RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
CSMD2-203ENST00000373377 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
CSMD2-203ENST00000373377 RIMS2Q9UQ26 1411 aa12.03□□□□□ -0.48
CSMD2-203ENST00000373377 CDK19Q9BWU1 502 aa12.03□□□□□ -0.48
CSMD2-203ENST00000373377 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.48
CSMD2-203ENST00000373377 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.49
CSMD2-203ENST00000373377 PLEKHM2Q8IWE5 1019 aa12.02□□□□□ -0.49
CSMD2-203ENST00000373377 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 WAPLQ7Z5K2 1190 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 FER1L4A9Z1Z3 1794 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
CSMD2-203ENST00000373377 DTNBO60941 627 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 FCHSD2O94868 740 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 RABEP1Q15276 862 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
CSMD2-203ENST00000373377 ITSN1Q15811 1721 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 ST18O60284 1047 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 PTMSP20962 102 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 CASC1Q6TDU7 716 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 MIS18AQ9NYP9 233 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 NSFL1CQ9UNZ2 370 aaKnown RBP12□□□□□ -0.49
CSMD2-203ENST00000373377 NCOA3Q9Y6Q9 1424 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 TPM2P07951 284 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 NEK4P51957 841 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 GNAI1P63096 354 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 NFE2L2Q16236 605 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 ATP7BP35670 1465 aa12□□□□□ -0.49
CSMD2-203ENST00000373377 SIPA1L2Q9P2F8 1722 aaPredicted RBP12□□□□□ -0.49
CSMD2-203ENST00000373377 SDSP20132 328 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 NUCB2P80303 420 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
CSMD2-203ENST00000373377 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
CSMD2-203ENST00000373377 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 IL16Q14005 1332 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 TTC22Q5TAA0 569 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 NME9Q86XW9 330 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
CSMD2-203ENST00000373377 NCKAP5LQ9HCH0 1330 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
CSMD2-203ENST00000373377 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 USP26Q9BXU7 913 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 UQCRHLA0A096LP55 91 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 UQCRHP07919 91 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 RILPL2Q969X0 211 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 MCM10Q7L590 875 aa11.98□□□□□ -0.49
CSMD2-203ENST00000373377 API5Q9BZZ5 524 aaKnown RBP11.98□□□□□ -0.49
CSMD2-203ENST00000373377 SLIT1O75093 1534 aa11.97□□□□□ -0.49
CSMD2-203ENST00000373377 F6X3S4 739 aa11.97□□□□□ -0.49
CSMD2-203ENST00000373377 OFD1O75665 1012 aa11.97□□□□□ -0.49
CSMD2-203ENST00000373377 PPP1R9BQ96SB3 815 aa11.97□□□□□ -0.49
CSMD2-203ENST00000373377 MEIS3Q99687 375 aa11.97□□□□□ -0.49
CSMD2-203ENST00000373377 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
CSMD2-203ENST00000373377 TMEM63CQ9P1W3 806 aa11.97□□□□□ -0.49
CSMD2-203ENST00000373377 FAM135BQ49AJ0 1406 aa11.96□□□□□ -0.49
CSMD2-203ENST00000373377 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
CSMD2-203ENST00000373377 UPF3BQ9BZI7 483 aaKnown RBP11.96□□□□□ -0.49
CSMD2-203ENST00000373377 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.49
CSMD2-203ENST00000373377 PDCL3Q9H2J4 239 aa11.96□□□□□ -0.49
CSMD2-203ENST00000373377 PRDM10Q9NQV6 1147 aa11.96□□□□□ -0.49
CSMD2-203ENST00000373377 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.5
CSMD2-203ENST00000373377 ADAMTS13Q76LX8 1427 aa11.96□□□□□ -0.5
CSMD2-203ENST00000373377 JARID2Q92833 1246 aaPredicted RBP11.96□□□□□ -0.5
CSMD2-203ENST00000373377 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.5
CSMD2-203ENST00000373377 MAP2P11137 1827 aaKnown RBP11.95□□□□□ -0.5
CSMD2-203ENST00000373377 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
CSMD2-203ENST00000373377 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
CSMD2-203ENST00000373377 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
CSMD2-203ENST00000373377 TSC1Q92574 1164 aa11.95□□□□□ -0.5
CSMD2-203ENST00000373377 METP08581 1390 aa11.94□□□□□ -0.5
CSMD2-203ENST00000373377 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
CSMD2-203ENST00000373377 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSMD2-203ENST00000373377 PNPLA6Q8IY17 1366 aa11.94□□□□□ -0.5
CSMD2-203ENST00000373377 DCTPP1Q9H773 170 aa11.94□□□□□ -0.5
CSMD2-203ENST00000373377 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
CSMD2-203ENST00000373377 ZDHHC9Q9Y397 364 aa11.94□□□□□ -0.5
CSMD2-203ENST00000373377 USP54Q70EL1 1684 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 REC8O95072 547 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 MAP4K4O95819 1239 aaPredicted RBP11.93□□□□□ -0.5
CSMD2-203ENST00000373377 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
CSMD2-203ENST00000373377 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 DIP2AQ14689 1571 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 ZNF445P59923 1031 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 ABCC4O15439 1325 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
CSMD2-203ENST00000373377 TNRQ92752 1358 aa11.93□□□□□ -0.5
CSMD2-203ENST00000373377 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
CSMD2-203ENST00000373377 MLECQ14165 292 aa11.92□□□□□ -0.5
CSMD2-203ENST00000373377 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
CSMD2-203ENST00000373377 ERC2O15083 957 aa11.92□□□□□ -0.5
CSMD2-203ENST00000373377 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
CSMD2-203ENST00000373377 C17orf53Q8N3J3 647 aaPredicted RBP11.92□□□□□ -0.5
CSMD2-203ENST00000373377 ARHGAP45Q92619 1136 aa11.92□□□□□ -0.5
CSMD2-203ENST00000373377 TMX3Q96JJ7 454 aa11.92□□□□□ -0.5
CSMD2-203ENST00000373377 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
CSMD2-203ENST00000373377 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms