RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 NUTM1Q86Y26 1132 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 TCEAL9Q9UHQ7 104 aa20.21■□□□□ 0.83
PTP4A1-201ENST00000370651 ERICH4A6NGS2 130 aa20.2■□□□□ 0.82
PTP4A1-201ENST00000370651 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
PTP4A1-201ENST00000370651 SMTNL1A8MU46 457 aa20.2■□□□□ 0.82
PTP4A1-201ENST00000370651 SKIDA1Q1XH10 827 aa20.2■□□□□ 0.82
PTP4A1-201ENST00000370651 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
PTP4A1-201ENST00000370651 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
PTP4A1-201ENST00000370651 TRIM22Q8IYM9 498 aa20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 SCAND2PQ9GZW5 306 aaPredicted RBP20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 CT47A1Q5JQC4 288 aaPredicted RBP20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 TBC1D9Q6ZT07 1266 aa20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 CCDC191Q8NCU4 936 aa20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 ABCC5O15440 1437 aa20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 XRCC6P12956 609 aaKnown RBP eCLIP20.19■□□□□ 0.826e-6■□□□□ 9.2
PTP4A1-201ENST00000370651 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
PTP4A1-201ENST00000370651 TTC39AQ5SRH9 613 aa20.18■□□□□ 0.82
PTP4A1-201ENST00000370651 TMCO3Q6UWJ1 677 aa20.18■□□□□ 0.82
PTP4A1-201ENST00000370651 KIF1BPQ96EK5 621 aa20.18■□□□□ 0.82
PTP4A1-201ENST00000370651 MYO6Q9UM54 1294 aa20.18■□□□□ 0.82
PTP4A1-201ENST00000370651 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 SFPQP23246 707 aaKnown RBP eCLIP20.17■□□□□ 0.827e-9■■■□□ 15
PTP4A1-201ENST00000370651 DDX11Q96FC9 970 aa20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 SLC52A1Q9NWF4 448 aa20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 KIF18AQ8NI77 898 aa20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 UBE2Q2Q8WVN8 375 aa20.17■□□□□ 0.82
PTP4A1-201ENST00000370651 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
PTP4A1-201ENST00000370651 SH2B1Q9NRF2 756 aaPredicted RBP20.16■□□□□ 0.82
PTP4A1-201ENST00000370651 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
PTP4A1-201ENST00000370651 CFAP100Q494V2 611 aa20.15■□□□□ 0.82
PTP4A1-201ENST00000370651 MTMR7Q9Y216 660 aa20.15■□□□□ 0.82
PTP4A1-201ENST00000370651 ZNF530Q6P9A1 599 aaPredicted RBP20.15■□□□□ 0.82
PTP4A1-201ENST00000370651 PRM3Q9NNZ6 103 aa20.15■□□□□ 0.82
PTP4A1-201ENST00000370651 KIAA0754O94854 1291 aa20.15■□□□□ 0.82
PTP4A1-201ENST00000370651 DYNC1I1O14576 645 aa20.14■□□□□ 0.82
PTP4A1-201ENST00000370651 RAB11FIP3O75154 756 aa20.14■□□□□ 0.82
PTP4A1-201ENST00000370651 CDKL5O76039 1030 aa20.14■□□□□ 0.82
PTP4A1-201ENST00000370651 ANO10Q9NW15 660 aa20.14■□□□□ 0.82
PTP4A1-201ENST00000370651 PODXL2Q9NZ53 605 aa20.14■□□□□ 0.82
PTP4A1-201ENST00000370651 C8orf34Q49A92 452 aa20.14■□□□□ 0.81
PTP4A1-201ENST00000370651 CCDC43Q96MW1 224 aaKnown RBP20.14■□□□□ 0.81
PTP4A1-201ENST00000370651 CTNNA3Q9UI47 895 aa20.14■□□□□ 0.81
PTP4A1-201ENST00000370651 LIMCH1Q9UPQ0 1083 aa20.14■□□□□ 0.81
PTP4A1-201ENST00000370651 CCDC141Q6ZP82 1450 aa20.14■□□□□ 0.81
PTP4A1-201ENST00000370651 GDPD2Q9HCC8 539 aa20.14■□□□□ 0.81
PTP4A1-201ENST00000370651 TNNT1P13805 278 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 STIM1Q13586 685 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 CLIP2Q9UDT6 1046 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 PANK2Q9BZ23 570 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 CCDC181Q5TID7 509 aa20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 CGNQ9P2M7 1197 aaKnown RBP20.13■□□□□ 0.81
PTP4A1-201ENST00000370651 ADCY5O95622 1261 aa20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 CCDC102AQ96A19 550 aa20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 CDK5RAP3Q96JB5 506 aa20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 GOLGA6L10A6NI86 522 aa20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
PTP4A1-201ENST00000370651 CAMSAP2Q08AD1 1489 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 CCDC69A6NI79 296 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 C16orf45Q96MC5 204 aaPredicted RBP20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 DEF6Q9H4E7 631 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 MCM10Q7L590 875 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 LUC7LQ9NQ29 371 aaKnown RBP20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 ARHGAP29Q52LW3 1261 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 CNNM1Q9NRU3 951 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 MIS18AQ9NYP9 233 aa20.11■□□□□ 0.81
PTP4A1-201ENST00000370651 CKAP2LQ8IYA6 745 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 NACAP1Q9BZK3 213 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 ZSCAN12O43309 604 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 UVSSAQ2YD98 709 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 ODF2Q5BJF6 829 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 PRIMPOLQ96LW4 560 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 PCDHB15Q9Y5E8 787 aa20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 EPB41L2O43491 1005 aaKnown RBP20.1■□□□□ 0.81
PTP4A1-201ENST00000370651 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.812e-8■■■□□ 16.5
PTP4A1-201ENST00000370651 RBM33Q96EV2 1170 aaKnown RBP20.09■□□□□ 0.81
PTP4A1-201ENST00000370651 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
PTP4A1-201ENST00000370651 ZMYND15Q9H091 742 aa20.09■□□□□ 0.81
PTP4A1-201ENST00000370651 SLC3A2P08195 630 aaKnown RBP20.09■□□□□ 0.81
PTP4A1-201ENST00000370651 DDX19AQ9NUU7 478 aaKnown RBP20.09■□□□□ 0.81
PTP4A1-201ENST00000370651 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 NEMFO60524 1076 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 PPP4R3BQ5MIZ7 849 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 LRSAM1Q6UWE0 723 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 NOL7Q9UMY1 257 aaKnown RBP20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 MYL6BP14649 208 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 ZSCAN25Q6NSZ9 544 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
PTP4A1-201ENST00000370651 DDX54Q8TDD1 881 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms