RNA–Protein interactions for RNA: ENST00000373619.7

CITED1-202, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CITED1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-202ENST00000373619 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
CITED1-202ENST00000373619 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
CITED1-202ENST00000373619 SLC16A10Q8TF71 515 aa19.57■□□□□ 0.72
CITED1-202ENST00000373619 POLD1P28340 1107 aa19.56■□□□□ 0.72
CITED1-202ENST00000373619 RAPGEF4Q8WZA2 1011 aa19.56■□□□□ 0.72
CITED1-202ENST00000373619 SYT17Q9BSW7 474 aa19.56■□□□□ 0.72
CITED1-202ENST00000373619 USP47Q96K76 1375 aa19.56■□□□□ 0.72
CITED1-202ENST00000373619 TFCP2L1Q9NZI6 479 aa19.54■□□□□ 0.72
CITED1-202ENST00000373619 LY75O60449 1722 aa19.54■□□□□ 0.72
CITED1-202ENST00000373619 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
CITED1-202ENST00000373619 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
CITED1-202ENST00000373619 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
CITED1-202ENST00000373619 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
CITED1-202ENST00000373619 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
CITED1-202ENST00000373619 LRRC4BQ9NT99 713 aa19.52■□□□□ 0.72
CITED1-202ENST00000373619 FYB1O15117 783 aa19.51■□□□□ 0.71
CITED1-202ENST00000373619 RRS1Q15050 365 aaKnown RBP19.51■□□□□ 0.71
CITED1-202ENST00000373619 AKT1S1Q96B36 256 aa19.51■□□□□ 0.71
CITED1-202ENST00000373619 SGIP1Q9BQI5 828 aa19.51■□□□□ 0.71
CITED1-202ENST00000373619 KIF24Q5T7B8 1368 aa19.51■□□□□ 0.71
CITED1-202ENST00000373619 MAP3K5Q99683 1374 aa19.51■□□□□ 0.71
CITED1-202ENST00000373619 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
CITED1-202ENST00000373619 CCNL1Q9UK58 526 aaPredicted RBP19.5■□□□□ 0.71
CITED1-202ENST00000373619 FLT4P35916 1363 aa19.49■□□□□ 0.71
CITED1-202ENST00000373619 MEGF6O75095 1541 aa19.49■□□□□ 0.71
CITED1-202ENST00000373619 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
CITED1-202ENST00000373619 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
CITED1-202ENST00000373619 TUBGCP6Q96RT7 1819 aa19.48■□□□□ 0.71
CITED1-202ENST00000373619 FBLN1P23142 703 aa19.48■□□□□ 0.71
CITED1-202ENST00000373619 GPR162Q16538 588 aa19.48■□□□□ 0.71
CITED1-202ENST00000373619 NBPF6Q5VWK0 638 aa19.48■□□□□ 0.71
CITED1-202ENST00000373619 NBPF4Q96M43 638 aa19.48■□□□□ 0.71
CITED1-202ENST00000373619 INSRP06213 1382 aa19.47■□□□□ 0.71
CITED1-202ENST00000373619 MSH5O43196 834 aa19.47■□□□□ 0.71
CITED1-202ENST00000373619 PNPLA7Q6ZV29 1317 aa19.46■□□□□ 0.71
CITED1-202ENST00000373619 COL24A1Q17RW2 1714 aa19.45■□□□□ 0.7
CITED1-202ENST00000373619 USHBP1Q8N6Y0 703 aa19.45■□□□□ 0.7
CITED1-202ENST00000373619 C5P01031 1676 aa19.43■□□□□ 0.7
CITED1-202ENST00000373619 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
CITED1-202ENST00000373619 NSD2O96028 1365 aa19.43■□□□□ 0.7
CITED1-202ENST00000373619 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
CITED1-202ENST00000373619 KCNQ4P56696 695 aa19.42■□□□□ 0.7
CITED1-202ENST00000373619 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
CITED1-202ENST00000373619 ZNF784Q8NCA9 323 aaPredicted RBP19.42■□□□□ 0.7
CITED1-202ENST00000373619 FLAD1Q8NFF5 587 aa19.42■□□□□ 0.7
CITED1-202ENST00000373619 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
CITED1-202ENST00000373619 PPM1GO15355 546 aaPredicted RBP19.41■□□□□ 0.7
CITED1-202ENST00000373619 SMARCC1Q92922 1105 aaPredicted RBP19.41■□□□□ 0.7
CITED1-202ENST00000373619 ITGB4P16144 1822 aa19.41■□□□□ 0.7
CITED1-202ENST00000373619 TAF1LQ8IZX4 1826 aa19.4■□□□□ 0.7
CITED1-202ENST00000373619 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
CITED1-202ENST00000373619 PKD1L3Q7Z443 1732 aa19.39■□□□□ 0.7
CITED1-202ENST00000373619 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
CITED1-202ENST00000373619 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
CITED1-202ENST00000373619 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
CITED1-202ENST00000373619 GRIN3BO60391 1043 aa19.36■□□□□ 0.69
CITED1-202ENST00000373619 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
CITED1-202ENST00000373619 AK7Q96M32 723 aa19.35■□□□□ 0.69
CITED1-202ENST00000373619 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
CITED1-202ENST00000373619 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
CITED1-202ENST00000373619 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
CITED1-202ENST00000373619 WASHC2AQ641Q2 1341 aa19.33■□□□□ 0.69
CITED1-202ENST00000373619 CYP27B1O15528 508 aa19.33■□□□□ 0.68
CITED1-202ENST00000373619 C4BP0C0L5 1744 aa19.33■□□□□ 0.68
CITED1-202ENST00000373619 TOGARAM1Q9Y4F4 1720 aa19.32■□□□□ 0.68
CITED1-202ENST00000373619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.32■□□□□ 0.68
CITED1-202ENST00000373619 MSL1Q68DK7 614 aa19.31■□□□□ 0.68
CITED1-202ENST00000373619 TMOD3Q9NYL9 352 aa19.31■□□□□ 0.68
CITED1-202ENST00000373619 NKX1-1Q15270 411 aaPredicted RBP19.3■□□□□ 0.68
CITED1-202ENST00000373619 NLGN2Q8NFZ4 835 aa19.3■□□□□ 0.68
CITED1-202ENST00000373619 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
CITED1-202ENST00000373619 IFNL2Q8IZJ0 200 aa19.29■□□□□ 0.68
CITED1-202ENST00000373619 CD2APQ9Y5K6 639 aa19.29■□□□□ 0.68
CITED1-202ENST00000373619 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
CITED1-202ENST00000373619 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
CITED1-202ENST00000373619 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
CITED1-202ENST00000373619 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
CITED1-202ENST00000373619 PIGBQ92521 554 aa19.27■□□□□ 0.68
CITED1-202ENST00000373619 EYA1Q99502 592 aa19.27■□□□□ 0.68
CITED1-202ENST00000373619 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
CITED1-202ENST00000373619 PHF14O94880 888 aa19.26■□□□□ 0.67
CITED1-202ENST00000373619 SSFA2P28290 1259 aa19.26■□□□□ 0.67
CITED1-202ENST00000373619 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
CITED1-202ENST00000373619 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
CITED1-202ENST00000373619 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
CITED1-202ENST00000373619 LOC102724428A0A0B4J2F2 783 aa19.25■□□□□ 0.67
CITED1-202ENST00000373619 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
CITED1-202ENST00000373619 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
CITED1-202ENST00000373619 SIK1P57059 783 aa19.25■□□□□ 0.67
CITED1-202ENST00000373619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.23■□□□□ 0.67
CITED1-202ENST00000373619 PHKG2P15735 406 aa19.23■□□□□ 0.67
CITED1-202ENST00000373619 ATP6V1AP38606 617 aa19.23■□□□□ 0.67
CITED1-202ENST00000373619 GNPATO15228 680 aa19.21■□□□□ 0.67
CITED1-202ENST00000373619 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
CITED1-202ENST00000373619 EIF4A2Q14240 407 aaKnown RBP19.21■□□□□ 0.67
CITED1-202ENST00000373619 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
CITED1-202ENST00000373619 UTRNP46939 3433 aa19.21■□□□□ 0.66
CITED1-202ENST00000373619 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
CITED1-202ENST00000373619 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
CITED1-202ENST00000373619 DCAF5Q96JK2 942 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms