RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
TMEM254-201ENST00000372273 THSD7AQ9UPZ6 1657 aa12.81□□□□□ -0.36
TMEM254-201ENST00000372273 KCNQ2O43526 872 aa12.81□□□□□ -0.36
TMEM254-201ENST00000372273 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
TMEM254-201ENST00000372273 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
TMEM254-201ENST00000372273 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
TMEM254-201ENST00000372273 ZCRB1Q8TBF4 217 aaKnown RBP12.79□□□□□ -0.36
TMEM254-201ENST00000372273 CYP27B1O15528 508 aa12.79□□□□□ -0.36
TMEM254-201ENST00000372273 RALBP1Q15311 655 aa12.79□□□□□ -0.36
TMEM254-201ENST00000372273 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
TMEM254-201ENST00000372273 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
TMEM254-201ENST00000372273 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
TMEM254-201ENST00000372273 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
TMEM254-201ENST00000372273 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
TMEM254-201ENST00000372273 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
TMEM254-201ENST00000372273 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
TMEM254-201ENST00000372273 LRRC37A3O60309 1634 aa12.77□□□□□ -0.37
TMEM254-201ENST00000372273 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
TMEM254-201ENST00000372273 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
TMEM254-201ENST00000372273 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
TMEM254-201ENST00000372273 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
TMEM254-201ENST00000372273 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
TMEM254-201ENST00000372273 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
TMEM254-201ENST00000372273 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
TMEM254-201ENST00000372273 UTRNP46939 3433 aa12.75□□□□□ -0.37
TMEM254-201ENST00000372273 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
TMEM254-201ENST00000372273 NCAPD2Q15021 1401 aa12.74□□□□□ -0.37
TMEM254-201ENST00000372273 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
TMEM254-201ENST00000372273 SUPT16HQ9Y5B9 1047 aaKnown RBP12.74□□□□□ -0.37
TMEM254-201ENST00000372273 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
TMEM254-201ENST00000372273 APBA3O96018 575 aa12.73□□□□□ -0.37
TMEM254-201ENST00000372273 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
TMEM254-201ENST00000372273 KDRP35968 1356 aa12.73□□□□□ -0.37
TMEM254-201ENST00000372273 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
TMEM254-201ENST00000372273 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
TMEM254-201ENST00000372273 PHKG2P15735 406 aa12.72□□□□□ -0.37
TMEM254-201ENST00000372273 KCNQ4P56696 695 aa12.72□□□□□ -0.37
TMEM254-201ENST00000372273 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
TMEM254-201ENST00000372273 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
TMEM254-201ENST00000372273 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
TMEM254-201ENST00000372273 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
TMEM254-201ENST00000372273 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
TMEM254-201ENST00000372273 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
TMEM254-201ENST00000372273 EZH2Q15910 746 aaKnown RBP12.71□□□□□ -0.38
TMEM254-201ENST00000372273 KAT6BQ8WYB5 2073 aa12.7□□□□□ -0.38
TMEM254-201ENST00000372273 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
TMEM254-201ENST00000372273 PLEKHO1Q53GL0 409 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-201ENST00000372273 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
TMEM254-201ENST00000372273 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
TMEM254-201ENST00000372273 RGPD1P0DJD0 1748 aa12.7□□□□□ -0.38
TMEM254-201ENST00000372273 WNK3Q9BYP7 1800 aa12.7□□□□□ -0.38
TMEM254-201ENST00000372273 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
TMEM254-201ENST00000372273 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
TMEM254-201ENST00000372273 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
TMEM254-201ENST00000372273 NEFLP07196 543 aa12.68□□□□□ -0.38
TMEM254-201ENST00000372273 PROM2Q8N271 834 aa12.68□□□□□ -0.38
TMEM254-201ENST00000372273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM254-201ENST00000372273 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
TMEM254-201ENST00000372273 SHANK3Q9BYB0 1731 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 FCHSD2O94868 740 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 PIGBQ92521 554 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 PLEKHF1Q96S99 279 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
TMEM254-201ENST00000372273 HNRNPUQ00839 825 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMEM254-201ENST00000372273 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
TMEM254-201ENST00000372273 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
TMEM254-201ENST00000372273 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
TMEM254-201ENST00000372273 BAG6P46379 1132 aa12.66□□□□□ -0.38
TMEM254-201ENST00000372273 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
TMEM254-201ENST00000372273 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
TMEM254-201ENST00000372273 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
TMEM254-201ENST00000372273 WDR43Q15061 677 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMEM254-201ENST00000372273 MCM10Q7L590 875 aa12.65□□□□□ -0.38
TMEM254-201ENST00000372273 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
TMEM254-201ENST00000372273 KDM6AO15550 1401 aaPredicted RBP12.65□□□□□ -0.38
TMEM254-201ENST00000372273 BCL9O00512 1426 aa12.64□□□□□ -0.39
TMEM254-201ENST00000372273 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
TMEM254-201ENST00000372273 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
TMEM254-201ENST00000372273 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
TMEM254-201ENST00000372273 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
TMEM254-201ENST00000372273 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
TMEM254-201ENST00000372273 FAM9BQ8IZU0 186 aa12.63□□□□□ -0.39
TMEM254-201ENST00000372273 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
TMEM254-201ENST00000372273 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
TMEM254-201ENST00000372273 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
TMEM254-201ENST00000372273 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
TMEM254-201ENST00000372273 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
TMEM254-201ENST00000372273 PNISRQ8TF01 805 aaKnown RBP12.62□□□□□ -0.39
TMEM254-201ENST00000372273 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
TMEM254-201ENST00000372273 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
TMEM254-201ENST00000372273 CABP4P57796 275 aa12.61□□□□□ -0.39
TMEM254-201ENST00000372273 FKBP8Q14318 412 aa12.61□□□□□ -0.39
TMEM254-201ENST00000372273 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
TMEM254-201ENST00000372273 PLSCR1O15162 318 aa12.61□□□□□ -0.39
TMEM254-201ENST00000372273 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
TMEM254-201ENST00000372273 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
TMEM254-201ENST00000372273 DOT1LQ8TEK3 1739 aa12.6□□□□□ -0.39
TMEM254-201ENST00000372273 PTCD1O75127 700 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms