RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MAP3K5Q99683 1374 aa21.73■■□□□ 1.07
PHGDH-202ENST00000369409 C20orf194Q5TEA3 1177 aa21.73■■□□□ 1.07
PHGDH-202ENST00000369409 RTF1Q92541 710 aaKnown RBP21.73■■□□□ 1.07
PHGDH-202ENST00000369409 MBIPQ9NS73 344 aa21.73■■□□□ 1.07
PHGDH-202ENST00000369409 EXOC6Q8TAG9 804 aa21.73■■□□□ 1.07
PHGDH-202ENST00000369409 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-202ENST00000369409 CRB1P82279 1406 aa21.72■■□□□ 1.07
PHGDH-202ENST00000369409 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
PHGDH-202ENST00000369409 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
PHGDH-202ENST00000369409 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
PHGDH-202ENST00000369409 COL16A1Q07092 1604 aaPredicted RBP21.7■■□□□ 1.07
PHGDH-202ENST00000369409 CRBNQ96SW2 442 aa21.7■■□□□ 1.06
PHGDH-202ENST00000369409 CSB-PGBD3P0DP91 1061 aa21.69■■□□□ 1.06
PHGDH-202ENST00000369409 NLRP2Q9NX02 1062 aa21.69■■□□□ 1.06
PHGDH-202ENST00000369409 HTATSF1O43719 755 aaKnown RBP21.69■■□□□ 1.06
PHGDH-202ENST00000369409 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
PHGDH-202ENST00000369409 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
PHGDH-202ENST00000369409 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
PHGDH-202ENST00000369409 FRAT1Q92837 279 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-202ENST00000369409 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
PHGDH-202ENST00000369409 PLEKHO1Q53GL0 409 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-202ENST00000369409 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-202ENST00000369409 MEGF6O75095 1541 aa21.66■■□□□ 1.06
PHGDH-202ENST00000369409 PKD1L3Q7Z443 1732 aa21.65■■□□□ 1.06
PHGDH-202ENST00000369409 CHL1O00533 1208 aa21.65■■□□□ 1.06
PHGDH-202ENST00000369409 ZNF530Q6P9A1 599 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-202ENST00000369409 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.06
PHGDH-202ENST00000369409 TSPYL6Q8N831 410 aa21.64■■□□□ 1.06
PHGDH-202ENST00000369409 SSH1Q8WYL5 1049 aa21.64■■□□□ 1.06
PHGDH-202ENST00000369409 PARP4Q9UKK3 1724 aaKnown RBP21.64■■□□□ 1.06
PHGDH-202ENST00000369409 COL14A1Q05707 1796 aaKnown RBP21.63■■□□□ 1.05
PHGDH-202ENST00000369409 TOM1O60784 492 aa21.63■■□□□ 1.05
PHGDH-202ENST00000369409 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
PHGDH-202ENST00000369409 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
PHGDH-202ENST00000369409 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
PHGDH-202ENST00000369409 TWISTNBQ3B726 338 aaPredicted RBP21.62■■□□□ 1.05
PHGDH-202ENST00000369409 C8orf58Q8NAV2 365 aa21.62■■□□□ 1.05
PHGDH-202ENST00000369409 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
PHGDH-202ENST00000369409 WDR17Q8IZU2 1322 aa21.62■■□□□ 1.05
PHGDH-202ENST00000369409 ELL2O00472 640 aaPredicted RBP21.62■■□□□ 1.05
PHGDH-202ENST00000369409 AKAP4Q5JQC9 854 aa21.62■■□□□ 1.05
PHGDH-202ENST00000369409 KDM3BQ7LBC6 1761 aa21.61■■□□□ 1.05
PHGDH-202ENST00000369409 VAMP4O75379 141 aa21.61■■□□□ 1.05
PHGDH-202ENST00000369409 MIS18AQ9NYP9 233 aa21.61■■□□□ 1.05
PHGDH-202ENST00000369409 TSPYL4Q9UJ04 414 aa21.61■■□□□ 1.05
PHGDH-202ENST00000369409 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
PHGDH-202ENST00000369409 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
PHGDH-202ENST00000369409 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
PHGDH-202ENST00000369409 ALDH1L2Q3SY69 923 aa21.6■■□□□ 1.05
PHGDH-202ENST00000369409 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
PHGDH-202ENST00000369409 ZNF428Q96B54 188 aa21.6■■□□□ 1.05
PHGDH-202ENST00000369409 TATP17735 454 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-202ENST00000369409 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
PHGDH-202ENST00000369409 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-202ENST00000369409 SCN11AQ9UI33 1791 aa21.59■■□□□ 1.05
PHGDH-202ENST00000369409 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
PHGDH-202ENST00000369409 PANK1Q8TE04 598 aa21.59■■□□□ 1.05
PHGDH-202ENST00000369409 ZKSCAN2Q63HK3 967 aa21.58■■□□□ 1.04
PHGDH-202ENST00000369409 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.04
PHGDH-202ENST00000369409 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
PHGDH-202ENST00000369409 PLCH1Q4KWH8 1693 aa21.57■■□□□ 1.04
PHGDH-202ENST00000369409 KIF16BQ96L93 1317 aa21.57■■□□□ 1.04
PHGDH-202ENST00000369409 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
PHGDH-202ENST00000369409 UBAP1LF5GYI3 381 aa21.57■■□□□ 1.04
PHGDH-202ENST00000369409 LGR6Q9HBX8 967 aa21.57■■□□□ 1.04
PHGDH-202ENST00000369409 MPRIPQ6WCQ1 1025 aa21.56■■□□□ 1.04
PHGDH-202ENST00000369409 STRN4Q9NRL3 753 aa21.56■■□□□ 1.04
PHGDH-202ENST00000369409 RLBP1P12271 317 aa21.55■■□□□ 1.04
PHGDH-202ENST00000369409 TAF7Q15545 349 aaPredicted RBP21.55■■□□□ 1.04
PHGDH-202ENST00000369409 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
PHGDH-202ENST00000369409 NOB1Q9ULX3 412 aaKnown RBP21.54■■□□□ 1.04
PHGDH-202ENST00000369409 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
PHGDH-202ENST00000369409 SHANK3Q9BYB0 1731 aa21.54■■□□□ 1.04
PHGDH-202ENST00000369409 TCERG1O14776 1098 aaKnown RBP21.54■■□□□ 1.04
PHGDH-202ENST00000369409 RNMTO43148 476 aaKnown RBP21.54■■□□□ 1.04
PHGDH-202ENST00000369409 SPG7Q9UQ90 795 aa21.54■■□□□ 1.04
PHGDH-202ENST00000369409 TRIM27P14373 513 aa21.53■■□□□ 1.04
PHGDH-202ENST00000369409 EVA1CP58658 441 aa21.53■■□□□ 1.04
PHGDH-202ENST00000369409 LARP1Q6PKG0 1096 aaKnown RBP21.53■■□□□ 1.04
PHGDH-202ENST00000369409 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
PHGDH-202ENST00000369409 MRPL50Q8N5N7 158 aaKnown RBP21.53■■□□□ 1.04
PHGDH-202ENST00000369409 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.04
PHGDH-202ENST00000369409 TEFQ10587 303 aa21.52■■□□□ 1.04
PHGDH-202ENST00000369409 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
PHGDH-202ENST00000369409 BABAM1Q9NWV8 329 aa21.52■■□□□ 1.04
PHGDH-202ENST00000369409 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
PHGDH-202ENST00000369409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.52■■□□□ 1.04
PHGDH-202ENST00000369409 DZIP1LQ8IYY4 767 aaKnown RBP21.52■■□□□ 1.03
PHGDH-202ENST00000369409 CARD10Q9BWT7 1032 aa21.52■■□□□ 1.03
PHGDH-202ENST00000369409 KDM6AO15550 1401 aaPredicted RBP21.51■■□□□ 1.03
PHGDH-202ENST00000369409 NRAPQ86VF7 1730 aa21.51■■□□□ 1.03
PHGDH-202ENST00000369409 PHKG2P15735 406 aa21.5■■□□□ 1.03
PHGDH-202ENST00000369409 WNK3Q9BYP7 1800 aa21.5■■□□□ 1.03
PHGDH-202ENST00000369409 IPO8O15397 1037 aaKnown RBP21.49■■□□□ 1.03
PHGDH-202ENST00000369409 MS4A1P11836 297 aa21.49■■□□□ 1.03
PHGDH-202ENST00000369409 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
PHGDH-202ENST00000369409 CACNA1FO60840 1977 aa21.47■■□□□ 1.03
PHGDH-202ENST00000369409 CYP27B1O15528 508 aa21.47■■□□□ 1.03
PHGDH-202ENST00000369409 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
PHGDH-202ENST00000369409 MRC1P22897 1456 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms