RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 CCDC27Q2M243 656 aa19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 MTHFSDQ2M296 383 aaKnown RBP19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 AMOTQ4VCS5 1084 aa19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 THRAP3Q9Y2W1 955 aaKnown RBP19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 RRP7AQ9Y3A4 280 aaKnown RBP19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 DISP2A7MBM2 1401 aa19.27■□□□□ 0.68
SMPDL3B-201ENST00000373888 IL2RBP14784 551 aa19.26■□□□□ 0.67
SMPDL3B-201ENST00000373888 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
SMPDL3B-201ENST00000373888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMPDL3B-201ENST00000373888 USP35Q9P2H5 1018 aa19.26■□□□□ 0.67
SMPDL3B-201ENST00000373888 PKD1L3Q7Z443 1732 aa19.26■□□□□ 0.67
SMPDL3B-201ENST00000373888 WNK3Q9BYP7 1800 aa19.26■□□□□ 0.67
SMPDL3B-201ENST00000373888 RIPK4P57078 832 aa19.25■□□□□ 0.67
SMPDL3B-201ENST00000373888 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
SMPDL3B-201ENST00000373888 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
SMPDL3B-201ENST00000373888 ATRNO75882 1429 aa19.25■□□□□ 0.67
SMPDL3B-201ENST00000373888 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
SMPDL3B-201ENST00000373888 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
SMPDL3B-201ENST00000373888 BARGINQ6ZT62 677 aa19.23■□□□□ 0.67
SMPDL3B-201ENST00000373888 TRIM35Q9UPQ4 493 aa19.23■□□□□ 0.67
SMPDL3B-201ENST00000373888 CCDC9Q9Y3X0 531 aaKnown RBP19.23■□□□□ 0.67
SMPDL3B-201ENST00000373888 DLG5Q8TDM6 1919 aa19.23■□□□□ 0.67
SMPDL3B-201ENST00000373888 LMOD3Q0VAK6 560 aa19.22■□□□□ 0.67
SMPDL3B-201ENST00000373888 WWC1Q8IX03 1113 aa19.22■□□□□ 0.67
SMPDL3B-201ENST00000373888 CDCA7Q9BWT1 371 aaPredicted RBP19.22■□□□□ 0.67
SMPDL3B-201ENST00000373888 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
SMPDL3B-201ENST00000373888 TRPC5Q9UL62 973 aaPredicted RBP19.21■□□□□ 0.67
SMPDL3B-201ENST00000373888 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
SMPDL3B-201ENST00000373888 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
SMPDL3B-201ENST00000373888 HTATSF1O43719 755 aaKnown RBP19.2■□□□□ 0.66
SMPDL3B-201ENST00000373888 AKAP4Q5JQC9 854 aa19.2■□□□□ 0.66
SMPDL3B-201ENST00000373888 ZCRB1Q8TBF4 217 aaKnown RBP19.2■□□□□ 0.66
SMPDL3B-201ENST00000373888 GLI3P10071 1580 aa19.19■□□□□ 0.66
SMPDL3B-201ENST00000373888 GNAT3A8MTJ3 354 aa19.19■□□□□ 0.66
SMPDL3B-201ENST00000373888 GJD4Q96KN9 370 aaPredicted RBP19.19■□□□□ 0.66
SMPDL3B-201ENST00000373888 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
SMPDL3B-201ENST00000373888 PCDH11XQ9BZA7 1347 aa19.18■□□□□ 0.66
SMPDL3B-201ENST00000373888 PCDH11YQ9BZA8 1340 aa19.18■□□□□ 0.66
SMPDL3B-201ENST00000373888 ZNF772Q68DY9 489 aaPredicted RBP19.18■□□□□ 0.66
SMPDL3B-201ENST00000373888 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
SMPDL3B-201ENST00000373888 PDE3BQ13370 1112 aa19.17■□□□□ 0.66
SMPDL3B-201ENST00000373888 C1orf141Q5JVX7 400 aa19.17■□□□□ 0.66
SMPDL3B-201ENST00000373888 WDR63Q8IWG1 891 aa19.17■□□□□ 0.66
SMPDL3B-201ENST00000373888 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
SMPDL3B-201ENST00000373888 CYP27B1O15528 508 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 PHKG2P15735 406 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 LRRC37A3O60309 1634 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 ADAMTS7Q9UKP4 1686 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 THSD7AQ9UPZ6 1657 aa19.16■□□□□ 0.66
SMPDL3B-201ENST00000373888 GOLGA2Q08379 1002 aa19.15■□□□□ 0.66
SMPDL3B-201ENST00000373888 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
SMPDL3B-201ENST00000373888 ILDR1Q86SU0 546 aaPredicted RBP19.15■□□□□ 0.66
SMPDL3B-201ENST00000373888 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
SMPDL3B-201ENST00000373888 CEMIPQ8WUJ3 1361 aa19.14■□□□□ 0.65
SMPDL3B-201ENST00000373888 IL16Q14005 1332 aa19.14■□□□□ 0.65
SMPDL3B-201ENST00000373888 EXOC5O00471 708 aa19.14■□□□□ 0.65
SMPDL3B-201ENST00000373888 CALD1Q05682 793 aaKnown RBP19.14■□□□□ 0.65
SMPDL3B-201ENST00000373888 DCTN1Q14203 1278 aa19.14■□□□□ 0.65
SMPDL3B-201ENST00000373888 MCM10Q7L590 875 aa19.14■□□□□ 0.65
SMPDL3B-201ENST00000373888 ONECUT3O60422 494 aaPredicted RBP19.13■□□□□ 0.65
SMPDL3B-201ENST00000373888 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
SMPDL3B-201ENST00000373888 DDB1Q16531 1140 aa19.13■□□□□ 0.65
SMPDL3B-201ENST00000373888 IL17REQ8NFR9 667 aa19.13■□□□□ 0.65
SMPDL3B-201ENST00000373888 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
SMPDL3B-201ENST00000373888 NKX1-1Q15270 411 aaPredicted RBP19.12■□□□□ 0.65
SMPDL3B-201ENST00000373888 KDM6AO15550 1401 aaPredicted RBP19.11■□□□□ 0.65
SMPDL3B-201ENST00000373888 E9PSI1 815 aa19.11■□□□□ 0.65
SMPDL3B-201ENST00000373888 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
SMPDL3B-201ENST00000373888 MPRIPQ6WCQ1 1025 aa19.11■□□□□ 0.65
SMPDL3B-201ENST00000373888 CDCA7LQ96GN5 454 aa19.11■□□□□ 0.65
SMPDL3B-201ENST00000373888 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
SMPDL3B-201ENST00000373888 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
SMPDL3B-201ENST00000373888 DCAF5Q96JK2 942 aa19.1■□□□□ 0.65
SMPDL3B-201ENST00000373888 LGR6Q9HBX8 967 aa19.1■□□□□ 0.65
SMPDL3B-201ENST00000373888 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
SMPDL3B-201ENST00000373888 SCN11AQ9UI33 1791 aa19.1■□□□□ 0.65
SMPDL3B-201ENST00000373888 RBM6P78332 1123 aaKnown RBP19.09■□□□□ 0.65
SMPDL3B-201ENST00000373888 TRMT2AQ8IZ69 625 aaKnown RBP19.09■□□□□ 0.65
SMPDL3B-201ENST00000373888 IFT57Q9NWB7 429 aa19.09■□□□□ 0.65
SMPDL3B-201ENST00000373888 RGS17Q9UGC6 210 aaPredicted RBP19.09■□□□□ 0.65
SMPDL3B-201ENST00000373888 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.65
SMPDL3B-201ENST00000373888 MRC1P22897 1456 aa19.08■□□□□ 0.64
SMPDL3B-201ENST00000373888 ZNF853P0CG23 659 aa19.08■□□□□ 0.64
SMPDL3B-201ENST00000373888 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
SMPDL3B-201ENST00000373888 GNAI1P63096 354 aa19.07■□□□□ 0.64
SMPDL3B-201ENST00000373888 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
SMPDL3B-201ENST00000373888 DUSP27Q5VZP5 1158 aa19.06■□□□□ 0.64
SMPDL3B-201ENST00000373888 A0A0G2JS52 829 aa19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 SEPT12Q8IYM1 358 aa19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 MARCH10Q8NA82 808 aaPredicted RBP19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 SIPA1L3O60292 1781 aaPredicted RBP19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 CHL1O00533 1208 aa19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 TEFQ10587 303 aa19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 BABAM1Q9NWV8 329 aa19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
SMPDL3B-201ENST00000373888 FANCIQ9NVI1 1328 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms