RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
NCDN-203ENST00000373253 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
NCDN-203ENST00000373253 LARP6Q9BRS8 491 aaKnown RBP16.27■□□□□ 0.2
NCDN-203ENST00000373253 KCNQ3O43525 872 aa16.27■□□□□ 0.2
NCDN-203ENST00000373253 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.2
NCDN-203ENST00000373253 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
NCDN-203ENST00000373253 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.2
NCDN-203ENST00000373253 GNAI2P04899 355 aa16.27■□□□□ 0.19
NCDN-203ENST00000373253 HOXC9P31274 260 aa16.27■□□□□ 0.19
NCDN-203ENST00000373253 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.19
NCDN-203ENST00000373253 PIK3C2BO00750 1634 aa16.27■□□□□ 0.19
NCDN-203ENST00000373253 PTPRMP28827 1452 aa16.27■□□□□ 0.19
NCDN-203ENST00000373253 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
NCDN-203ENST00000373253 TBX22Q9Y458 520 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 DEPDC5O75140 1603 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 NUCB1Q02818 461 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 LMTK2Q8IWU2 1503 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 TBC1D32Q96NH3 1257 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 RIMBP3CA6NJZ7 1639 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 RIMBP3BA6NNM3 1639 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 RIMBP3Q9UFD9 1639 aa16.26■□□□□ 0.19
NCDN-203ENST00000373253 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
NCDN-203ENST00000373253 CDC45O75419 566 aa16.25■□□□□ 0.19
NCDN-203ENST00000373253 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
NCDN-203ENST00000373253 AAMPQ13685 434 aa16.25■□□□□ 0.19
NCDN-203ENST00000373253 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
NCDN-203ENST00000373253 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
NCDN-203ENST00000373253 LAMC1P11047 1609 aa16.25■□□□□ 0.19
NCDN-203ENST00000373253 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
NCDN-203ENST00000373253 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
NCDN-203ENST00000373253 SMC5Q8IY18 1101 aa16.24■□□□□ 0.19
NCDN-203ENST00000373253 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
NCDN-203ENST00000373253 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
NCDN-203ENST00000373253 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
NCDN-203ENST00000373253 PLEKHO1Q53GL0 409 aaPredicted RBP16.23■□□□□ 0.19
NCDN-203ENST00000373253 PTCD1O75127 700 aaKnown RBP16.23■□□□□ 0.19
NCDN-203ENST00000373253 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
NCDN-203ENST00000373253 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
NCDN-203ENST00000373253 PLEKHG3A1L390 1219 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 GOLGA6L22H0YM25 854 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 CHL1O00533 1208 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
NCDN-203ENST00000373253 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 EVA1CP58658 441 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 SRCIN1Q9C0H9 1055 aa16.22■□□□□ 0.19
NCDN-203ENST00000373253 GCP02774 474 aa16.21■□□□□ 0.19
NCDN-203ENST00000373253 NEK4P51957 841 aa16.21■□□□□ 0.19
NCDN-203ENST00000373253 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
NCDN-203ENST00000373253 FLT4P35916 1363 aa16.2■□□□□ 0.18
NCDN-203ENST00000373253 MSH6P52701 1360 aa16.2■□□□□ 0.18
NCDN-203ENST00000373253 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
NCDN-203ENST00000373253 SIGLEC1Q9BZZ2 1709 aa16.2■□□□□ 0.18
NCDN-203ENST00000373253 MYO5BQ9ULV0 1848 aa16.2■□□□□ 0.18
NCDN-203ENST00000373253 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
NCDN-203ENST00000373253 GNAI3P08754 354 aa16.19■□□□□ 0.18
NCDN-203ENST00000373253 CCT4P50991 539 aaKnown RBP16.19■□□□□ 0.18
NCDN-203ENST00000373253 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
NCDN-203ENST00000373253 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
NCDN-203ENST00000373253 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
NCDN-203ENST00000373253 ARHGEF40Q8TER5 1519 aa16.19■□□□□ 0.18
NCDN-203ENST00000373253 MYOM1P52179 1685 aa16.19■□□□□ 0.18
NCDN-203ENST00000373253 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
NCDN-203ENST00000373253 SDSP20132 328 aa16.18■□□□□ 0.18
NCDN-203ENST00000373253 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
NCDN-203ENST00000373253 CWF19L2Q2TBE0 894 aaKnown RBP16.18■□□□□ 0.18
NCDN-203ENST00000373253 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
NCDN-203ENST00000373253 CPS1P31327 1500 aa16.18■□□□□ 0.18
NCDN-203ENST00000373253 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
NCDN-203ENST00000373253 FAM177BA6PVY3 158 aa16.17■□□□□ 0.18
NCDN-203ENST00000373253 PRDM11Q9NQV5 511 aa16.17■□□□□ 0.18
NCDN-203ENST00000373253 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
NCDN-203ENST00000373253 PPLO60437 1756 aa16.17■□□□□ 0.18
NCDN-203ENST00000373253 FGD1P98174 961 aa16.17■□□□□ 0.18
NCDN-203ENST00000373253 PA2G4Q9UQ80 394 aaKnown RBP16.17■□□□□ 0.18
NCDN-203ENST00000373253 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 MCCP23508 829 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 PLEKHM2Q8IWE5 1019 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 ST18O60284 1047 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 IFIT2P09913 472 aaKnown RBP16.16■□□□□ 0.18
NCDN-203ENST00000373253 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
NCDN-203ENST00000373253 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
NCDN-203ENST00000373253 USP19O94966 1318 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 MCTP1Q6DN14 999 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
NCDN-203ENST00000373253 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 REC8O95072 547 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 CD163L1Q9NR16 1453 aa16.15■□□□□ 0.18
NCDN-203ENST00000373253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
NCDN-203ENST00000373253 TRAK2O60296 914 aa16.14■□□□□ 0.17
NCDN-203ENST00000373253 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms