RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
HDAC8-202ENST00000373556 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
HDAC8-202ENST00000373556 MTFR1LQ9H019 292 aa22.49■■□□□ 1.19
HDAC8-202ENST00000373556 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
HDAC8-202ENST00000373556 HSP90AB2PQ58FF8 381 aa22.48■■□□□ 1.19
HDAC8-202ENST00000373556 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
HDAC8-202ENST00000373556 DCAF8L1A6NGE4 600 aa22.47■■□□□ 1.19
HDAC8-202ENST00000373556 KCNQ4P56696 695 aa22.47■■□□□ 1.19
HDAC8-202ENST00000373556 YY1P25490 414 aa22.46■■□□□ 1.19
HDAC8-202ENST00000373556 NSD2O96028 1365 aa22.46■■□□□ 1.19
HDAC8-202ENST00000373556 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
HDAC8-202ENST00000373556 SGIP1Q9BQI5 828 aa22.45■■□□□ 1.18
HDAC8-202ENST00000373556 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.18
HDAC8-202ENST00000373556 INSRP06213 1382 aa22.45■■□□□ 1.18
HDAC8-202ENST00000373556 FLT4P35916 1363 aa22.45■■□□□ 1.18
HDAC8-202ENST00000373556 LY75O60449 1722 aa22.45■■□□□ 1.18
HDAC8-202ENST00000373556 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
HDAC8-202ENST00000373556 AKT1S1Q96B36 256 aa22.44■■□□□ 1.18
HDAC8-202ENST00000373556 TUBGCP6Q96RT7 1819 aa22.44■■□□□ 1.18
HDAC8-202ENST00000373556 FHDC1Q9C0D6 1143 aaPredicted RBP22.44■■□□□ 1.18
HDAC8-202ENST00000373556 EMILIN1Q9Y6C2 1016 aa22.43■■□□□ 1.18
HDAC8-202ENST00000373556 QSER1Q2KHR3 1735 aa22.43■■□□□ 1.18
HDAC8-202ENST00000373556 TATP17735 454 aaPredicted RBP22.42■■□□□ 1.18
HDAC8-202ENST00000373556 CGNL1Q0VF96 1302 aa22.41■■□□□ 1.18
HDAC8-202ENST00000373556 SYT17Q9BSW7 474 aa22.41■■□□□ 1.18
HDAC8-202ENST00000373556 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
HDAC8-202ENST00000373556 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
HDAC8-202ENST00000373556 ARXQ96QS3 562 aa22.4■■□□□ 1.18
HDAC8-202ENST00000373556 PNPLA7Q6ZV29 1317 aa22.39■■□□□ 1.18
HDAC8-202ENST00000373556 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
HDAC8-202ENST00000373556 POLR3GLQ9BT43 218 aa22.39■■□□□ 1.17
HDAC8-202ENST00000373556 ANKRD26Q9UPS8 1709 aa22.38■■□□□ 1.17
HDAC8-202ENST00000373556 TFCP2L1Q9NZI6 479 aa22.38■■□□□ 1.17
HDAC8-202ENST00000373556 CCNL1Q9UK58 526 aaPredicted RBP22.38■■□□□ 1.17
HDAC8-202ENST00000373556 MAP2P11137 1827 aaKnown RBP22.38■■□□□ 1.17
HDAC8-202ENST00000373556 PCDH11XQ9BZA7 1347 aa22.37■■□□□ 1.17
HDAC8-202ENST00000373556 PCDH11YQ9BZA8 1340 aa22.37■■□□□ 1.17
HDAC8-202ENST00000373556 PKD1L3Q7Z443 1732 aa22.35■■□□□ 1.17
HDAC8-202ENST00000373556 TOGARAM1Q9Y4F4 1720 aa22.35■■□□□ 1.17
HDAC8-202ENST00000373556 UTRNP46939 3433 aa22.35■■□□□ 1.17
HDAC8-202ENST00000373556 CYP27B1O15528 508 aa22.34■■□□□ 1.17
HDAC8-202ENST00000373556 COL24A1Q17RW2 1714 aa22.34■■□□□ 1.17
HDAC8-202ENST00000373556 SLC16A10Q8TF71 515 aa22.33■■□□□ 1.17
HDAC8-202ENST00000373556 ITGB4P16144 1822 aa22.33■■□□□ 1.16
HDAC8-202ENST00000373556 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
HDAC8-202ENST00000373556 C5P01031 1676 aa22.32■■□□□ 1.16
HDAC8-202ENST00000373556 NCAPD2Q15021 1401 aa22.31■■□□□ 1.16
HDAC8-202ENST00000373556 MAP3K5Q99683 1374 aa22.31■■□□□ 1.16
HDAC8-202ENST00000373556 MPRIPQ6WCQ1 1025 aa22.31■■□□□ 1.16
HDAC8-202ENST00000373556 WASHC2AQ641Q2 1341 aa22.31■■□□□ 1.16
HDAC8-202ENST00000373556 POLD1P28340 1107 aa22.3■■□□□ 1.16
HDAC8-202ENST00000373556 TNNT2P45379 298 aaPredicted RBP22.3■■□□□ 1.16
HDAC8-202ENST00000373556 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
HDAC8-202ENST00000373556 PALLDQ8WX93 1383 aa22.29■■□□□ 1.16
HDAC8-202ENST00000373556 MSH5O43196 834 aa22.29■■□□□ 1.16
HDAC8-202ENST00000373556 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
HDAC8-202ENST00000373556 POLKQ9UBT6 870 aa22.29■■□□□ 1.16
HDAC8-202ENST00000373556 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
HDAC8-202ENST00000373556 EYA1Q99502 592 aa22.28■■□□□ 1.16
HDAC8-202ENST00000373556 COL23A1Q86Y22 540 aaPredicted RBP22.27■■□□□ 1.16
HDAC8-202ENST00000373556 CHD4Q14839 1912 aa22.25■■□□□ 1.15
HDAC8-202ENST00000373556 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
HDAC8-202ENST00000373556 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
HDAC8-202ENST00000373556 PIGBQ92521 554 aa22.24■■□□□ 1.15
HDAC8-202ENST00000373556 EIF4A2Q14240 407 aaKnown RBP22.23■■□□□ 1.15
HDAC8-202ENST00000373556 NKX1-1Q15270 411 aaPredicted RBP22.23■■□□□ 1.15
HDAC8-202ENST00000373556 MSL1Q68DK7 614 aa22.23■■□□□ 1.15
HDAC8-202ENST00000373556 PANK3Q9H999 370 aa22.23■■□□□ 1.15
HDAC8-202ENST00000373556 C4BP0C0L5 1744 aa22.23■■□□□ 1.15
HDAC8-202ENST00000373556 GPR162Q16538 588 aa22.22■■□□□ 1.15
HDAC8-202ENST00000373556 NLGN2Q8NFZ4 835 aa22.22■■□□□ 1.15
HDAC8-202ENST00000373556 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
HDAC8-202ENST00000373556 SMARCC1Q92922 1105 aaPredicted RBP22.21■■□□□ 1.15
HDAC8-202ENST00000373556 ZNF784Q8NCA9 323 aaPredicted RBP22.19■■□□□ 1.14
HDAC8-202ENST00000373556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.19■■□□□ 1.141e-6■■□□□ 14.2
HDAC8-202ENST00000373556 PHKG2P15735 406 aa22.18■■□□□ 1.14
HDAC8-202ENST00000373556 IFNL2Q8IZJ0 200 aa22.18■■□□□ 1.14
HDAC8-202ENST00000373556 GOLGB1Q14789 3259 aaKnown RBP22.18■■□□□ 1.14
HDAC8-202ENST00000373556 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
HDAC8-202ENST00000373556 SMIM5Q71RC9 77 aa22.17■■□□□ 1.14
HDAC8-202ENST00000373556 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
HDAC8-202ENST00000373556 AK7Q96M32 723 aa22.17■■□□□ 1.14
HDAC8-202ENST00000373556 TMOD3Q9NYL9 352 aa22.17■■□□□ 1.14
HDAC8-202ENST00000373556 FLAD1Q8NFF5 587 aa22.16■■□□□ 1.14
HDAC8-202ENST00000373556 ASAP1Q9ULH1 1129 aa22.16■■□□□ 1.14
HDAC8-202ENST00000373556 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
HDAC8-202ENST00000373556 PHF14O94880 888 aa22.15■■□□□ 1.14
HDAC8-202ENST00000373556 LOC102724428A0A0B4J2F2 783 aa22.14■■□□□ 1.13
HDAC8-202ENST00000373556 HMGB2P26583 209 aaKnown RBP22.14■■□□□ 1.13
HDAC8-202ENST00000373556 SIK1P57059 783 aa22.14■■□□□ 1.13
HDAC8-202ENST00000373556 MORC1Q86VD1 984 aa22.13■■□□□ 1.13
HDAC8-202ENST00000373556 LINC00116Q8NCU8 138 aa22.13■■□□□ 1.13
HDAC8-202ENST00000373556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.11■■□□□ 1.13
HDAC8-202ENST00000373556 ITPK1Q13572 414 aa22.11■■□□□ 1.13
HDAC8-202ENST00000373556 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
HDAC8-202ENST00000373556 YBX3P16989 372 aaKnown RBP eCLIP22.1■■□□□ 1.13
HDAC8-202ENST00000373556 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
HDAC8-202ENST00000373556 KNSTRNQ9Y448 316 aa22.09■■□□□ 1.13
HDAC8-202ENST00000373556 PLEKHG2Q9H7P9 1386 aa22.09■■□□□ 1.13
HDAC8-202ENST00000373556 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms