RNA–Protein interactions for RNA: ENST00000368789.1

LCE3E-201, Transcript of late cornified envelope 3E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCE3E, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3E-201ENST00000368789 ZNF827Q17R98 1081 aa22.1■■□□□ 1.13
LCE3E-201ENST00000368789 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
LCE3E-201ENST00000368789 ZCRB1Q8TBF4 217 aaKnown RBP22.09■■□□□ 1.13
LCE3E-201ENST00000368789 NSD2O96028 1365 aa22.09■■□□□ 1.13
LCE3E-201ENST00000368789 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.13
LCE3E-201ENST00000368789 AKT1S1Q96B36 256 aa22.08■■□□□ 1.13
LCE3E-201ENST00000368789 FHDC1Q9C0D6 1143 aaPredicted RBP22.08■■□□□ 1.13
LCE3E-201ENST00000368789 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
LCE3E-201ENST00000368789 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
LCE3E-201ENST00000368789 PRIM1P49642 420 aaKnown RBP22.07■■□□□ 1.12
LCE3E-201ENST00000368789 NBPF6Q5VWK0 638 aa22.07■■□□□ 1.12
LCE3E-201ENST00000368789 NBPF4Q96M43 638 aa22.07■■□□□ 1.12
LCE3E-201ENST00000368789 SYT17Q9BSW7 474 aa22.07■■□□□ 1.12
LCE3E-201ENST00000368789 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
LCE3E-201ENST00000368789 SYTL4Q96C24 671 aaPredicted RBP22.06■■□□□ 1.12
LCE3E-201ENST00000368789 INSRP06213 1382 aa22.06■■□□□ 1.12
LCE3E-201ENST00000368789 FLT4P35916 1363 aa22.05■■□□□ 1.12
LCE3E-201ENST00000368789 MAP3K5Q99683 1374 aa22.05■■□□□ 1.12
LCE3E-201ENST00000368789 ARXQ96QS3 562 aa22.04■■□□□ 1.12
LCE3E-201ENST00000368789 UTRNP46939 3433 aa22.03■■□□□ 1.12
LCE3E-201ENST00000368789 USHBP1Q8N6Y0 703 aa22.03■■□□□ 1.12
LCE3E-201ENST00000368789 SLC16A10Q8TF71 515 aa22.03■■□□□ 1.12
LCE3E-201ENST00000368789 RAPGEF4Q8WZA2 1011 aa22.03■■□□□ 1.12
LCE3E-201ENST00000368789 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
LCE3E-201ENST00000368789 ANKRD26Q9UPS8 1709 aa22.03■■□□□ 1.12
LCE3E-201ENST00000368789 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
LCE3E-201ENST00000368789 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
LCE3E-201ENST00000368789 PNPLA7Q6ZV29 1317 aa22.02■■□□□ 1.12
LCE3E-201ENST00000368789 CARD14Q9BXL6 1004 aa22.01■■□□□ 1.11
LCE3E-201ENST00000368789 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
LCE3E-201ENST00000368789 CHD4Q14839 1912 aa22■■□□□ 1.11
LCE3E-201ENST00000368789 KCNQ4P56696 695 aa21.99■■□□□ 1.11
LCE3E-201ENST00000368789 PKD1L3Q7Z443 1732 aa21.99■■□□□ 1.11
LCE3E-201ENST00000368789 PCDH11XQ9BZA7 1347 aa21.99■■□□□ 1.11
LCE3E-201ENST00000368789 PCDH11YQ9BZA8 1340 aa21.99■■□□□ 1.11
LCE3E-201ENST00000368789 TFCP2L1Q9NZI6 479 aa21.98■■□□□ 1.11
LCE3E-201ENST00000368789 CCNL1Q9UK58 526 aaPredicted RBP21.98■■□□□ 1.11
LCE3E-201ENST00000368789 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
LCE3E-201ENST00000368789 C5P01031 1676 aa21.97■■□□□ 1.11
LCE3E-201ENST00000368789 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
LCE3E-201ENST00000368789 TOGARAM1Q9Y4F4 1720 aa21.96■■□□□ 1.11
LCE3E-201ENST00000368789 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
LCE3E-201ENST00000368789 POLD1P28340 1107 aa21.95■■□□□ 1.1
LCE3E-201ENST00000368789 EMILIN1Q9Y6C2 1016 aa21.95■■□□□ 1.1
LCE3E-201ENST00000368789 ITGB4P16144 1822 aa21.94■■□□□ 1.1
LCE3E-201ENST00000368789 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
LCE3E-201ENST00000368789 CYP27B1O15528 508 aa21.92■■□□□ 1.1
LCE3E-201ENST00000368789 PALLDQ8WX93 1383 aa21.9■■□□□ 1.1
LCE3E-201ENST00000368789 WASHC2AQ641Q2 1341 aa21.9■■□□□ 1.1
LCE3E-201ENST00000368789 HMGB2P26583 209 aaKnown RBP21.89■■□□□ 1.09
LCE3E-201ENST00000368789 PPM1GO15355 546 aaPredicted RBP21.88■■□□□ 1.09
LCE3E-201ENST00000368789 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
LCE3E-201ENST00000368789 COL23A1Q86Y22 540 aaPredicted RBP21.88■■□□□ 1.09
LCE3E-201ENST00000368789 ZNF784Q8NCA9 323 aaPredicted RBP21.88■■□□□ 1.09
LCE3E-201ENST00000368789 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
LCE3E-201ENST00000368789 C4BP0C0L5 1744 aa21.86■■□□□ 1.09
LCE3E-201ENST00000368789 NKX1-1Q15270 411 aaPredicted RBP21.86■■□□□ 1.09
LCE3E-201ENST00000368789 GOLGB1Q14789 3259 aaKnown RBP21.85■■□□□ 1.09
LCE3E-201ENST00000368789 MSH5O43196 834 aa21.85■■□□□ 1.09
LCE3E-201ENST00000368789 GPR162Q16538 588 aa21.85■■□□□ 1.09
LCE3E-201ENST00000368789 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
LCE3E-201ENST00000368789 SPG7Q9UQ90 795 aa21.85■■□□□ 1.09
LCE3E-201ENST00000368789 FLAD1Q8NFF5 587 aa21.84■■□□□ 1.09
LCE3E-201ENST00000368789 EYA1Q99502 592 aa21.84■■□□□ 1.09
LCE3E-201ENST00000368789 PCGF6Q9BYE7 350 aa21.84■■□□□ 1.09
LCE3E-201ENST00000368789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.84■■□□□ 1.09
LCE3E-201ENST00000368789 POLKQ9UBT6 870 aa21.84■■□□□ 1.09
LCE3E-201ENST00000368789 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.08
LCE3E-201ENST00000368789 NLGN2Q8NFZ4 835 aa21.82■■□□□ 1.08
LCE3E-201ENST00000368789 PIGBQ92521 554 aa21.82■■□□□ 1.08
LCE3E-201ENST00000368789 PLEKHG2Q9H7P9 1386 aa21.82■■□□□ 1.08
LCE3E-201ENST00000368789 POLR3GLQ9BT43 218 aa21.81■■□□□ 1.08
LCE3E-201ENST00000368789 MSL1Q68DK7 614 aa21.8■■□□□ 1.08
LCE3E-201ENST00000368789 EIF4G2P78344 907 aaKnown RBP eCLIP21.79■■□□□ 1.08
LCE3E-201ENST00000368789 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
LCE3E-201ENST00000368789 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
LCE3E-201ENST00000368789 AK7Q96M32 723 aa21.78■■□□□ 1.08
LCE3E-201ENST00000368789 PHKG2P15735 406 aa21.77■■□□□ 1.08
LCE3E-201ENST00000368789 IFNL2Q8IZJ0 200 aa21.77■■□□□ 1.08
LCE3E-201ENST00000368789 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
LCE3E-201ENST00000368789 TNNT2P45379 298 aaPredicted RBP21.76■■□□□ 1.07
LCE3E-201ENST00000368789 TMOD3Q9NYL9 352 aa21.76■■□□□ 1.07
LCE3E-201ENST00000368789 LOC102724428A0A0B4J2F2 783 aa21.75■■□□□ 1.07
LCE3E-201ENST00000368789 SIK1P57059 783 aa21.75■■□□□ 1.07
LCE3E-201ENST00000368789 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
LCE3E-201ENST00000368789 AMIGO3Q86WK7 504 aa21.74■■□□□ 1.07
LCE3E-201ENST00000368789 CD2APQ9Y5K6 639 aa21.74■■□□□ 1.07
LCE3E-201ENST00000368789 GRIN3BO60391 1043 aa21.73■■□□□ 1.07
LCE3E-201ENST00000368789 YBX3P16989 372 aaKnown RBP eCLIP21.73■■□□□ 1.07
LCE3E-201ENST00000368789 SSFA2P28290 1259 aa21.73■■□□□ 1.07
LCE3E-201ENST00000368789 PANK3Q9H999 370 aa21.73■■□□□ 1.07
LCE3E-201ENST00000368789 ZNF831Q5JPB2 1677 aa21.72■■□□□ 1.07
LCE3E-201ENST00000368789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.72■■□□□ 1.07
LCE3E-201ENST00000368789 LINC00116Q8NCU8 138 aa21.72■■□□□ 1.07
LCE3E-201ENST00000368789 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
LCE3E-201ENST00000368789 PHF14O94880 888 aa21.71■■□□□ 1.07
LCE3E-201ENST00000368789 ITPK1Q13572 414 aa21.69■■□□□ 1.06
LCE3E-201ENST00000368789 ATG3Q9NT62 314 aa21.69■■□□□ 1.06
LCE3E-201ENST00000368789 KDRP35968 1356 aa21.69■■□□□ 1.06
LCE3E-201ENST00000368789 ATP6V1AP38606 617 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms