RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 MBIPQ9NS73 344 aa23.62■■□□□ 1.37
CCDC17-201ENST00000372044 UBAP1LF5GYI3 381 aa23.62■■□□□ 1.37
CCDC17-201ENST00000372044 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
CCDC17-201ENST00000372044 MEGF6O75095 1541 aa23.61■■□□□ 1.37
CCDC17-201ENST00000372044 CSB-PGBD3P0DP91 1061 aa23.61■■□□□ 1.37
CCDC17-201ENST00000372044 CALD1Q05682 793 aaKnown RBP23.61■■□□□ 1.37
CCDC17-201ENST00000372044 CFAP44Q96MT7 982 aa23.61■■□□□ 1.37
CCDC17-201ENST00000372044 RARSP54136 660 aaKnown RBP23.6■■□□□ 1.37
CCDC17-201ENST00000372044 GNAI1P63096 354 aa23.6■■□□□ 1.37
CCDC17-201ENST00000372044 C20orf194Q5TEA3 1177 aa23.6■■□□□ 1.37
CCDC17-201ENST00000372044 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
CCDC17-201ENST00000372044 PKD1L3Q7Z443 1732 aa23.6■■□□□ 1.37
CCDC17-201ENST00000372044 GNAT3A8MTJ3 354 aa23.6■■□□□ 1.37
CCDC17-201ENST00000372044 BCL2L13Q9BXK5 485 aa23.59■■□□□ 1.37
CCDC17-201ENST00000372044 RTF1Q92541 710 aaKnown RBP23.58■■□□□ 1.37
CCDC17-201ENST00000372044 PLCH1Q4KWH8 1693 aa23.58■■□□□ 1.36
CCDC17-201ENST00000372044 IL17REQ8NFR9 667 aa23.58■■□□□ 1.36
CCDC17-201ENST00000372044 PARP4Q9UKK3 1724 aaKnown RBP23.57■■□□□ 1.36
CCDC17-201ENST00000372044 SCN11AQ9UI33 1791 aa23.56■■□□□ 1.36
CCDC17-201ENST00000372044 WDR17Q8IZU2 1322 aa23.56■■□□□ 1.36
CCDC17-201ENST00000372044 TSPYL6Q8N831 410 aa23.56■■□□□ 1.36
CCDC17-201ENST00000372044 SIPA1L3O60292 1781 aaPredicted RBP23.56■■□□□ 1.36
CCDC17-201ENST00000372044 MIS18AQ9NYP9 233 aa23.56■■□□□ 1.36
CCDC17-201ENST00000372044 ADAMTS7Q9UKP4 1686 aa23.55■■□□□ 1.36
CCDC17-201ENST00000372044 CHL1O00533 1208 aa23.55■■□□□ 1.36
CCDC17-201ENST00000372044 HTATSF1O43719 755 aaKnown RBP23.55■■□□□ 1.36
CCDC17-201ENST00000372044 ZNF530Q6P9A1 599 aaPredicted RBP23.55■■□□□ 1.36
CCDC17-201ENST00000372044 SHANK3Q9BYB0 1731 aa23.55■■□□□ 1.36
CCDC17-201ENST00000372044 PLEKHO1Q53GL0 409 aaPredicted RBP23.54■■□□□ 1.36
CCDC17-201ENST00000372044 EXOC6Q8TAG9 804 aa23.54■■□□□ 1.36
CCDC17-201ENST00000372044 CERKQ8TCT0 537 aa23.54■■□□□ 1.36
CCDC17-201ENST00000372044 ERICH6BQ5W0A0 696 aa23.53■■□□□ 1.36
CCDC17-201ENST00000372044 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
CCDC17-201ENST00000372044 KRT24Q2M2I5 525 aa23.53■■□□□ 1.36
CCDC17-201ENST00000372044 C8orf58Q8NAV2 365 aa23.53■■□□□ 1.36
CCDC17-201ENST00000372044 LGR6Q9HBX8 967 aa23.53■■□□□ 1.36
CCDC17-201ENST00000372044 STRN4Q9NRL3 753 aa23.53■■□□□ 1.36
CCDC17-201ENST00000372044 ELL2O00472 640 aaPredicted RBP23.52■■□□□ 1.36
CCDC17-201ENST00000372044 CT47B1P0C2W7 299 aaPredicted RBP23.52■■□□□ 1.36
CCDC17-201ENST00000372044 AMOTQ4VCS5 1084 aa23.52■■□□□ 1.36
CCDC17-201ENST00000372044 LARP1Q6PKG0 1096 aaKnown RBP23.52■■□□□ 1.36
CCDC17-201ENST00000372044 RAPGEF4Q8WZA2 1011 aa23.52■■□□□ 1.36
CCDC17-201ENST00000372044 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
CCDC17-201ENST00000372044 TOM1L2Q6ZVM7 507 aa23.51■■□□□ 1.35
CCDC17-201ENST00000372044 AKAP4Q5JQC9 854 aa23.51■■□□□ 1.35
CCDC17-201ENST00000372044 SSH1Q8WYL5 1049 aa23.51■■□□□ 1.35
CCDC17-201ENST00000372044 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
CCDC17-201ENST00000372044 VAMP4O75379 141 aa23.5■■□□□ 1.35
CCDC17-201ENST00000372044 CRBNQ96SW2 442 aa23.5■■□□□ 1.35
CCDC17-201ENST00000372044 BTG4Q9NY30 223 aa23.5■■□□□ 1.35
CCDC17-201ENST00000372044 MPRIPQ6WCQ1 1025 aa23.49■■□□□ 1.35
CCDC17-201ENST00000372044 TNNQ9UQP3 1299 aa23.49■■□□□ 1.35
CCDC17-201ENST00000372044 TATP17735 454 aaPredicted RBP23.49■■□□□ 1.35
CCDC17-201ENST00000372044 PPP4R2Q9NY27 417 aa23.49■■□□□ 1.35
CCDC17-201ENST00000372044 WNK3Q9BYP7 1800 aa23.48■■□□□ 1.35
CCDC17-201ENST00000372044 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.48■■□□□ 1.35
CCDC17-201ENST00000372044 FRAT1Q92837 279 aaPredicted RBP23.48■■□□□ 1.35
CCDC17-201ENST00000372044 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
CCDC17-201ENST00000372044 TSPYL4Q9UJ04 414 aa23.47■■□□□ 1.35
CCDC17-201ENST00000372044 OVOS2A0A0G2JMS6 1433 aa23.47■■□□□ 1.35
CCDC17-201ENST00000372044 ADAMTS2O95450 1211 aa23.47■■□□□ 1.35
CCDC17-201ENST00000372044 EVA1CP58658 441 aa23.47■■□□□ 1.35
CCDC17-201ENST00000372044 SMC4Q9NTJ3 1288 aa23.47■■□□□ 1.35
CCDC17-201ENST00000372044 C1orf141Q5JVX7 400 aa23.46■■□□□ 1.35
CCDC17-201ENST00000372044 B4GALNT3Q6L9W6 998 aa23.46■■□□□ 1.35
CCDC17-201ENST00000372044 CARD10Q9BWT7 1032 aa23.45■■□□□ 1.35
CCDC17-201ENST00000372044 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
CCDC17-201ENST00000372044 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
CCDC17-201ENST00000372044 RNMTO43148 476 aaKnown RBP23.45■■□□□ 1.34
CCDC17-201ENST00000372044 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
CCDC17-201ENST00000372044 KDM6AO15550 1401 aaPredicted RBP23.44■■□□□ 1.34
CCDC17-201ENST00000372044 TCERG1O14776 1098 aaKnown RBP23.44■■□□□ 1.34
CCDC17-201ENST00000372044 TAF7Q15545 349 aaPredicted RBP23.43■■□□□ 1.34
CCDC17-201ENST00000372044 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
CCDC17-201ENST00000372044 NWD2Q9ULI1 1742 aa23.43■■□□□ 1.34
CCDC17-201ENST00000372044 CYP27B1O15528 508 aa23.43■■□□□ 1.34
CCDC17-201ENST00000372044 CANXP27824 592 aaKnown RBP23.43■■□□□ 1.34
CCDC17-201ENST00000372044 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
CCDC17-201ENST00000372044 RLBP1P12271 317 aa23.42■■□□□ 1.34
CCDC17-201ENST00000372044 PHKG2P15735 406 aa23.42■■□□□ 1.34
CCDC17-201ENST00000372044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.42■■□□□ 1.34
CCDC17-201ENST00000372044 SPG7Q9UQ90 795 aa23.42■■□□□ 1.34
CCDC17-201ENST00000372044 ALDH1L2Q3SY69 923 aa23.41■■□□□ 1.34
CCDC17-201ENST00000372044 CACNA1FO60840 1977 aa23.41■■□□□ 1.34
CCDC17-201ENST00000372044 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
CCDC17-201ENST00000372044 NOB1Q9ULX3 412 aaKnown RBP23.39■■□□□ 1.34
CCDC17-201ENST00000372044 PDE3AQ14432 1141 aa23.39■■□□□ 1.33
CCDC17-201ENST00000372044 MRPL50Q8N5N7 158 aaKnown RBP23.39■■□□□ 1.33
CCDC17-201ENST00000372044 CLUAP1Q96AJ1 413 aa23.39■■□□□ 1.33
CCDC17-201ENST00000372044 ZNF428Q96B54 188 aa23.39■■□□□ 1.33
CCDC17-201ENST00000372044 KCNQ3O43525 872 aa23.38■■□□□ 1.33
CCDC17-201ENST00000372044 IL2RBP14784 551 aa23.38■■□□□ 1.33
CCDC17-201ENST00000372044 TEFQ10587 303 aa23.38■■□□□ 1.33
CCDC17-201ENST00000372044 IFNL2Q8IZJ0 200 aa23.38■■□□□ 1.33
CCDC17-201ENST00000372044 TOGARAM1Q9Y4F4 1720 aa23.37■■□□□ 1.33
CCDC17-201ENST00000372044 TRIM27P14373 513 aa23.36■■□□□ 1.33
CCDC17-201ENST00000372044 COG6Q9Y2V7 657 aa23.36■■□□□ 1.33
CCDC17-201ENST00000372044 JCADQ9P266 1359 aa23.36■■□□□ 1.33
CCDC17-201ENST00000372044 ZKSCAN2Q63HK3 967 aa23.36■■□□□ 1.33
CCDC17-201ENST00000372044 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms