K5Q99683 1374 aa11.95□□□□□ -0.5
PTPN20-201ENST00000374218 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
PTPN20-201ENST00000374218 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
PTPN20-201ENST00000374218 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
PTPN20-201ENST00000374218 PHKG2P15735 406 aa11.94□□□□□ -0.5
PTPN20-201ENST00000374218 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
PTPN20-201ENST00000374218 DISP2A7MBM2 1401 aa11.94□□□□□ -0.5
PTPN20-201ENST00000374218 DCAF5Q96JK2 942 aa11.94□□□□□ -0.5
PTPN20-201ENST00000374218 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
PTPN20-201ENST00000374218 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
PTPN20-201ENST00000374218 ONECUT3O60422 494 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-201ENST00000374218 RXRBP28702 533 aa11.93□□□□□ -0.5
PTPN20-201ENST00000374218 TEFQ10587 303 aa11.93□□□□□ -0.5
PTPN20-201ENST00000374218 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
PTPN20-201ENST00000374218 CYP27B1O15528 508 aa11.92□□□□□ -0.5
PTPN20-201ENST00000374218 IL16Q14005 1332 aa11.92□□□□□ -0.5
PTPN20-201ENST00000374218 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
PTPN20-201ENST00000374218 MCM10Q7L590 875 aa11.92□□□□□ -0.5
PTPN20-201ENST00000374218 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
PTPN20-201ENST00000374218 E9PSI1 815 aa11.91□□□□□ -0.5
PTPN20-201ENST00000374218 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-201ENST00000374218 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
PTPN20-201ENST00000374218 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
PTPN20-201ENST00000374218 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
PTPN20-201ENST00000374218 GNAI1P63096 354 aa11.91□□□□□ -0.5
PTPN20-201ENST00000374218 ZNF521Q96K83 1311 aa11.91□□□□□ -0.5
PTPN20-201ENST00000374218 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
PTPN20-201ENST00000374218 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-201ENST00000374218 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
PTPN20-201ENST00000374218 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
PTPN20-201ENST00000374218 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
PTPN20-201ENST00000374218 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
PTPN20-201ENST00000374218 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
PTPN20-201ENST00000374218 CABP4P57796 275 aa11.89□□□□□ -0.51
PTPN20-201ENST00000374218 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-201ENST00000374218 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
PTPN20-201ENST00000374218 BABAM1Q9NWV8 329 aa11.89□□□□□ -0.51
PTPN20-201ENST00000374218 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
PTPN20-201ENST00000374218 LGR6Q9HBX8 967 aa11.89□□□□□ -0.51
PTPN20-201ENST00000374218 RGS17Q9UGC6 210 aaPredicted RBP11.88□□□□□ -0.51
PTPN20-201ENST00000374218 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
PTPN20-201ENST00000374218 SLFN5Q08AF3 891 aa11.87□□□□□ -0.51
PTPN20-201ENST00000374218 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-201ENST00000374218 GLI3P10071 1580 aa11.87□□□□□ -0.51
PTPN20-201ENST00000374218 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
PTPN20-201ENST00000374218 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
PTPN20-201ENST00000374218 CHL1O00533 1208 aa11.85□□□□□ -0.51
PTPN20-201ENST00000374218 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
PTPN20-201ENST00000374218 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
PTPN20-201ENST00000374218 GTF3C3Q9Y5Q9 886 aa11.85□□□□□ -0.51
PTPN20-201ENST00000374218 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
PTPN20-201ENST00000374218 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
PTPN20-201ENST00000374218 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
PTPN20-201ENST00000374218 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-201ENST00000374218 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms