RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
SSBP3-203ENST00000371319 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
SSBP3-203ENST00000371319 ABCA3Q99758 1704 aa22.59■■□□□ 1.21
SSBP3-203ENST00000371319 CHL1O00533 1208 aa22.59■■□□□ 1.21
SSBP3-203ENST00000371319 CPDO75976 1380 aa22.58■■□□□ 1.21
SSBP3-203ENST00000371319 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.2
SSBP3-203ENST00000371319 MAP3K5Q99683 1374 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 VAMP4O75379 141 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 ALDH1L2Q3SY69 923 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 TSPYL6Q8N831 410 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 PANK1Q8TE04 598 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 TNNQ9UQP3 1299 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 ERBB3P21860 1342 aa22.57■■□□□ 1.2
SSBP3-203ENST00000371319 GNAT3A8MTJ3 354 aa22.56■■□□□ 1.2
SSBP3-203ENST00000371319 RTF1Q92541 710 aaKnown RBP22.56■■□□□ 1.2
SSBP3-203ENST00000371319 C8orf58Q8NAV2 365 aa22.55■■□□□ 1.2
SSBP3-203ENST00000371319 FAM208AQ9UK61 1670 aaKnown RBP22.55■■□□□ 1.2
SSBP3-203ENST00000371319 RLBP1P12271 317 aa22.54■■□□□ 1.2
SSBP3-203ENST00000371319 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
SSBP3-203ENST00000371319 KIAA0232Q92628 1395 aa22.53■■□□□ 1.2
SSBP3-203ENST00000371319 BRPF1P55201 1214 aaPredicted RBP22.53■■□□□ 1.2
SSBP3-203ENST00000371319 TWISTNBQ3B726 338 aaPredicted RBP22.52■■□□□ 1.2
SSBP3-203ENST00000371319 COG6Q9Y2V7 657 aa22.51■■□□□ 1.19
SSBP3-203ENST00000371319 ROBO1Q9Y6N7 1651 aa22.51■■□□□ 1.19
SSBP3-203ENST00000371319 CHRNA2Q15822 529 aa22.5■■□□□ 1.19
SSBP3-203ENST00000371319 MRPL50Q8N5N7 158 aaKnown RBP22.5■■□□□ 1.19
SSBP3-203ENST00000371319 IL17REQ8NFR9 667 aa22.5■■□□□ 1.19
SSBP3-203ENST00000371319 NOB1Q9ULX3 412 aaKnown RBP22.5■■□□□ 1.19
SSBP3-203ENST00000371319 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
SSBP3-203ENST00000371319 KIF16BQ96L93 1317 aa22.49■■□□□ 1.19
SSBP3-203ENST00000371319 PLEKHO1Q53GL0 409 aaPredicted RBP22.49■■□□□ 1.19
SSBP3-203ENST00000371319 VIRMAQ69YN4 1812 aaKnown RBP22.49■■□□□ 1.19
SSBP3-203ENST00000371319 TRIM27P14373 513 aa22.48■■□□□ 1.19
SSBP3-203ENST00000371319 AMOTQ4VCS5 1084 aa22.48■■□□□ 1.19
SSBP3-203ENST00000371319 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
SSBP3-203ENST00000371319 AHDC1Q5TGY3 1603 aaPredicted RBP22.48■■□□□ 1.19
SSBP3-203ENST00000371319 CEMIPQ8WUJ3 1361 aa22.47■■□□□ 1.19
SSBP3-203ENST00000371319 MS4A1P11836 297 aa22.47■■□□□ 1.19
SSBP3-203ENST00000371319 KRT24Q2M2I5 525 aa22.47■■□□□ 1.19
SSBP3-203ENST00000371319 DZIP1LQ8IYY4 767 aaKnown RBP22.47■■□□□ 1.19
SSBP3-203ENST00000371319 CLUAP1Q96AJ1 413 aa22.47■■□□□ 1.19
SSBP3-203ENST00000371319 TSHZ2Q9NRE2 1034 aa22.47■■□□□ 1.19
SSBP3-203ENST00000371319 MIS18AQ9NYP9 233 aa22.47■■□□□ 1.19
SSBP3-203ENST00000371319 TSPYL4Q9UJ04 414 aa22.46■■□□□ 1.19
SSBP3-203ENST00000371319 KDM2BQ8NHM5 1336 aa22.46■■□□□ 1.19
SSBP3-203ENST00000371319 AKAP4Q5JQC9 854 aa22.46■■□□□ 1.19
SSBP3-203ENST00000371319 ZNF530Q6P9A1 599 aaPredicted RBP22.46■■□□□ 1.19
SSBP3-203ENST00000371319 IPO8O15397 1037 aaKnown RBP22.45■■□□□ 1.18
SSBP3-203ENST00000371319 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
SSBP3-203ENST00000371319 NLRP2Q9NX02 1062 aa22.45■■□□□ 1.18
SSBP3-203ENST00000371319 ADAMTS7Q9UKP4 1686 aa22.44■■□□□ 1.18
SSBP3-203ENST00000371319 MVPQ14764 893 aaKnown RBP22.44■■□□□ 1.18
SSBP3-203ENST00000371319 FTSJ3Q8IY81 847 aaKnown RBP22.43■■□□□ 1.18
SSBP3-203ENST00000371319 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
SSBP3-203ENST00000371319 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
SSBP3-203ENST00000371319 AAMPQ13685 434 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 TAF7Q15545 349 aaPredicted RBP22.42■■□□□ 1.18
SSBP3-203ENST00000371319 LGR6Q9HBX8 967 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 MEGF6O75095 1541 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 OVOS2A0A0G2JMS6 1433 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 CSB-PGBD3P0DP91 1061 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 ARHGAP45Q92619 1136 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 PRDM11Q9NQV5 511 aa22.42■■□□□ 1.18
SSBP3-203ENST00000371319 PLEKHG2Q9H7P9 1386 aa22.41■■□□□ 1.18
SSBP3-203ENST00000371319 COL22A1Q8NFW1 1626 aaPredicted RBP22.41■■□□□ 1.18
SSBP3-203ENST00000371319 PKD1L3Q7Z443 1732 aa22.41■■□□□ 1.18
SSBP3-203ENST00000371319 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
SSBP3-203ENST00000371319 CENPQQ7L2Z9 268 aaPredicted RBP22.4■■□□□ 1.18
SSBP3-203ENST00000371319 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
SSBP3-203ENST00000371319 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
SSBP3-203ENST00000371319 RNMTO43148 476 aaKnown RBP22.39■■□□□ 1.18
SSBP3-203ENST00000371319 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.18
SSBP3-203ENST00000371319 C1orf141Q5JVX7 400 aa22.38■■□□□ 1.17
SSBP3-203ENST00000371319 RAPGEF4Q8WZA2 1011 aa22.38■■□□□ 1.17
SSBP3-203ENST00000371319 TATP17735 454 aaPredicted RBP22.38■■□□□ 1.17
SSBP3-203ENST00000371319 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
SSBP3-203ENST00000371319 MPRIPQ6WCQ1 1025 aa22.37■■□□□ 1.17
SSBP3-203ENST00000371319 SCN11AQ9UI33 1791 aa22.36■■□□□ 1.17
SSBP3-203ENST00000371319 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
SSBP3-203ENST00000371319 ITPRIPQ8IWB1 547 aa22.35■■□□□ 1.17
SSBP3-203ENST00000371319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.176e-7■■□□□ 12.6
SSBP3-203ENST00000371319 DDX19BQ9UMR2 479 aa22.35■■□□□ 1.17
SSBP3-203ENST00000371319 ABCC4O15439 1325 aa22.35■■□□□ 1.17
SSBP3-203ENST00000371319 IGHDP01880 384 aa22.34■■□□□ 1.17
SSBP3-203ENST00000371319 PCDHB15Q9Y5E8 787 aa22.34■■□□□ 1.17
SSBP3-203ENST00000371319 PHLPP1O60346 1717 aa22.34■■□□□ 1.17
SSBP3-203ENST00000371319 SOS1Q07889 1333 aaPredicted RBP22.34■■□□□ 1.17
SSBP3-203ENST00000371319 API5Q9BZZ5 524 aaKnown RBP22.33■■□□□ 1.17
SSBP3-203ENST00000371319 COL16A1Q07092 1604 aaPredicted RBP22.33■■□□□ 1.17
SSBP3-203ENST00000371319 RGS12O14924 1447 aa22.33■■□□□ 1.17
SSBP3-203ENST00000371319 SPG7Q9UQ90 795 aa22.33■■□□□ 1.16
SSBP3-203ENST00000371319 TEFQ10587 303 aa22.32■■□□□ 1.16
SSBP3-203ENST00000371319 COL14A1Q05707 1796 aaKnown RBP22.32■■□□□ 1.16
SSBP3-203ENST00000371319 KDM6AO15550 1401 aaPredicted RBP22.32■■□□□ 1.16
SSBP3-203ENST00000371319 PHKG2P15735 406 aa22.31■■□□□ 1.16
SSBP3-203ENST00000371319 EIF4A1P60842 406 aaKnown RBP22.29■■□□□ 1.16
SSBP3-203ENST00000371319 TOM1L2Q6ZVM7 507 aa22.29■■□□□ 1.16
SSBP3-203ENST00000371319 CACNA1FO60840 1977 aa22.29■■□□□ 1.16
SSBP3-203ENST00000371319 BTBD11A6QL63 1104 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms