RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 EIF4A2Q14240 407 aaKnown RBP20.32■□□□□ 0.84
SNX21-203ENST00000372541 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
SNX21-203ENST00000372541 MEGF6O75095 1541 aa20.32■□□□□ 0.84
SNX21-203ENST00000372541 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
SNX21-203ENST00000372541 RAPGEF4Q8WZA2 1011 aa20.3■□□□□ 0.84
SNX21-203ENST00000372541 PPP1R1BQ9UD71 204 aaPredicted RBP20.3■□□□□ 0.84
SNX21-203ENST00000372541 MTHFSP49914 203 aa20.29■□□□□ 0.84
SNX21-203ENST00000372541 PLSCR1O15162 318 aa20.28■□□□□ 0.84
SNX21-203ENST00000372541 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
SNX21-203ENST00000372541 MARCH10Q8NA82 808 aaPredicted RBP20.28■□□□□ 0.84
SNX21-203ENST00000372541 EYA1Q99502 592 aa20.28■□□□□ 0.84
SNX21-203ENST00000372541 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
SNX21-203ENST00000372541 BCL9O00512 1426 aa20.26■□□□□ 0.83
SNX21-203ENST00000372541 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
SNX21-203ENST00000372541 DCAF8L1A6NGE4 600 aa20.25■□□□□ 0.83
SNX21-203ENST00000372541 ZCRB1Q8TBF4 217 aaKnown RBP20.24■□□□□ 0.83
SNX21-203ENST00000372541 DDX54Q8TDD1 881 aaKnown RBP20.23■□□□□ 0.83
SNX21-203ENST00000372541 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
SNX21-203ENST00000372541 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
SNX21-203ENST00000372541 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
SNX21-203ENST00000372541 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 IL13P35225 146 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 PTF1AQ7RTS3 328 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 PROM2Q8N271 834 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 SHANK3Q9BYB0 1731 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 PCDH11YQ9BZA8 1340 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
SNX21-203ENST00000372541 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
SNX21-203ENST00000372541 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
SNX21-203ENST00000372541 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
SNX21-203ENST00000372541 PKD1L3Q7Z443 1732 aa20.19■□□□□ 0.82
SNX21-203ENST00000372541 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
SNX21-203ENST00000372541 UTRNP46939 3433 aa20.19■□□□□ 0.82
SNX21-203ENST00000372541 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
SNX21-203ENST00000372541 NHSQ6T4R5 1651 aa20.17■□□□□ 0.82
SNX21-203ENST00000372541 KDRP35968 1356 aa20.17■□□□□ 0.82
SNX21-203ENST00000372541 SBF2Q86WG5 1849 aa20.16■□□□□ 0.82
SNX21-203ENST00000372541 PTGER2P43116 358 aa20.16■□□□□ 0.82
SNX21-203ENST00000372541 SULT6B1Q6IMI4 303 aa20.16■□□□□ 0.82
SNX21-203ENST00000372541 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
SNX21-203ENST00000372541 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
SNX21-203ENST00000372541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX21-203ENST00000372541 RGPD3A6NKT7 1758 aaPredicted RBP20.16■□□□□ 0.82
SNX21-203ENST00000372541 RGPD4Q7Z3J3 1758 aa20.16■□□□□ 0.82
SNX21-203ENST00000372541 RALBP1Q15311 655 aa20.15■□□□□ 0.82
SNX21-203ENST00000372541 ZBTB7AO95365 584 aa20.14■□□□□ 0.81
SNX21-203ENST00000372541 CASZ1Q86V15 1759 aa20.13■□□□□ 0.81
SNX21-203ENST00000372541 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
SNX21-203ENST00000372541 CYP27B1O15528 508 aa20.13■□□□□ 0.81
SNX21-203ENST00000372541 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
SNX21-203ENST00000372541 HMOX1P09601 288 aa20.11■□□□□ 0.81
SNX21-203ENST00000372541 TXNRD1Q16881 649 aa20.11■□□□□ 0.81
SNX21-203ENST00000372541 AMOTQ4VCS5 1084 aa20.11■□□□□ 0.81
SNX21-203ENST00000372541 PLEKHO1Q53GL0 409 aaPredicted RBP20.11■□□□□ 0.81
SNX21-203ENST00000372541 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
SNX21-203ENST00000372541 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
SNX21-203ENST00000372541 SLC15A2Q16348 729 aa20.1■□□□□ 0.81
SNX21-203ENST00000372541 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
SNX21-203ENST00000372541 ZNF784Q8NCA9 323 aaPredicted RBP20.1■□□□□ 0.81
SNX21-203ENST00000372541 SYTL4Q96C24 671 aaPredicted RBP20.1■□□□□ 0.81
SNX21-203ENST00000372541 SYT17Q9BSW7 474 aa20.09■□□□□ 0.81
SNX21-203ENST00000372541 STK32BQ9NY57 414 aa20.09■□□□□ 0.81
SNX21-203ENST00000372541 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
SNX21-203ENST00000372541 PHKG2P15735 406 aa20.08■□□□□ 0.81
SNX21-203ENST00000372541 SGIP1Q9BQI5 828 aa20.08■□□□□ 0.81
SNX21-203ENST00000372541 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
SNX21-203ENST00000372541 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
SNX21-203ENST00000372541 FHDC1Q9C0D6 1143 aaPredicted RBP20.07■□□□□ 0.8
SNX21-203ENST00000372541 BTAF1O14981 1849 aa20.06■□□□□ 0.8
SNX21-203ENST00000372541 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
SNX21-203ENST00000372541 MTFR1LQ9H019 292 aa20.06■□□□□ 0.8
SNX21-203ENST00000372541 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
SNX21-203ENST00000372541 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
SNX21-203ENST00000372541 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
SNX21-203ENST00000372541 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
SNX21-203ENST00000372541 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
SNX21-203ENST00000372541 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
SNX21-203ENST00000372541 DCAF5Q96JK2 942 aa20.02■□□□□ 0.8
SNX21-203ENST00000372541 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
SNX21-203ENST00000372541 MPRIPQ6WCQ1 1025 aa20.01■□□□□ 0.79
SNX21-203ENST00000372541 RSPH6AQ9H0K4 717 aa20.01■□□□□ 0.79
SNX21-203ENST00000372541 AKAP4Q5JQC9 854 aa20■□□□□ 0.79
SNX21-203ENST00000372541 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
SNX21-203ENST00000372541 FCHSD2O94868 740 aa19.99■□□□□ 0.79
SNX21-203ENST00000372541 MTHFSDQ2M296 383 aaKnown RBP19.99■□□□□ 0.79
SNX21-203ENST00000372541 TMOD3Q9NYL9 352 aa19.99■□□□□ 0.79
SNX21-203ENST00000372541 KAT6BQ8WYB5 2073 aa19.99■□□□□ 0.79
SNX21-203ENST00000372541 ARXQ96QS3 562 aa19.98■□□□□ 0.79
SNX21-203ENST00000372541 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
SNX21-203ENST00000372541 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
SNX21-203ENST00000372541 GAS2L2Q8NHY3 880 aa19.97■□□□□ 0.79
SNX21-203ENST00000372541 C1QTNF8P60827 252 aa19.96■□□□□ 0.79
SNX21-203ENST00000372541 PIGBQ92521 554 aa19.96■□□□□ 0.79
SNX21-203ENST00000372541 ITGB4P16144 1822 aa19.96■□□□□ 0.79
SNX21-203ENST00000372541 PALLDQ8WX93 1383 aa19.95■□□□□ 0.79
SNX21-203ENST00000372541 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
SNX21-203ENST00000372541 ANP32CO43423 234 aa19.94■□□□□ 0.78
SNX21-203ENST00000372541 NEFMP07197 916 aa19.94■□□□□ 0.78
SNX21-203ENST00000372541 CABP4P57796 275 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms