RNA–Protein interactions for RNA: ENST00000368460.7

PBXIP1-201, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PBXIP1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-201ENST00000368460 QSER1Q2KHR3 1735 aa25.98■■□□□ 1.75
PBXIP1-201ENST00000368460 HOXC9P31274 260 aa25.98■■□□□ 1.75
PBXIP1-201ENST00000368460 C1QTNF8P60827 252 aa25.98■■□□□ 1.75
PBXIP1-201ENST00000368460 ZCRB1Q8TBF4 217 aaKnown RBP25.98■■□□□ 1.75
PBXIP1-201ENST00000368460 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
PBXIP1-201ENST00000368460 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
PBXIP1-201ENST00000368460 SLC24A1O60721 1099 aa25.94■■□□□ 1.74
PBXIP1-201ENST00000368460 USP47Q96K76 1375 aa25.94■■□□□ 1.74
PBXIP1-201ENST00000368460 GIGYF1O75420 1035 aaPredicted RBP25.93■■□□□ 1.74
PBXIP1-201ENST00000368460 TUBGCP6Q96RT7 1819 aa25.92■■□□□ 1.74
PBXIP1-201ENST00000368460 UTRNP46939 3433 aa25.92■■□□□ 1.74
PBXIP1-201ENST00000368460 SMG6Q86US8 1419 aaKnown RBP25.91■■□□□ 1.74
PBXIP1-201ENST00000368460 FBLN1P23142 703 aa25.91■■□□□ 1.74
PBXIP1-201ENST00000368460 RAPGEF4Q8WZA2 1011 aa25.91■■□□□ 1.74
PBXIP1-201ENST00000368460 ST20-MTHFSA0A0A6YYL1 179 aa25.9■■□□□ 1.74
PBXIP1-201ENST00000368460 NLGN2Q8NFZ4 835 aa25.9■■□□□ 1.74
PBXIP1-201ENST00000368460 RGPD2P0DJD1 1756 aa25.9■■□□□ 1.74
PBXIP1-201ENST00000368460 MEGF6O75095 1541 aa25.89■■□□□ 1.74
PBXIP1-201ENST00000368460 LY75O60449 1722 aa25.89■■□□□ 1.74
PBXIP1-201ENST00000368460 RTL1A6NKG5 1358 aa25.89■■□□□ 1.74
PBXIP1-201ENST00000368460 NSD2O96028 1365 aa25.88■■□□□ 1.73
PBXIP1-201ENST00000368460 RRS1Q15050 365 aaKnown RBP25.88■■□□□ 1.73
PBXIP1-201ENST00000368460 CGNL1Q0VF96 1302 aa25.88■■□□□ 1.73
PBXIP1-201ENST00000368460 GRIN3BO60391 1043 aa25.87■■□□□ 1.73
PBXIP1-201ENST00000368460 HMGB2P26583 209 aaKnown RBP25.87■■□□□ 1.73
PBXIP1-201ENST00000368460 USHBP1Q8N6Y0 703 aa25.87■■□□□ 1.73
PBXIP1-201ENST00000368460 COL24A1Q17RW2 1714 aa25.86■■□□□ 1.73
PBXIP1-201ENST00000368460 TATP17735 454 aaPredicted RBP25.86■■□□□ 1.73
PBXIP1-201ENST00000368460 TESK2Q96S53 571 aa25.86■■□□□ 1.73
PBXIP1-201ENST00000368460 NBPF6Q5VWK0 638 aa25.85■■□□□ 1.73
PBXIP1-201ENST00000368460 NBPF4Q96M43 638 aa25.85■■□□□ 1.73
PBXIP1-201ENST00000368460 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
PBXIP1-201ENST00000368460 MSL1Q68DK7 614 aa25.84■■□□□ 1.73
PBXIP1-201ENST00000368460 COL23A1Q86Y22 540 aaPredicted RBP25.84■■□□□ 1.73
PBXIP1-201ENST00000368460 GGNBP2Q9H3C7 697 aa25.84■■□□□ 1.73
PBXIP1-201ENST00000368460 PCDH11XQ9BZA7 1347 aa25.82■■□□□ 1.72
PBXIP1-201ENST00000368460 PCDH11YQ9BZA8 1340 aa25.82■■□□□ 1.72
PBXIP1-201ENST00000368460 TMF1P82094 1093 aa25.81■■□□□ 1.72
PBXIP1-201ENST00000368460 FLAD1Q8NFF5 587 aa25.8■■□□□ 1.72
PBXIP1-201ENST00000368460 FYB1O15117 783 aa25.79■■□□□ 1.72
PBXIP1-201ENST00000368460 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
PBXIP1-201ENST00000368460 MPRIPQ6WCQ1 1025 aa25.79■■□□□ 1.72
PBXIP1-201ENST00000368460 PALLDQ8WX93 1383 aa25.77■■□□□ 1.72
PBXIP1-201ENST00000368460 C5P01031 1676 aa25.77■■□□□ 1.72
PBXIP1-201ENST00000368460 INSRP06213 1382 aa25.75■■□□□ 1.71
PBXIP1-201ENST00000368460 FLT4P35916 1363 aa25.75■■□□□ 1.71
PBXIP1-201ENST00000368460 HSP90AB2PQ58FF8 381 aa25.75■■□□□ 1.71
PBXIP1-201ENST00000368460 AK7Q96M32 723 aa25.75■■□□□ 1.71
PBXIP1-201ENST00000368460 SMARCC1Q92922 1105 aaPredicted RBP25.74■■□□□ 1.71
PBXIP1-201ENST00000368460 CD2APQ9Y5K6 639 aa25.74■■□□□ 1.71
PBXIP1-201ENST00000368460 CDCA8Q53HL2 280 aa25.73■■□□□ 1.71
PBXIP1-201ENST00000368460 KIF20BQ96Q89 1820 aa25.71■■□□□ 1.71
PBXIP1-201ENST00000368460 KIF24Q5T7B8 1368 aa25.7■■□□□ 1.71
PBXIP1-201ENST00000368460 PHF14O94880 888 aa25.7■■□□□ 1.7
PBXIP1-201ENST00000368460 PPM1GO15355 546 aaPredicted RBP25.69■■□□□ 1.7
PBXIP1-201ENST00000368460 GPBP1L1Q9HC44 474 aaPredicted RBP25.69■■□□□ 1.7
PBXIP1-201ENST00000368460 TAF1LQ8IZX4 1826 aa25.69■■□□□ 1.7
PBXIP1-201ENST00000368460 ATP10DQ9P241 1426 aa25.69■■□□□ 1.7
PBXIP1-201ENST00000368460 CYP27B1O15528 508 aa25.68■■□□□ 1.7
PBXIP1-201ENST00000368460 NSD3Q9BZ95 1437 aa25.68■■□□□ 1.7
PBXIP1-201ENST00000368460 C4BP0C0L5 1744 aa25.66■■□□□ 1.7
PBXIP1-201ENST00000368460 SPG7Q9UQ90 795 aa25.66■■□□□ 1.7
PBXIP1-201ENST00000368460 GOLGB1Q14789 3259 aaKnown RBP25.66■■□□□ 1.7
PBXIP1-201ENST00000368460 EMILIN1Q9Y6C2 1016 aa25.65■■□□□ 1.7
PBXIP1-201ENST00000368460 ITGB4P16144 1822 aa25.65■■□□□ 1.7
PBXIP1-201ENST00000368460 ZNF526Q8TF50 670 aaPredicted RBP25.64■■□□□ 1.7
PBXIP1-201ENST00000368460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.63■■□□□ 1.69
PBXIP1-201ENST00000368460 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
PBXIP1-201ENST00000368460 PIGBQ92521 554 aa25.62■■□□□ 1.69
PBXIP1-201ENST00000368460 TMOD3Q9NYL9 352 aa25.62■■□□□ 1.69
PBXIP1-201ENST00000368460 IGSF1Q8N6C5 1336 aa25.62■■□□□ 1.69
PBXIP1-201ENST00000368460 TOGARAM1Q9Y4F4 1720 aa25.61■■□□□ 1.69
PBXIP1-201ENST00000368460 LOC102724428A0A0B4J2F2 783 aa25.6■■□□□ 1.69
PBXIP1-201ENST00000368460 SSFA2P28290 1259 aa25.6■■□□□ 1.69
PBXIP1-201ENST00000368460 SIK1P57059 783 aa25.6■■□□□ 1.69
PBXIP1-201ENST00000368460 PKD1L3Q7Z443 1732 aa25.6■■□□□ 1.69
PBXIP1-201ENST00000368460 UBR3Q6ZT12 1888 aa25.59■■□□□ 1.69
PBXIP1-201ENST00000368460 SMIM5Q71RC9 77 aa25.58■■□□□ 1.69
PBXIP1-201ENST00000368460 GNPATO15228 680 aa25.57■■□□□ 1.68
PBXIP1-201ENST00000368460 NKX1-1Q15270 411 aaPredicted RBP25.57■■□□□ 1.68
PBXIP1-201ENST00000368460 ATP6V1AP38606 617 aa25.56■■□□□ 1.68
PBXIP1-201ENST00000368460 AMIGO3Q86WK7 504 aa25.56■■□□□ 1.68
PBXIP1-201ENST00000368460 LINC00116Q8NCU8 138 aa25.56■■□□□ 1.68
PBXIP1-201ENST00000368460 CARD14Q9BXL6 1004 aa25.55■■□□□ 1.68
PBXIP1-201ENST00000368460 IFNL2Q8IZJ0 200 aa25.54■■□□□ 1.68
PBXIP1-201ENST00000368460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.54■■□□□ 1.68
PBXIP1-201ENST00000368460 IFFO2Q5TF58 517 aa25.53■■□□□ 1.68
PBXIP1-201ENST00000368460 EYA1Q99502 592 aa25.53■■□□□ 1.68
PBXIP1-201ENST00000368460 ASAP1Q9ULH1 1129 aa25.53■■□□□ 1.68
PBXIP1-201ENST00000368460 WASHC2AQ641Q2 1341 aa25.53■■□□□ 1.68
PBXIP1-201ENST00000368460 ADCY9O60503 1353 aa25.53■■□□□ 1.68
PBXIP1-201ENST00000368460 HSPA6P17066 643 aa25.51■■□□□ 1.67
PBXIP1-201ENST00000368460 POLR3GLQ9BT43 218 aa25.51■■□□□ 1.67
PBXIP1-201ENST00000368460 NCAPD2Q15021 1401 aa25.51■■□□□ 1.67
PBXIP1-201ENST00000368460 MAP2P11137 1827 aaKnown RBP25.5■■□□□ 1.67
PBXIP1-201ENST00000368460 PHKG2P15735 406 aa25.5■■□□□ 1.67
PBXIP1-201ENST00000368460 MMP10P09238 476 aa25.49■■□□□ 1.67
PBXIP1-201ENST00000368460 ITPK1Q13572 414 aa25.49■■□□□ 1.67
PBXIP1-201ENST00000368460 RTCBQ9Y3I0 505 aaKnown RBP25.48■■□□□ 1.67
PBXIP1-201ENST00000368460 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms