RNA–Protein interactions for RNA: ENST00000368787.3

LCE3D-201, Transcript of late cornified envelope 3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCE3D, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3D-201ENST00000368787 MEGF6O75095 1541 aa25.68■■□□□ 1.7
LCE3D-201ENST00000368787 TATP17735 454 aaPredicted RBP25.65■■□□□ 1.7
LCE3D-201ENST00000368787 HSP90AB2PQ58FF8 381 aa25.65■■□□□ 1.7
LCE3D-201ENST00000368787 POLR3GLQ9BT43 218 aa25.65■■□□□ 1.7
LCE3D-201ENST00000368787 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
LCE3D-201ENST00000368787 SYTL4Q96C24 671 aaPredicted RBP25.64■■□□□ 1.7
LCE3D-201ENST00000368787 DOT1LQ8TEK3 1739 aa25.63■■□□□ 1.69
LCE3D-201ENST00000368787 SHANK3Q9BYB0 1731 aa25.63■■□□□ 1.69
LCE3D-201ENST00000368787 USHBP1Q8N6Y0 703 aa25.62■■□□□ 1.69
LCE3D-201ENST00000368787 PAPPAQ13219 1627 aa25.62■■□□□ 1.69
LCE3D-201ENST00000368787 DCAF8L1A6NGE4 600 aa25.61■■□□□ 1.69
LCE3D-201ENST00000368787 ZBTB7AO95365 584 aa25.61■■□□□ 1.69
LCE3D-201ENST00000368787 PRIM1P49642 420 aaKnown RBP25.61■■□□□ 1.69
LCE3D-201ENST00000368787 EMILIN1Q9Y6C2 1016 aa25.61■■□□□ 1.69
LCE3D-201ENST00000368787 PDGFDQ9GZP0 370 aaPredicted RBP25.6■■□□□ 1.69
LCE3D-201ENST00000368787 MTFR1LQ9H019 292 aa25.6■■□□□ 1.69
LCE3D-201ENST00000368787 PCDH11XQ9BZA7 1347 aa25.6■■□□□ 1.69
LCE3D-201ENST00000368787 PCDH11YQ9BZA8 1340 aa25.6■■□□□ 1.69
LCE3D-201ENST00000368787 PPM1GO15355 546 aaPredicted RBP25.59■■□□□ 1.69
LCE3D-201ENST00000368787 HSPA5P11021 654 aaKnown RBP25.59■■□□□ 1.69
LCE3D-201ENST00000368787 ANKRD26Q9UPS8 1709 aa25.59■■□□□ 1.69
LCE3D-201ENST00000368787 MAP2P11137 1827 aaKnown RBP25.58■■□□□ 1.68
LCE3D-201ENST00000368787 LRRC4BQ9NT99 713 aa25.57■■□□□ 1.68
LCE3D-201ENST00000368787 WASHC2AQ641Q2 1341 aa25.57■■□□□ 1.68
LCE3D-201ENST00000368787 ATF5Q9Y2D1 282 aaPredicted RBP25.56■■□□□ 1.68
LCE3D-201ENST00000368787 HMGB2P26583 209 aaKnown RBP25.54■■□□□ 1.68
LCE3D-201ENST00000368787 PTGER2P43116 358 aa25.54■■□□□ 1.68
LCE3D-201ENST00000368787 NSD2O96028 1365 aa25.54■■□□□ 1.68
LCE3D-201ENST00000368787 LY75O60449 1722 aa25.54■■□□□ 1.68
LCE3D-201ENST00000368787 ZNF827Q17R98 1081 aa25.53■■□□□ 1.68
LCE3D-201ENST00000368787 NCAPD2Q15021 1401 aa25.52■■□□□ 1.68
LCE3D-201ENST00000368787 QSER1Q2KHR3 1735 aa25.51■■□□□ 1.68
LCE3D-201ENST00000368787 AKT1S1Q96B36 256 aa25.51■■□□□ 1.67
LCE3D-201ENST00000368787 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
LCE3D-201ENST00000368787 PKD1L3Q7Z443 1732 aa25.5■■□□□ 1.67
LCE3D-201ENST00000368787 SLC16A10Q8TF71 515 aa25.5■■□□□ 1.67
LCE3D-201ENST00000368787 CCNL1Q9UK58 526 aaPredicted RBP25.5■■□□□ 1.67
LCE3D-201ENST00000368787 PANK3Q9H999 370 aa25.49■■□□□ 1.67
LCE3D-201ENST00000368787 TFCP2L1Q9NZI6 479 aa25.49■■□□□ 1.67
LCE3D-201ENST00000368787 SPG7Q9UQ90 795 aa25.49■■□□□ 1.67
LCE3D-201ENST00000368787 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.47■■□□□ 1.67
LCE3D-201ENST00000368787 CYP27B1O15528 508 aa25.46■■□□□ 1.67
LCE3D-201ENST00000368787 TNNT2P45379 298 aaPredicted RBP25.46■■□□□ 1.67
LCE3D-201ENST00000368787 EYA1Q99502 592 aa25.46■■□□□ 1.67
LCE3D-201ENST00000368787 SGIP1Q9BQI5 828 aa25.46■■□□□ 1.67
LCE3D-201ENST00000368787 PLEKHG2Q9H7P9 1386 aa25.44■■□□□ 1.66
LCE3D-201ENST00000368787 KCNQ4P56696 695 aa25.44■■□□□ 1.66
LCE3D-201ENST00000368787 ARXQ96QS3 562 aa25.44■■□□□ 1.66
LCE3D-201ENST00000368787 PNPLA7Q6ZV29 1317 aa25.43■■□□□ 1.66
LCE3D-201ENST00000368787 MPRIPQ6WCQ1 1025 aa25.43■■□□□ 1.66
LCE3D-201ENST00000368787 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
LCE3D-201ENST00000368787 FHDC1Q9C0D6 1143 aaPredicted RBP25.43■■□□□ 1.66
LCE3D-201ENST00000368787 POLD1P28340 1107 aa25.42■■□□□ 1.66
LCE3D-201ENST00000368787 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
LCE3D-201ENST00000368787 KNSTRNQ9Y448 316 aa25.42■■□□□ 1.66
LCE3D-201ENST00000368787 PALLDQ8WX93 1383 aa25.42■■□□□ 1.66
LCE3D-201ENST00000368787 ITGB4P16144 1822 aa25.42■■□□□ 1.66
LCE3D-201ENST00000368787 EIF4A2Q14240 407 aaKnown RBP25.41■■□□□ 1.66
LCE3D-201ENST00000368787 SYT17Q9BSW7 474 aa25.41■■□□□ 1.66
LCE3D-201ENST00000368787 TUBGCP6Q96RT7 1819 aa25.41■■□□□ 1.66
LCE3D-201ENST00000368787 YY1P25490 414 aa25.4■■□□□ 1.66
LCE3D-201ENST00000368787 MORC1Q86VD1 984 aa25.4■■□□□ 1.66
LCE3D-201ENST00000368787 MAP3K5Q99683 1374 aa25.4■■□□□ 1.66
LCE3D-201ENST00000368787 TOGARAM1Q9Y4F4 1720 aa25.39■■□□□ 1.65
LCE3D-201ENST00000368787 IFNL2Q8IZJ0 200 aa25.38■■□□□ 1.65
LCE3D-201ENST00000368787 C5P01031 1676 aa25.38■■□□□ 1.65
LCE3D-201ENST00000368787 IGSF1Q8N6C5 1336 aa25.37■■□□□ 1.65
LCE3D-201ENST00000368787 FLAD1Q8NFF5 587 aa25.36■■□□□ 1.65
LCE3D-201ENST00000368787 COL24A1Q17RW2 1714 aa25.36■■□□□ 1.65
LCE3D-201ENST00000368787 MSH5O43196 834 aa25.35■■□□□ 1.65
LCE3D-201ENST00000368787 TMOD3Q9NYL9 352 aa25.35■■□□□ 1.65
LCE3D-201ENST00000368787 TAF1LQ8IZX4 1826 aa25.35■■□□□ 1.65
LCE3D-201ENST00000368787 PHKG2P15735 406 aa25.34■■□□□ 1.65
LCE3D-201ENST00000368787 PIGBQ92521 554 aa25.34■■□□□ 1.65
LCE3D-201ENST00000368787 HSP90AB1P08238 724 aaKnown RBP25.31■■□□□ 1.64
LCE3D-201ENST00000368787 PLEKHO1Q53GL0 409 aaPredicted RBP25.31■■□□□ 1.64
LCE3D-201ENST00000368787 KIF7Q2M1P5 1343 aa25.31■■□□□ 1.64
LCE3D-201ENST00000368787 COL23A1Q86Y22 540 aaPredicted RBP25.3■■□□□ 1.64
LCE3D-201ENST00000368787 AK7Q96M32 723 aa25.3■■□□□ 1.64
LCE3D-201ENST00000368787 AMOTQ4VCS5 1084 aa25.29■■□□□ 1.64
LCE3D-201ENST00000368787 KLHL34Q8N239 644 aa25.29■■□□□ 1.64
LCE3D-201ENST00000368787 C4BP0C0L5 1744 aa25.29■■□□□ 1.64
LCE3D-201ENST00000368787 LOC102724428A0A0B4J2F2 783 aa25.27■■□□□ 1.64
LCE3D-201ENST00000368787 SIK1P57059 783 aa25.27■■□□□ 1.64
LCE3D-201ENST00000368787 AMER1Q5JTC6 1135 aaPredicted RBP25.26■■□□□ 1.63
LCE3D-201ENST00000368787 DCAF5Q96JK2 942 aa25.26■■□□□ 1.63
LCE3D-201ENST00000368787 ERVV-2B6SEH9 535 aa25.25■■□□□ 1.63
LCE3D-201ENST00000368787 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
LCE3D-201ENST00000368787 CHD4Q14839 1912 aa25.24■■□□□ 1.63
LCE3D-201ENST00000368787 ASAP1Q9ULH1 1129 aa25.23■■□□□ 1.63
LCE3D-201ENST00000368787 GPR162Q16538 588 aa25.22■■□□□ 1.63
LCE3D-201ENST00000368787 C1orf141Q5JVX7 400 aa25.22■■□□□ 1.63
LCE3D-201ENST00000368787 UBR3Q6ZT12 1888 aa25.21■■□□□ 1.63
LCE3D-201ENST00000368787 SSFA2P28290 1259 aa25.21■■□□□ 1.63
LCE3D-201ENST00000368787 ATP6V1AP38606 617 aa25.21■■□□□ 1.63
LCE3D-201ENST00000368787 MSL1Q68DK7 614 aa25.21■■□□□ 1.63
LCE3D-201ENST00000368787 ATG3Q9NT62 314 aa25.21■■□□□ 1.63
LCE3D-201ENST00000368787 KDRP35968 1356 aa25.2■■□□□ 1.63
LCE3D-201ENST00000368787 SULT6B1Q6IMI4 303 aa25.2■■□□□ 1.62
LCE3D-201ENST00000368787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms