RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 CRBNQ96SW2 442 aa23.29■■□□□ 1.32
CD40-202ENST00000372285 KIAA0232Q92628 1395 aa23.29■■□□□ 1.32
CD40-202ENST00000372285 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
CD40-202ENST00000372285 MAP3K5Q99683 1374 aa23.28■■□□□ 1.32
CD40-202ENST00000372285 GNAT3A8MTJ3 354 aa23.28■■□□□ 1.32
CD40-202ENST00000372285 ZNF428Q96B54 188 aa23.28■■□□□ 1.32
CD40-202ENST00000372285 CHL1O00533 1208 aa23.27■■□□□ 1.32
CD40-202ENST00000372285 PDE3AQ14432 1141 aa23.27■■□□□ 1.32
CD40-202ENST00000372285 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
CD40-202ENST00000372285 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
CD40-202ENST00000372285 CHRNA2Q15822 529 aa23.24■■□□□ 1.31
CD40-202ENST00000372285 ALDH1L2Q3SY69 923 aa23.24■■□□□ 1.31
CD40-202ENST00000372285 CCDC136Q96JN2 1154 aa23.24■■□□□ 1.31
CD40-202ENST00000372285 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
CD40-202ENST00000372285 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
CD40-202ENST00000372285 VAMP4O75379 141 aa23.22■■□□□ 1.31
CD40-202ENST00000372285 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
CD40-202ENST00000372285 BCL2L13Q9BXK5 485 aa23.22■■□□□ 1.31
CD40-202ENST00000372285 VIRMAQ69YN4 1812 aaKnown RBP23.22■■□□□ 1.31
CD40-202ENST00000372285 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
CD40-202ENST00000372285 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
CD40-202ENST00000372285 COL22A1Q8NFW1 1626 aaPredicted RBP23.21■■□□□ 1.31
CD40-202ENST00000372285 FRAT1Q92837 279 aaPredicted RBP23.21■■□□□ 1.31
CD40-202ENST00000372285 PLEKHG2Q9H7P9 1386 aa23.21■■□□□ 1.31
CD40-202ENST00000372285 PRDM11Q9NQV5 511 aa23.2■■□□□ 1.3
CD40-202ENST00000372285 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
CD40-202ENST00000372285 TSPYL6Q8N831 410 aa23.19■■□□□ 1.3
CD40-202ENST00000372285 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
CD40-202ENST00000372285 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
CD40-202ENST00000372285 TWISTNBQ3B726 338 aaPredicted RBP23.19■■□□□ 1.3
CD40-202ENST00000372285 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
CD40-202ENST00000372285 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
CD40-202ENST00000372285 HAP1P54257 671 aaPredicted RBP23.18■■□□□ 1.3
CD40-202ENST00000372285 AKAP4Q5JQC9 854 aa23.18■■□□□ 1.3
CD40-202ENST00000372285 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
CD40-202ENST00000372285 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
CD40-202ENST00000372285 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
CD40-202ENST00000372285 KIF16BQ96L93 1317 aa23.17■■□□□ 1.3
CD40-202ENST00000372285 CSB-PGBD3P0DP91 1061 aa23.16■■□□□ 1.3
CD40-202ENST00000372285 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
CD40-202ENST00000372285 OVOS2A0A0G2JMS6 1433 aa23.15■■□□□ 1.3
CD40-202ENST00000372285 ADAMTS7Q9UKP4 1686 aa23.15■■□□□ 1.3
CD40-202ENST00000372285 MS4A1P11836 297 aa23.15■■□□□ 1.3
CD40-202ENST00000372285 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
CD40-202ENST00000372285 COL5A2P05997 1499 aaPredicted RBP23.15■■□□□ 1.3
CD40-202ENST00000372285 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.3
CD40-202ENST00000372285 TSPYL4Q9UJ04 414 aa23.14■■□□□ 1.3
CD40-202ENST00000372285 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.3
CD40-202ENST00000372285 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.29
CD40-202ENST00000372285 TAF7Q15545 349 aaPredicted RBP23.13■■□□□ 1.29
CD40-202ENST00000372285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.29
CD40-202ENST00000372285 COL16A1Q07092 1604 aaPredicted RBP23.13■■□□□ 1.29
CD40-202ENST00000372285 ELL2O00472 640 aaPredicted RBP23.13■■□□□ 1.29
CD40-202ENST00000372285 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
CD40-202ENST00000372285 MEGF6O75095 1541 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 IPO8O15397 1037 aaKnown RBP23.12■■□□□ 1.29
CD40-202ENST00000372285 TOM1O60784 492 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 RLBP1P12271 317 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
CD40-202ENST00000372285 MIS18AQ9NYP9 233 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 NOB1Q9ULX3 412 aaKnown RBP23.12■■□□□ 1.29
CD40-202ENST00000372285 TNNQ9UQP3 1299 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
CD40-202ENST00000372285 ATF7IPQ6VMQ6 1270 aa23.11■■□□□ 1.29
CD40-202ENST00000372285 PARP4Q9UKK3 1724 aaKnown RBP23.11■■□□□ 1.29
CD40-202ENST00000372285 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
CD40-202ENST00000372285 COL14A1Q05707 1796 aaKnown RBP23.11■■□□□ 1.29
CD40-202ENST00000372285 DZIP1LQ8IYY4 767 aaKnown RBP23.11■■□□□ 1.29
CD40-202ENST00000372285 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
CD40-202ENST00000372285 AAMPQ13685 434 aa23.1■■□□□ 1.29
CD40-202ENST00000372285 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
CD40-202ENST00000372285 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
CD40-202ENST00000372285 TRIM27P14373 513 aa23.09■■□□□ 1.29
CD40-202ENST00000372285 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
CD40-202ENST00000372285 ARHGAP45Q92619 1136 aa23.09■■□□□ 1.29
CD40-202ENST00000372285 RNMTO43148 476 aaKnown RBP23.08■■□□□ 1.29
CD40-202ENST00000372285 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
CD40-202ENST00000372285 SOS1Q07889 1333 aaPredicted RBP23.07■■□□□ 1.28
CD40-202ENST00000372285 FTSJ3Q8IY81 847 aaKnown RBP23.07■■□□□ 1.28
CD40-202ENST00000372285 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
CD40-202ENST00000372285 CACNA1FO60840 1977 aa23.06■■□□□ 1.28
CD40-202ENST00000372285 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
CD40-202ENST00000372285 MVPQ14764 893 aaKnown RBP23.05■■□□□ 1.28
CD40-202ENST00000372285 TOM1L2Q6ZVM7 507 aa23.05■■□□□ 1.28
CD40-202ENST00000372285 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
CD40-202ENST00000372285 TEFQ10587 303 aa23.04■■□□□ 1.28
CD40-202ENST00000372285 PHKG2P15735 406 aa23.02■■□□□ 1.28
CD40-202ENST00000372285 TCERG1O14776 1098 aaKnown RBP23.02■■□□□ 1.28
CD40-202ENST00000372285 EVA1CP58658 441 aa23.02■■□□□ 1.28
CD40-202ENST00000372285 IFNL2Q8IZJ0 200 aa23.02■■□□□ 1.28
CD40-202ENST00000372285 LARP1Q6PKG0 1096 aaKnown RBP23.01■■□□□ 1.27
CD40-202ENST00000372285 KDM6AO15550 1401 aaPredicted RBP23.01■■□□□ 1.27
CD40-202ENST00000372285 PIP4K2BP78356 416 aa23■■□□□ 1.27
CD40-202ENST00000372285 KDM2BQ8NHM5 1336 aa23■■□□□ 1.27
CD40-202ENST00000372285 API5Q9BZZ5 524 aaKnown RBP22.99■■□□□ 1.27
CD40-202ENST00000372285 STRN4Q9NRL3 753 aa22.99■■□□□ 1.27
CD40-202ENST00000372285 DDX19BQ9UMR2 479 aa22.99■■□□□ 1.27
CD40-202ENST00000372285 UBAP1LF5GYI3 381 aa22.99■■□□□ 1.27
CD40-202ENST00000372285 TMEM57Q8N5G2 664 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms