RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 SPG7Q9UQ90 795 aa33.26■■■□□ 2.91
NSMCE4A-201ENST00000369017 RXRBP28702 533 aa33.23■■■□□ 2.91
NSMCE4A-201ENST00000369017 WNK3Q9BYP7 1800 aa33.23■■■□□ 2.91
NSMCE4A-201ENST00000369017 OVOS2A0A0G2JMS6 1433 aa33.22■■■□□ 2.91
NSMCE4A-201ENST00000369017 FAM98CQ17RN3 349 aaKnown RBP33.22■■■□□ 2.91
NSMCE4A-201ENST00000369017 EXOC5O00471 708 aa33.21■■■□□ 2.91
NSMCE4A-201ENST00000369017 GAS2L2Q8NHY3 880 aa33.21■■■□□ 2.91
NSMCE4A-201ENST00000369017 PLEKHF1Q96S99 279 aa33.21■■■□□ 2.91
NSMCE4A-201ENST00000369017 GLI3P10071 1580 aa33.21■■■□□ 2.91
NSMCE4A-201ENST00000369017 DISP2A7MBM2 1401 aa33.2■■■□□ 2.91
NSMCE4A-201ENST00000369017 A0A0G2JS52 829 aa33.2■■■□□ 2.91
NSMCE4A-201ENST00000369017 ONECUT3O60422 494 aaPredicted RBP33.2■■■□□ 2.91
NSMCE4A-201ENST00000369017 MYT1Q01538 1121 aa33.2■■■□□ 2.91
NSMCE4A-201ENST00000369017 MEGF6O75095 1541 aa33.19■■■□□ 2.9
NSMCE4A-201ENST00000369017 ZCRB1Q8TBF4 217 aaKnown RBP33.19■■■□□ 2.9
NSMCE4A-201ENST00000369017 DDB1Q16531 1140 aa33.18■■■□□ 2.9
NSMCE4A-201ENST00000369017 RGS17Q9UGC6 210 aaPredicted RBP33.18■■■□□ 2.9
NSMCE4A-201ENST00000369017 CCDC146Q8IYE0 955 aa33.17■■■□□ 2.9
NSMCE4A-201ENST00000369017 NGEFQ8N5V2 710 aa33.17■■■□□ 2.9
NSMCE4A-201ENST00000369017 C1orf141Q5JVX7 400 aa33.15■■■□□ 2.9
NSMCE4A-201ENST00000369017 PCDH11XQ9BZA7 1347 aa33.15■■■□□ 2.9
NSMCE4A-201ENST00000369017 PCDH11YQ9BZA8 1340 aa33.15■■■□□ 2.9
NSMCE4A-201ENST00000369017 PKD1L3Q7Z443 1732 aa33.14■■■□□ 2.89
NSMCE4A-201ENST00000369017 TNS2Q63HR2 1409 aa33.12■■■□□ 2.89
NSMCE4A-201ENST00000369017 PHACTR3Q96KR7 559 aa33.12■■■□□ 2.89
NSMCE4A-201ENST00000369017 THSD7AQ9UPZ6 1657 aa33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 HSP90AB1P08238 724 aaKnown RBP33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 LMOD3Q0VAK6 560 aa33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 PDE3BQ13370 1112 aa33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 NFE2L2Q16236 605 aa33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 ZNF530Q6P9A1 599 aaPredicted RBP33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 IFNL2Q8IZJ0 200 aa33.11■■■□□ 2.89
NSMCE4A-201ENST00000369017 MTHFSDQ2M296 383 aaKnown RBP33.1■■■□□ 2.89
NSMCE4A-201ENST00000369017 NCBP3Q53F19 620 aaKnown RBP33.1■■■□□ 2.89
NSMCE4A-201ENST00000369017 AKAP4Q5JQC9 854 aa33.1■■■□□ 2.89
NSMCE4A-201ENST00000369017 POTEAQ6S8J7 498 aa33.1■■■□□ 2.89
NSMCE4A-201ENST00000369017 SEPT12Q8IYM1 358 aa33.1■■■□□ 2.89
NSMCE4A-201ENST00000369017 APAF1O14727 1248 aa33.08■■■□□ 2.89
NSMCE4A-201ENST00000369017 HTATSF1O43719 755 aaKnown RBP33.07■■■□□ 2.88
NSMCE4A-201ENST00000369017 TMPOP42166 694 aaKnown RBP33.07■■■□□ 2.88
NSMCE4A-201ENST00000369017 RTF1Q92541 710 aaKnown RBP33.07■■■□□ 2.88
NSMCE4A-201ENST00000369017 LRRC37A3O60309 1634 aa33.06■■■□□ 2.88
NSMCE4A-201ENST00000369017 DDX54Q8TDD1 881 aaKnown RBP33.06■■■□□ 2.88
NSMCE4A-201ENST00000369017 GNAT3A8MTJ3 354 aa33.05■■■□□ 2.88
NSMCE4A-201ENST00000369017 RIPK4P57078 832 aa33.05■■■□□ 2.88
NSMCE4A-201ENST00000369017 PHKG2P15735 406 aa33.03■■■□□ 2.88
NSMCE4A-201ENST00000369017 MAP3K5Q99683 1374 aa33.03■■■□□ 2.88
NSMCE4A-201ENST00000369017 NEUROD2Q15784 382 aa33■■■□□ 2.87
NSMCE4A-201ENST00000369017 DCAF5Q96JK2 942 aa33■■■□□ 2.87
NSMCE4A-201ENST00000369017 CYP27B1O15528 508 aa32.99■■■□□ 2.87
NSMCE4A-201ENST00000369017 CCDC27Q2M243 656 aa32.99■■■□□ 2.87
NSMCE4A-201ENST00000369017 NKX1-1Q15270 411 aaPredicted RBP32.98■■■□□ 2.87
NSMCE4A-201ENST00000369017 KRT27Q7Z3Y8 459 aa32.98■■■□□ 2.87
NSMCE4A-201ENST00000369017 SHANK3Q9BYB0 1731 aa32.97■■■□□ 2.87
NSMCE4A-201ENST00000369017 CALD1Q05682 793 aaKnown RBP32.97■■■□□ 2.87
NSMCE4A-201ENST00000369017 DLG5Q8TDM6 1919 aa32.95■■■□□ 2.87
NSMCE4A-201ENST00000369017 HNRNPUQ00839 825 aaKnown RBP eCLIP32.95■■■□□ 2.87
NSMCE4A-201ENST00000369017 RRP7AQ9Y3A4 280 aaKnown RBP32.95■■■□□ 2.87
NSMCE4A-201ENST00000369017 RGS12O14924 1447 aa32.94■■■□□ 2.86
NSMCE4A-201ENST00000369017 MARCH10Q8NA82 808 aaPredicted RBP32.93■■■□□ 2.86
NSMCE4A-201ENST00000369017 ERVV-2B6SEH9 535 aa32.9■■■□□ 2.86
NSMCE4A-201ENST00000369017 MPRIPQ6WCQ1 1025 aa32.9■■■□□ 2.86
NSMCE4A-201ENST00000369017 FAM196AQ6ZSG2 479 aa32.9■■■□□ 2.86
NSMCE4A-201ENST00000369017 BCL9O00512 1426 aa32.9■■■□□ 2.86
NSMCE4A-201ENST00000369017 BRWD3Q6RI45 1802 aa32.89■■■□□ 2.86
NSMCE4A-201ENST00000369017 RNMTO43148 476 aaKnown RBP32.88■■■□□ 2.85
NSMCE4A-201ENST00000369017 TEFQ10587 303 aa32.88■■■□□ 2.85
NSMCE4A-201ENST00000369017 TRIM35Q9UPQ4 493 aa32.87■■■□□ 2.85
NSMCE4A-201ENST00000369017 SCN11AQ9UI33 1791 aa32.86■■■□□ 2.85
NSMCE4A-201ENST00000369017 WDR63Q8IWG1 891 aa32.86■■■□□ 2.85
NSMCE4A-201ENST00000369017 WWC1Q8IX03 1113 aa32.86■■■□□ 2.85
NSMCE4A-201ENST00000369017 SALL2Q9Y467 1007 aaPredicted RBP32.86■■■□□ 2.85
NSMCE4A-201ENST00000369017 CEMIPQ8WUJ3 1361 aa32.85■■■□□ 2.85
NSMCE4A-201ENST00000369017 MCM10Q7L590 875 aa32.85■■■□□ 2.85
NSMCE4A-201ENST00000369017 ADAMTS7Q9UKP4 1686 aa32.85■■■□□ 2.85
NSMCE4A-201ENST00000369017 CABP4P57796 275 aa32.84■■■□□ 2.85
NSMCE4A-201ENST00000369017 IL17REQ8NFR9 667 aa32.84■■■□□ 2.85
NSMCE4A-201ENST00000369017 VIRMAQ69YN4 1812 aaKnown RBP32.82■■■□□ 2.84
NSMCE4A-201ENST00000369017 LGR6Q9HBX8 967 aa32.82■■■□□ 2.84
NSMCE4A-201ENST00000369017 KDM6AO15550 1401 aaPredicted RBP32.82■■■□□ 2.84
NSMCE4A-201ENST00000369017 IL16Q14005 1332 aa32.8■■■□□ 2.84
NSMCE4A-201ENST00000369017 ZBED9Q6R2W3 1325 aa32.8■■■□□ 2.84
NSMCE4A-201ENST00000369017 DCTN1Q14203 1278 aa32.8■■■□□ 2.84
NSMCE4A-201ENST00000369017 SLC52A2Q9HAB3 445 aa32.8■■■□□ 2.84
NSMCE4A-201ENST00000369017 BABAM1Q9NWV8 329 aa32.8■■■□□ 2.84
NSMCE4A-201ENST00000369017 TMOD3Q9NYL9 352 aa32.8■■■□□ 2.84
NSMCE4A-201ENST00000369017 TAF7Q15545 349 aaPredicted RBP32.79■■■□□ 2.84
NSMCE4A-201ENST00000369017 SENP3-EIF4A1A0A087X0R7 540 aa32.77■■■□□ 2.84
NSMCE4A-201ENST00000369017 SYTL4Q96C24 671 aaPredicted RBP32.77■■■□□ 2.84
NSMCE4A-201ENST00000369017 MRC1P22897 1456 aa32.77■■■□□ 2.84
NSMCE4A-201ENST00000369017 DOT1LQ8TEK3 1739 aa32.77■■■□□ 2.84
NSMCE4A-201ENST00000369017 GNAI1P63096 354 aa32.76■■■□□ 2.83
NSMCE4A-201ENST00000369017 GOLGA2Q08379 1002 aa32.76■■■□□ 2.83
NSMCE4A-201ENST00000369017 PRIM1P49642 420 aaKnown RBP32.75■■■□□ 2.83
NSMCE4A-201ENST00000369017 NFATC2IPQ8NCF5 419 aa32.75■■■□□ 2.83
NSMCE4A-201ENST00000369017 YTHDC1Q96MU7 727 aaKnown RBP32.75■■■□□ 2.83
NSMCE4A-201ENST00000369017 ZNF521Q96K83 1311 aa32.75■■■□□ 2.83
NSMCE4A-201ENST00000369017 CFAP44Q96MT7 982 aa32.74■■■□□ 2.83
NSMCE4A-201ENST00000369017 IFT57Q9NWB7 429 aa32.74■■■□□ 2.83
NSMCE4A-201ENST00000369017 KAT6BQ8WYB5 2073 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms