RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
SNX27-201ENST00000368838 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
SNX27-201ENST00000368838 BTAF1O14981 1849 aa11.97□□□□□ -0.49
SNX27-201ENST00000368838 CASZ1Q86V15 1759 aa11.96□□□□□ -0.49
SNX27-201ENST00000368838 RGL2O15211 777 aa11.96□□□□□ -0.49
SNX27-201ENST00000368838 KCNH5Q8NCM2 988 aa11.96□□□□□ -0.49
SNX27-201ENST00000368838 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
SNX27-201ENST00000368838 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
SNX27-201ENST00000368838 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
SNX27-201ENST00000368838 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
SNX27-201ENST00000368838 CARD10Q9BWT7 1032 aa11.93□□□□□ -0.5
SNX27-201ENST00000368838 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
SNX27-201ENST00000368838 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
SNX27-201ENST00000368838 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
SNX27-201ENST00000368838 MYOM1P52179 1685 aa11.93□□□□□ -0.5
SNX27-201ENST00000368838 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
SNX27-201ENST00000368838 INSRP06213 1382 aa11.93□□□□□ -0.5
SNX27-201ENST00000368838 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
SNX27-201ENST00000368838 KIF20BQ96Q89 1820 aa11.92□□□□□ -0.5
SNX27-201ENST00000368838 FAM208AQ9UK61 1670 aaKnown RBP11.92□□□□□ -0.5
SNX27-201ENST00000368838 ABCC6O95255 1503 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 EXOC5O00471 708 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 KCNQ2O43526 872 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 HDGFL2Q7Z4V5 671 aaPredicted RBP11.91□□□□□ -0.5
SNX27-201ENST00000368838 LTV1Q96GA3 475 aaPredicted RBP11.91□□□□□ -0.5
SNX27-201ENST00000368838 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
SNX27-201ENST00000368838 PANK3Q9H999 370 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
SNX27-201ENST00000368838 USP31Q70CQ4 1352 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
SNX27-201ENST00000368838 FBLN1P23142 703 aa11.9□□□□□ -0.5
SNX27-201ENST00000368838 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
SNX27-201ENST00000368838 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
SNX27-201ENST00000368838 NSD2O96028 1365 aa11.9□□□□□ -0.5
SNX27-201ENST00000368838 ANKRD36BQ8N2N9 1353 aa11.9□□□□□ -0.5
SNX27-201ENST00000368838 TUBGCP6Q96RT7 1819 aa11.9□□□□□ -0.5
SNX27-201ENST00000368838 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
SNX27-201ENST00000368838 EDC4Q6P2E9 1401 aaKnown RBP11.9□□□□□ -0.5
SNX27-201ENST00000368838 ERBB3P21860 1342 aa11.9□□□□□ -0.5
SNX27-201ENST00000368838 PLSCR1O15162 318 aa11.89□□□□□ -0.51
SNX27-201ENST00000368838 ANKRD24Q8TF21 1146 aa11.89□□□□□ -0.51
SNX27-201ENST00000368838 SPON1Q9HCB6 807 aa11.89□□□□□ -0.51
SNX27-201ENST00000368838 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
SNX27-201ENST00000368838 TERF2IPQ9NYB0 399 aa11.88□□□□□ -0.51
SNX27-201ENST00000368838 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
SNX27-201ENST00000368838 TXNRD1Q16881 649 aa11.87□□□□□ -0.51
SNX27-201ENST00000368838 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
SNX27-201ENST00000368838 KNSTRNQ9Y448 316 aa11.87□□□□□ -0.51
SNX27-201ENST00000368838 IL2RBP14784 551 aa11.86□□□□□ -0.51
SNX27-201ENST00000368838 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
SNX27-201ENST00000368838 BCL9O00512 1426 aa11.86□□□□□ -0.51
SNX27-201ENST00000368838 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
SNX27-201ENST00000368838 PAPPAQ13219 1627 aa11.85□□□□□ -0.51
SNX27-201ENST00000368838 POTEHQ6S545 545 aa11.85□□□□□ -0.51
SNX27-201ENST00000368838 DDX54Q8TDD1 881 aaKnown RBP11.85□□□□□ -0.51
SNX27-201ENST00000368838 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
SNX27-201ENST00000368838 STK32BQ9NY57 414 aa11.85□□□□□ -0.51
SNX27-201ENST00000368838 MAP2P11137 1827 aaKnown RBP11.85□□□□□ -0.51
SNX27-201ENST00000368838 LY75O60449 1722 aa11.84□□□□□ -0.51
SNX27-201ENST00000368838 CHD4Q14839 1912 aa11.84□□□□□ -0.51
SNX27-201ENST00000368838 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
SNX27-201ENST00000368838 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
SNX27-201ENST00000368838 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
SNX27-201ENST00000368838 ITGB4P16144 1822 aa11.83□□□□□ -0.52
SNX27-201ENST00000368838 KCNQ4P56696 695 aa11.83□□□□□ -0.52
SNX27-201ENST00000368838 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
SNX27-201ENST00000368838 IP6K1Q92551 441 aa11.83□□□□□ -0.52
SNX27-201ENST00000368838 COG3Q96JB2 828 aa11.83□□□□□ -0.52
SNX27-201ENST00000368838 CGNL1Q0VF96 1302 aa11.82□□□□□ -0.52
SNX27-201ENST00000368838 QSER1Q2KHR3 1735 aa11.82□□□□□ -0.52
SNX27-201ENST00000368838 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
SNX27-201ENST00000368838 AMPHP49418 695 aa11.82□□□□□ -0.52
SNX27-201ENST00000368838 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
SNX27-201ENST00000368838 POLR3GLQ9BT43 218 aa11.82□□□□□ -0.52
SNX27-201ENST00000368838 GGNBP2Q9H3C7 697 aa11.82□□□□□ -0.52
SNX27-201ENST00000368838 MEGF6O75095 1541 aa11.81□□□□□ -0.52
SNX27-201ENST00000368838 YY1P25490 414 aa11.81□□□□□ -0.52
SNX27-201ENST00000368838 HOXC9P31274 260 aa11.81□□□□□ -0.52
SNX27-201ENST00000368838 PTGER2P43116 358 aa11.81□□□□□ -0.52
SNX27-201ENST00000368838 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
SNX27-201ENST00000368838 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
SNX27-201ENST00000368838 SYTL4Q96C24 671 aaPredicted RBP11.81□□□□□ -0.52
SNX27-201ENST00000368838 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
SNX27-201ENST00000368838 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
SNX27-201ENST00000368838 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
SNX27-201ENST00000368838 MRS2Q9HD23 443 aa11.79□□□□□ -0.52
SNX27-201ENST00000368838 NSD3Q9BZ95 1437 aa11.79□□□□□ -0.52
SNX27-201ENST00000368838 FYB1O15117 783 aa11.78□□□□□ -0.52
SNX27-201ENST00000368838 C5P01031 1676 aa11.78□□□□□ -0.52
SNX27-201ENST00000368838 DSG3P32926 999 aa11.78□□□□□ -0.52
SNX27-201ENST00000368838 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
SNX27-201ENST00000368838 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
SNX27-201ENST00000368838 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
SNX27-201ENST00000368838 PPP2R1AP30153 589 aa11.77□□□□□ -0.53
SNX27-201ENST00000368838 NBPF6Q5VWK0 638 aa11.77□□□□□ -0.53
SNX27-201ENST00000368838 NBPF4Q96M43 638 aa11.77□□□□□ -0.53
SNX27-201ENST00000368838 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
SNX27-201ENST00000368838 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms