RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 EIF4G2P78344 907 aaKnown RBP eCLIP22.33■■□□□ 1.17
VMA21-202ENST00000370361 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
VMA21-202ENST00000370361 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
VMA21-202ENST00000370361 CARD14Q9BXL6 1004 aa22.33■■□□□ 1.17
VMA21-202ENST00000370361 SHANK3Q9BYB0 1731 aa22.32■■□□□ 1.16
VMA21-202ENST00000370361 ANKRD26Q9UPS8 1709 aa22.32■■□□□ 1.16
VMA21-202ENST00000370361 TATP17735 454 aaPredicted RBP22.31■■□□□ 1.16
VMA21-202ENST00000370361 MTFR1LQ9H019 292 aa22.31■■□□□ 1.16
VMA21-202ENST00000370361 DOT1LQ8TEK3 1739 aa22.31■■□□□ 1.16
VMA21-202ENST00000370361 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
VMA21-202ENST00000370361 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
VMA21-202ENST00000370361 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
VMA21-202ENST00000370361 HSP90AB2PQ58FF8 381 aa22.29■■□□□ 1.16
VMA21-202ENST00000370361 QSER1Q2KHR3 1735 aa22.28■■□□□ 1.16
VMA21-202ENST00000370361 NSD2O96028 1365 aa22.27■■□□□ 1.16
VMA21-202ENST00000370361 PLEKHG2Q9H7P9 1386 aa22.27■■□□□ 1.16
VMA21-202ENST00000370361 PRIM1P49642 420 aaKnown RBP22.27■■□□□ 1.16
VMA21-202ENST00000370361 NCAPD2Q15021 1401 aa22.27■■□□□ 1.16
VMA21-202ENST00000370361 SYTL4Q96C24 671 aaPredicted RBP22.27■■□□□ 1.16
VMA21-202ENST00000370361 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.16
VMA21-202ENST00000370361 LY75O60449 1722 aa22.26■■□□□ 1.15
VMA21-202ENST00000370361 ZBTB7AO95365 584 aa22.26■■□□□ 1.15
VMA21-202ENST00000370361 SLC16A10Q8TF71 515 aa22.26■■□□□ 1.15
VMA21-202ENST00000370361 PTGER2P43116 358 aa22.25■■□□□ 1.15
VMA21-202ENST00000370361 LRRC4BQ9NT99 713 aa22.24■■□□□ 1.15
VMA21-202ENST00000370361 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
VMA21-202ENST00000370361 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
VMA21-202ENST00000370361 AKT1S1Q96B36 256 aa22.23■■□□□ 1.15
VMA21-202ENST00000370361 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
VMA21-202ENST00000370361 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
VMA21-202ENST00000370361 MAP2P11137 1827 aaKnown RBP22.22■■□□□ 1.15
VMA21-202ENST00000370361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.22■■□□□ 1.15
VMA21-202ENST00000370361 HSPA5P11021 654 aaKnown RBP22.21■■□□□ 1.15
VMA21-202ENST00000370361 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
VMA21-202ENST00000370361 ZNF827Q17R98 1081 aa22.2■■□□□ 1.14
VMA21-202ENST00000370361 SGIP1Q9BQI5 828 aa22.2■■□□□ 1.14
VMA21-202ENST00000370361 SPG7Q9UQ90 795 aa22.2■■□□□ 1.14
VMA21-202ENST00000370361 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
VMA21-202ENST00000370361 MAP3K5Q99683 1374 aa22.2■■□□□ 1.14
VMA21-202ENST00000370361 POLR3GLQ9BT43 218 aa22.19■■□□□ 1.14
VMA21-202ENST00000370361 POLKQ9UBT6 870 aa22.19■■□□□ 1.14
VMA21-202ENST00000370361 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
VMA21-202ENST00000370361 TFCP2L1Q9NZI6 479 aa22.17■■□□□ 1.14
VMA21-202ENST00000370361 NKX1-1Q15270 411 aaPredicted RBP22.16■■□□□ 1.14
VMA21-202ENST00000370361 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
VMA21-202ENST00000370361 ARXQ96QS3 562 aa22.16■■□□□ 1.14
VMA21-202ENST00000370361 COL24A1Q17RW2 1714 aa22.15■■□□□ 1.14
VMA21-202ENST00000370361 CYP27B1O15528 508 aa22.15■■□□□ 1.14
VMA21-202ENST00000370361 POLD1P28340 1107 aa22.15■■□□□ 1.14
VMA21-202ENST00000370361 PANK3Q9H999 370 aa22.15■■□□□ 1.14
VMA21-202ENST00000370361 PNPLA7Q6ZV29 1317 aa22.14■■□□□ 1.14
VMA21-202ENST00000370361 EYA1Q99502 592 aa22.14■■□□□ 1.13
VMA21-202ENST00000370361 SYT17Q9BSW7 474 aa22.14■■□□□ 1.13
VMA21-202ENST00000370361 FHDC1Q9C0D6 1143 aaPredicted RBP22.13■■□□□ 1.13
VMA21-202ENST00000370361 PALLDQ8WX93 1383 aa22.12■■□□□ 1.13
VMA21-202ENST00000370361 YY1P25490 414 aa22.12■■□□□ 1.13
VMA21-202ENST00000370361 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
VMA21-202ENST00000370361 C5P01031 1676 aa22.11■■□□□ 1.13
VMA21-202ENST00000370361 ITGB4P16144 1822 aa22.1■■□□□ 1.13
VMA21-202ENST00000370361 TUBGCP6Q96RT7 1819 aa22.1■■□□□ 1.13
VMA21-202ENST00000370361 EIF4A2Q14240 407 aaKnown RBP22.1■■□□□ 1.13
VMA21-202ENST00000370361 MPRIPQ6WCQ1 1025 aa22.1■■□□□ 1.13
VMA21-202ENST00000370361 IFNL2Q8IZJ0 200 aa22.1■■□□□ 1.13
VMA21-202ENST00000370361 KNSTRNQ9Y448 316 aa22.1■■□□□ 1.13
VMA21-202ENST00000370361 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
VMA21-202ENST00000370361 TOGARAM1Q9Y4F4 1720 aa22.09■■□□□ 1.13
VMA21-202ENST00000370361 HSP90AB1P08238 724 aaKnown RBP22.07■■□□□ 1.12
VMA21-202ENST00000370361 TNNT2P45379 298 aaPredicted RBP22.07■■□□□ 1.12
VMA21-202ENST00000370361 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
VMA21-202ENST00000370361 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
VMA21-202ENST00000370361 KCNQ4P56696 695 aa22.06■■□□□ 1.12
VMA21-202ENST00000370361 TMOD3Q9NYL9 352 aa22.06■■□□□ 1.12
VMA21-202ENST00000370361 PHKG2P15735 406 aa22.05■■□□□ 1.12
VMA21-202ENST00000370361 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
VMA21-202ENST00000370361 PIGBQ92521 554 aa22.04■■□□□ 1.12
VMA21-202ENST00000370361 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
VMA21-202ENST00000370361 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.12
VMA21-202ENST00000370361 COL23A1Q86Y22 540 aaPredicted RBP22.02■■□□□ 1.12
VMA21-202ENST00000370361 ERVV-2B6SEH9 535 aa22.01■■□□□ 1.11
VMA21-202ENST00000370361 MSH5O43196 834 aa22.01■■□□□ 1.11
VMA21-202ENST00000370361 DCAF5Q96JK2 942 aa22.01■■□□□ 1.11
VMA21-202ENST00000370361 AK7Q96M32 723 aa22.01■■□□□ 1.11
VMA21-202ENST00000370361 LOC102724428A0A0B4J2F2 783 aa22■■□□□ 1.11
VMA21-202ENST00000370361 SIK1P57059 783 aa22■■□□□ 1.11
VMA21-202ENST00000370361 KIF7Q2M1P5 1343 aa21.99■■□□□ 1.11
VMA21-202ENST00000370361 CHD4Q14839 1912 aa21.98■■□□□ 1.11
VMA21-202ENST00000370361 SSFA2P28290 1259 aa21.98■■□□□ 1.11
VMA21-202ENST00000370361 AMER1Q5JTC6 1135 aaPredicted RBP21.98■■□□□ 1.11
VMA21-202ENST00000370361 ZNF831Q5JPB2 1677 aa21.98■■□□□ 1.11
VMA21-202ENST00000370361 KDRP35968 1356 aa21.97■■□□□ 1.11
VMA21-202ENST00000370361 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
VMA21-202ENST00000370361 C1orf141Q5JVX7 400 aa21.95■■□□□ 1.1
VMA21-202ENST00000370361 GPR162Q16538 588 aa21.94■■□□□ 1.1
VMA21-202ENST00000370361 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
VMA21-202ENST00000370361 ATP6V1AP38606 617 aa21.93■■□□□ 1.1
VMA21-202ENST00000370361 KLHL34Q8N239 644 aa21.93■■□□□ 1.1
VMA21-202ENST00000370361 NPC1L1Q9UHC9 1359 aa21.93■■□□□ 1.1
VMA21-202ENST00000370361 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
VMA21-202ENST00000370361 CD2APQ9Y5K6 639 aa21.93■■□□□ 1.1
VMA21-202ENST00000370361 IL13P35225 146 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms