RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 RGPD2P0DJD1 1756 aa25.82■■□□□ 1.72
NPM3-201ENST00000370110 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
NPM3-201ENST00000370110 MAP3K19Q56UN5 1328 aa25.81■■□□□ 1.72
NPM3-201ENST00000370110 SHANK3Q9BYB0 1731 aa25.8■■□□□ 1.72
NPM3-201ENST00000370110 GGNBP2Q9H3C7 697 aa25.8■■□□□ 1.72
NPM3-201ENST00000370110 KNSTRNQ9Y448 316 aa25.8■■□□□ 1.72
NPM3-201ENST00000370110 DOT1LQ8TEK3 1739 aa25.79■■□□□ 1.72
NPM3-201ENST00000370110 HOXC9P31274 260 aa25.78■■□□□ 1.72
NPM3-201ENST00000370110 AKT1S1Q96B36 256 aa25.78■■□□□ 1.72
NPM3-201ENST00000370110 ARXQ96QS3 562 aa25.78■■□□□ 1.72
NPM3-201ENST00000370110 UTRNP46939 3433 aa25.78■■□□□ 1.72
NPM3-201ENST00000370110 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
NPM3-201ENST00000370110 FYB1O15117 783 aa25.77■■□□□ 1.72
NPM3-201ENST00000370110 KCNQ4P56696 695 aa25.77■■□□□ 1.72
NPM3-201ENST00000370110 MEGF6O75095 1541 aa25.77■■□□□ 1.72
NPM3-201ENST00000370110 TUBGCP6Q96RT7 1819 aa25.77■■□□□ 1.72
NPM3-201ENST00000370110 NSD2O96028 1365 aa25.76■■□□□ 1.71
NPM3-201ENST00000370110 QSER1Q2KHR3 1735 aa25.76■■□□□ 1.71
NPM3-201ENST00000370110 CNGB1Q14028 1251 aaPredicted RBP25.74■■□□□ 1.71
NPM3-201ENST00000370110 ZNF784Q8NCA9 323 aaPredicted RBP25.74■■□□□ 1.71
NPM3-201ENST00000370110 MAP3K5Q99683 1374 aa25.73■■□□□ 1.71
NPM3-201ENST00000370110 PRIM1P49642 420 aaKnown RBP25.73■■□□□ 1.71
NPM3-201ENST00000370110 LY75O60449 1722 aa25.73■■□□□ 1.71
NPM3-201ENST00000370110 COL24A1Q17RW2 1714 aa25.72■■□□□ 1.71
NPM3-201ENST00000370110 PNPLA7Q6ZV29 1317 aa25.72■■□□□ 1.71
NPM3-201ENST00000370110 AMPHP49418 695 aa25.72■■□□□ 1.71
NPM3-201ENST00000370110 SYTL4Q96C24 671 aaPredicted RBP25.72■■□□□ 1.71
NPM3-201ENST00000370110 SLC27A3Q5K4L6 730 aa25.71■■□□□ 1.71
NPM3-201ENST00000370110 CHD4Q14839 1912 aa25.71■■□□□ 1.71
NPM3-201ENST00000370110 RRS1Q15050 365 aaKnown RBP25.7■■□□□ 1.7
NPM3-201ENST00000370110 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
NPM3-201ENST00000370110 NBPF6Q5VWK0 638 aa25.68■■□□□ 1.7
NPM3-201ENST00000370110 ZCRB1Q8TBF4 217 aaKnown RBP25.68■■□□□ 1.7
NPM3-201ENST00000370110 NBPF4Q96M43 638 aa25.68■■□□□ 1.7
NPM3-201ENST00000370110 RTL1A6NKG5 1358 aa25.68■■□□□ 1.7
NPM3-201ENST00000370110 DDX10Q13206 875 aaKnown RBP25.67■■□□□ 1.7
NPM3-201ENST00000370110 USHBP1Q8N6Y0 703 aa25.67■■□□□ 1.7
NPM3-201ENST00000370110 KIF20BQ96Q89 1820 aa25.67■■□□□ 1.7
NPM3-201ENST00000370110 TNNT2P45379 298 aaPredicted RBP25.66■■□□□ 1.7
NPM3-201ENST00000370110 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
NPM3-201ENST00000370110 CC2D1BQ5T0F9 858 aaKnown RBP25.65■■□□□ 1.7
NPM3-201ENST00000370110 SLC16A10Q8TF71 515 aa25.65■■□□□ 1.7
NPM3-201ENST00000370110 KLHL34Q8N239 644 aa25.64■■□□□ 1.7
NPM3-201ENST00000370110 TFCP2L1Q9NZI6 479 aa25.64■■□□□ 1.7
NPM3-201ENST00000370110 PER1O15534 1290 aaPredicted RBP25.61■■□□□ 1.69
NPM3-201ENST00000370110 CCNL1Q9UK58 526 aaPredicted RBP25.61■■□□□ 1.69
NPM3-201ENST00000370110 PPM1GO15355 546 aaPredicted RBP25.6■■□□□ 1.69
NPM3-201ENST00000370110 POLD1P28340 1107 aa25.6■■□□□ 1.69
NPM3-201ENST00000370110 NLGN2Q8NFZ4 835 aa25.6■■□□□ 1.69
NPM3-201ENST00000370110 GPR162Q16538 588 aa25.59■■□□□ 1.69
NPM3-201ENST00000370110 HSP90AB2PQ58FF8 381 aa25.59■■□□□ 1.69
NPM3-201ENST00000370110 AMER1Q5JTC6 1135 aaPredicted RBP25.59■■□□□ 1.69
NPM3-201ENST00000370110 INSRP06213 1382 aa25.56■■□□□ 1.68
NPM3-201ENST00000370110 SMG6Q86US8 1419 aaKnown RBP25.56■■□□□ 1.68
NPM3-201ENST00000370110 COL23A1Q86Y22 540 aaPredicted RBP25.56■■□□□ 1.68
NPM3-201ENST00000370110 RAPGEF4Q8WZA2 1011 aa25.56■■□□□ 1.68
NPM3-201ENST00000370110 C5P01031 1676 aa25.55■■□□□ 1.68
NPM3-201ENST00000370110 TOGARAM1Q9Y4F4 1720 aa25.55■■□□□ 1.68
NPM3-201ENST00000370110 GOLGB1Q14789 3259 aaKnown RBP25.55■■□□□ 1.68
NPM3-201ENST00000370110 PELP1Q8IZL8 1130 aaKnown RBP25.54■■□□□ 1.68
NPM3-201ENST00000370110 FLT4P35916 1363 aa25.54■■□□□ 1.68
NPM3-201ENST00000370110 TATP17735 454 aaPredicted RBP25.53■■□□□ 1.68
NPM3-201ENST00000370110 TAF1LQ8IZX4 1826 aa25.52■■□□□ 1.68
NPM3-201ENST00000370110 EMILIN1Q9Y6C2 1016 aa25.52■■□□□ 1.68
NPM3-201ENST00000370110 CYP27B1O15528 508 aa25.51■■□□□ 1.67
NPM3-201ENST00000370110 MSH5O43196 834 aa25.51■■□□□ 1.67
NPM3-201ENST00000370110 MSL1Q68DK7 614 aa25.51■■□□□ 1.67
NPM3-201ENST00000370110 PCDH11XQ9BZA7 1347 aa25.51■■□□□ 1.67
NPM3-201ENST00000370110 PCDH11YQ9BZA8 1340 aa25.51■■□□□ 1.67
NPM3-201ENST00000370110 PALLDQ8WX93 1383 aa25.5■■□□□ 1.67
NPM3-201ENST00000370110 ANKRD26Q9UPS8 1709 aa25.5■■□□□ 1.67
NPM3-201ENST00000370110 ITGB4P16144 1822 aa25.49■■□□□ 1.67
NPM3-201ENST00000370110 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
NPM3-201ENST00000370110 KIF24Q5T7B8 1368 aa25.49■■□□□ 1.67
NPM3-201ENST00000370110 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.675e-9■□□□□ 10.2
NPM3-201ENST00000370110 C1QTNF8P60827 252 aa25.48■■□□□ 1.67
NPM3-201ENST00000370110 NPC1L1Q9UHC9 1359 aa25.47■■□□□ 1.67
NPM3-201ENST00000370110 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
NPM3-201ENST00000370110 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
NPM3-201ENST00000370110 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
NPM3-201ENST00000370110 AMIGO3Q86WK7 504 aa25.46■■□□□ 1.67
NPM3-201ENST00000370110 C4BP0C0L5 1744 aa25.45■■□□□ 1.66
NPM3-201ENST00000370110 SENP3-EIF4A1A0A087X0R7 540 aa25.44■■□□□ 1.66
NPM3-201ENST00000370110 SMIM5Q71RC9 77 aa25.43■■□□□ 1.66
NPM3-201ENST00000370110 MAP2P11137 1827 aaKnown RBP25.41■■□□□ 1.66
NPM3-201ENST00000370110 UBR3Q6ZT12 1888 aa25.4■■□□□ 1.66
NPM3-201ENST00000370110 PIGBQ92521 554 aa25.4■■□□□ 1.66
NPM3-201ENST00000370110 MTHFSP49914 203 aa25.39■■□□□ 1.66
NPM3-201ENST00000370110 NKX1-1Q15270 411 aaPredicted RBP25.37■■□□□ 1.65
NPM3-201ENST00000370110 GIGYF1O75420 1035 aaPredicted RBP25.36■■□□□ 1.65
NPM3-201ENST00000370110 FLAD1Q8NFF5 587 aa25.36■■□□□ 1.65
NPM3-201ENST00000370110 SMARCC1Q92922 1105 aaPredicted RBP25.36■■□□□ 1.65
NPM3-201ENST00000370110 EYA1Q99502 592 aa25.36■■□□□ 1.65
NPM3-201ENST00000370110 GRIN3BO60391 1043 aa25.35■■□□□ 1.65
NPM3-201ENST00000370110 AK7Q96M32 723 aa25.35■■□□□ 1.65
NPM3-201ENST00000370110 CD2APQ9Y5K6 639 aa25.35■■□□□ 1.65
NPM3-201ENST00000370110 PHF14O94880 888 aa25.34■■□□□ 1.65
NPM3-201ENST00000370110 PPP2R1AP30153 589 aa25.34■■□□□ 1.65
NPM3-201ENST00000370110 LINC00116Q8NCU8 138 aa25.34■■□□□ 1.65
NPM3-201ENST00000370110 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms