RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 HMOX1P09601 288 aa21.09■□□□□ 0.97
C9orf78-201ENST00000372447 RGPD1P0DJD0 1748 aa21.08■□□□□ 0.97
C9orf78-201ENST00000372447 U2AF1L5P0DN76 240 aaPredicted RBP21.08■□□□□ 0.97
C9orf78-201ENST00000372447 U2AF1Q01081 240 aaKnown RBP eCLIP21.08■□□□□ 0.97
C9orf78-201ENST00000372447 IL2RBP14784 551 aa21.08■□□□□ 0.96
C9orf78-201ENST00000372447 KDRP35968 1356 aa21.06■□□□□ 0.96
C9orf78-201ENST00000372447 DISP2A7MBM2 1401 aa21.05■□□□□ 0.96
C9orf78-201ENST00000372447 RAPGEF4Q8WZA2 1011 aa21.05■□□□□ 0.96
C9orf78-201ENST00000372447 CDCA7Q9BWT1 371 aaPredicted RBP21.05■□□□□ 0.96
C9orf78-201ENST00000372447 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
C9orf78-201ENST00000372447 SEPT12Q8IYM1 358 aa21.04■□□□□ 0.96
C9orf78-201ENST00000372447 MEGF6O75095 1541 aa21.04■□□□□ 0.96
C9orf78-201ENST00000372447 A0A0G2JS52 829 aa21.03■□□□□ 0.96
C9orf78-201ENST00000372447 TATP17735 454 aaPredicted RBP21.03■□□□□ 0.96
C9orf78-201ENST00000372447 MYT1Q01538 1121 aa21.03■□□□□ 0.96
C9orf78-201ENST00000372447 FCHSD2O94868 740 aa21.02■□□□□ 0.96
C9orf78-201ENST00000372447 RSPH6AQ9H0K4 717 aa21.02■□□□□ 0.96
C9orf78-201ENST00000372447 CDCA7LQ96GN5 454 aa21.02■□□□□ 0.96
C9orf78-201ENST00000372447 OVOS2A0A0G2JMS6 1433 aa21■□□□□ 0.95
C9orf78-201ENST00000372447 EXOC5O00471 708 aa21■□□□□ 0.95
C9orf78-201ENST00000372447 PRKAR2BP31323 418 aa21■□□□□ 0.95
C9orf78-201ENST00000372447 DDB1Q16531 1140 aa21■□□□□ 0.95
C9orf78-201ENST00000372447 THSD7AQ9UPZ6 1657 aa21■□□□□ 0.95
C9orf78-201ENST00000372447 RGS12O14924 1447 aa20.99■□□□□ 0.95
C9orf78-201ENST00000372447 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
C9orf78-201ENST00000372447 RCAN3Q9UKA8 241 aa20.98■□□□□ 0.95
C9orf78-201ENST00000372447 WNK3Q9BYP7 1800 aa20.98■□□□□ 0.95
C9orf78-201ENST00000372447 PHACTR3Q96KR7 559 aa20.97■□□□□ 0.95
C9orf78-201ENST00000372447 PLEKHF1Q96S99 279 aa20.97■□□□□ 0.95
C9orf78-201ENST00000372447 ZNF521Q96K83 1311 aa20.96■□□□□ 0.95
C9orf78-201ENST00000372447 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
C9orf78-201ENST00000372447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
C9orf78-201ENST00000372447 PARP4Q9UKK3 1724 aaKnown RBP20.96■□□□□ 0.95
C9orf78-201ENST00000372447 PLEKHO1Q53GL0 409 aaPredicted RBP20.95■□□□□ 0.94
C9orf78-201ENST00000372447 AMOTQ4VCS5 1084 aa20.95■□□□□ 0.94
C9orf78-201ENST00000372447 DDX54Q8TDD1 881 aaKnown RBP20.95■□□□□ 0.94
C9orf78-201ENST00000372447 SPG7Q9UQ90 795 aa20.95■□□□□ 0.94
C9orf78-201ENST00000372447 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
C9orf78-201ENST00000372447 TNS2Q63HR2 1409 aa20.94■□□□□ 0.94
C9orf78-201ENST00000372447 PNNQ9H307 717 aaKnown RBP20.94■□□□□ 0.94
C9orf78-201ENST00000372447 PLEKHG2Q9H7P9 1386 aa20.93■□□□□ 0.94
C9orf78-201ENST00000372447 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
C9orf78-201ENST00000372447 MTHFSDQ2M296 383 aaKnown RBP20.93■□□□□ 0.94
C9orf78-201ENST00000372447 KRT27Q7Z3Y8 459 aa20.93■□□□□ 0.94
C9orf78-201ENST00000372447 MARCH10Q8NA82 808 aaPredicted RBP20.93■□□□□ 0.94
C9orf78-201ENST00000372447 CYP27B1O15528 508 aa20.92■□□□□ 0.94
C9orf78-201ENST00000372447 TSHZ2Q9NRE2 1034 aa20.92■□□□□ 0.94
C9orf78-201ENST00000372447 APAF1O14727 1248 aa20.92■□□□□ 0.94
C9orf78-201ENST00000372447 FAM182BQ5T319 152 aa20.92■□□□□ 0.94
C9orf78-201ENST00000372447 NGEFQ8N5V2 710 aa20.92■□□□□ 0.94
C9orf78-201ENST00000372447 GOLGA2Q08379 1002 aa20.91■□□□□ 0.94
C9orf78-201ENST00000372447 PCDH11XQ9BZA7 1347 aa20.91■□□□□ 0.94
C9orf78-201ENST00000372447 PCDH11YQ9BZA8 1340 aa20.91■□□□□ 0.94
C9orf78-201ENST00000372447 ZNF530Q6P9A1 599 aaPredicted RBP20.9■□□□□ 0.94
C9orf78-201ENST00000372447 RUNDC1Q96C34 613 aa20.9■□□□□ 0.94
C9orf78-201ENST00000372447 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
C9orf78-201ENST00000372447 BRWD3Q6RI45 1802 aa20.9■□□□□ 0.94
C9orf78-201ENST00000372447 NEFMP07197 916 aa20.9■□□□□ 0.94
C9orf78-201ENST00000372447 PHKG2P15735 406 aa20.89■□□□□ 0.93
C9orf78-201ENST00000372447 B4GALNT3Q6L9W6 998 aa20.89■□□□□ 0.93
C9orf78-201ENST00000372447 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.93
C9orf78-201ENST00000372447 MAPK8IP3Q9UPT6 1336 aa20.89■□□□□ 0.93
C9orf78-201ENST00000372447 SHANK3Q9BYB0 1731 aa20.88■□□□□ 0.93
C9orf78-201ENST00000372447 DUSP27Q5VZP5 1158 aa20.87■□□□□ 0.93
C9orf78-201ENST00000372447 GAS2L2Q8NHY3 880 aa20.87■□□□□ 0.93
C9orf78-201ENST00000372447 SLFN5Q08AF3 891 aa20.86■□□□□ 0.93
C9orf78-201ENST00000372447 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
C9orf78-201ENST00000372447 ILDR2Q71H61 639 aa20.86■□□□□ 0.93
C9orf78-201ENST00000372447 NKX1-1Q15270 411 aaPredicted RBP20.85■□□□□ 0.93
C9orf78-201ENST00000372447 AKAP4Q5JQC9 854 aa20.85■□□□□ 0.93
C9orf78-201ENST00000372447 EP400Q96L91 3159 aa20.85■□□□□ 0.93
C9orf78-201ENST00000372447 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
C9orf78-201ENST00000372447 TMPOP42166 694 aaKnown RBP20.83■□□□□ 0.93
C9orf78-201ENST00000372447 MPRIPQ6WCQ1 1025 aa20.83■□□□□ 0.93
C9orf78-201ENST00000372447 TRMT2AQ8IZ69 625 aaKnown RBP20.83■□□□□ 0.93
C9orf78-201ENST00000372447 RRP7AQ9Y3A4 280 aaKnown RBP20.83■□□□□ 0.93
C9orf78-201ENST00000372447 GNAT3A8MTJ3 354 aa20.82■□□□□ 0.92
C9orf78-201ENST00000372447 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
C9orf78-201ENST00000372447 NEUROD2Q15784 382 aa20.82■□□□□ 0.92
C9orf78-201ENST00000372447 HSP90AB1P08238 724 aaKnown RBP20.81■□□□□ 0.92
C9orf78-201ENST00000372447 RIPK4P57078 832 aa20.81■□□□□ 0.92
C9orf78-201ENST00000372447 DCAF5Q96JK2 942 aa20.81■□□□□ 0.92
C9orf78-201ENST00000372447 LGR6Q9HBX8 967 aa20.81■□□□□ 0.92
C9orf78-201ENST00000372447 MAP3K5Q99683 1374 aa20.81■□□□□ 0.92
C9orf78-201ENST00000372447 BCL9O00512 1426 aa20.8■□□□□ 0.92
C9orf78-201ENST00000372447 E9PSI1 815 aa20.8■□□□□ 0.92
C9orf78-201ENST00000372447 IL17REQ8NFR9 667 aa20.8■□□□□ 0.92
C9orf78-201ENST00000372447 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
C9orf78-201ENST00000372447 KDM6AO15550 1401 aaPredicted RBP20.79■□□□□ 0.92
C9orf78-201ENST00000372447 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
C9orf78-201ENST00000372447 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
C9orf78-201ENST00000372447 WWC1Q8IX03 1113 aa20.78■□□□□ 0.92
C9orf78-201ENST00000372447 SPINK5Q9NQ38 1064 aaPredicted RBP20.78■□□□□ 0.92
C9orf78-201ENST00000372447 KCNQ2O43526 872 aa20.77■□□□□ 0.92
C9orf78-201ENST00000372447 DCTN1Q14203 1278 aa20.77■□□□□ 0.92
C9orf78-201ENST00000372447 MCM10Q7L590 875 aa20.77■□□□□ 0.92
C9orf78-201ENST00000372447 HTATSF1O43719 755 aaKnown RBP20.77■□□□□ 0.91
C9orf78-201ENST00000372447 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.91
C9orf78-201ENST00000372447 EXOC6Q8TAG9 804 aa20.77■□□□□ 0.91
C9orf78-201ENST00000372447 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms